RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 HOXB7P09629 217 aa22.7■■□□□ 1.22
PSEN1-218ENST00000556864 TFCP2L1Q9NZI6 479 aa22.7■■□□□ 1.22
PSEN1-218ENST00000556864 SOS1Q07889 1333 aaPredicted RBP22.7■■□□□ 1.22
PSEN1-218ENST00000556864 TUBGCP6Q96RT7 1819 aa22.7■■□□□ 1.22
PSEN1-218ENST00000556864 ZBED9Q6R2W3 1325 aa22.69■■□□□ 1.22
PSEN1-218ENST00000556864 TSR2Q969E8 191 aaKnown RBP22.69■■□□□ 1.22
PSEN1-218ENST00000556864 SSFA2P28290 1259 aa22.68■■□□□ 1.22
PSEN1-218ENST00000556864 FLAD1Q8NFF5 587 aa22.68■■□□□ 1.22
PSEN1-218ENST00000556864 UBR3Q6ZT12 1888 aa22.68■■□□□ 1.22
PSEN1-218ENST00000556864 ERBB4Q15303 1308 aa22.67■■□□□ 1.22
PSEN1-218ENST00000556864 R3HDM1Q15032 1099 aaKnown RBP22.67■■□□□ 1.22
PSEN1-218ENST00000556864 CHMP4AQ9BY43 222 aa22.67■■□□□ 1.22
PSEN1-218ENST00000556864 RTCBQ9Y3I0 505 aaKnown RBP22.67■■□□□ 1.22
PSEN1-218ENST00000556864 ADRA2BP18089 450 aa22.66■■□□□ 1.22
PSEN1-218ENST00000556864 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
PSEN1-218ENST00000556864 ZBTB1Q9Y2K1 713 aa22.65■■□□□ 1.22
PSEN1-218ENST00000556864 CASZ1Q86V15 1759 aa22.65■■□□□ 1.22
PSEN1-218ENST00000556864 RPS6KA4O75676 772 aa22.64■■□□□ 1.21
PSEN1-218ENST00000556864 DUSP27Q5VZP5 1158 aa22.64■■□□□ 1.21
PSEN1-218ENST00000556864 INTS5Q6P9B9 1019 aaKnown RBP22.64■■□□□ 1.21
PSEN1-218ENST00000556864 NPM2Q86SE8 214 aaKnown RBP22.64■■□□□ 1.21
PSEN1-218ENST00000556864 USP16Q9Y5T5 823 aa22.64■■□□□ 1.21
PSEN1-218ENST00000556864 COL15A1P39059 1388 aa22.63■■□□□ 1.21
PSEN1-218ENST00000556864 PNPLA7Q6ZV29 1317 aa22.63■■□□□ 1.21
PSEN1-218ENST00000556864 PSDA5PKW4 1024 aaPredicted RBP22.63■■□□□ 1.21
PSEN1-218ENST00000556864 PHF14O94880 888 aa22.63■■□□□ 1.21
PSEN1-218ENST00000556864 KRT24Q2M2I5 525 aa22.63■■□□□ 1.21
PSEN1-218ENST00000556864 HDGFL1Q5TGJ6 251 aa22.63■■□□□ 1.21
PSEN1-218ENST00000556864 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.62■■□□□ 1.21
PSEN1-218ENST00000556864 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
PSEN1-218ENST00000556864 SLFN5Q08AF3 891 aa22.62■■□□□ 1.21
PSEN1-218ENST00000556864 SPINK5Q9NQ38 1064 aaPredicted RBP22.62■■□□□ 1.21
PSEN1-218ENST00000556864 A0A087WZG4 1122 aa22.61■■□□□ 1.21
PSEN1-218ENST00000556864 C4AP0C0L4 1744 aa22.61■■□□□ 1.21
PSEN1-218ENST00000556864 IL6STP40189 918 aaPredicted RBP22.61■■□□□ 1.21
PSEN1-218ENST00000556864 TWISTNBQ3B726 338 aaPredicted RBP22.61■■□□□ 1.21
PSEN1-218ENST00000556864 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
PSEN1-218ENST00000556864 MSH5O43196 834 aa22.6■■□□□ 1.21
PSEN1-218ENST00000556864 A1BGP04217 495 aa22.6■■□□□ 1.21
PSEN1-218ENST00000556864 EIF2S2P20042 333 aaKnown RBP22.6■■□□□ 1.21
PSEN1-218ENST00000556864 C8orf58Q8NAV2 365 aa22.6■■□□□ 1.21
PSEN1-218ENST00000556864 SCN7AQ01118 1682 aa22.59■■□□□ 1.21
PSEN1-218ENST00000556864 EXOSC9Q06265 439 aaKnown RBP22.59■■□□□ 1.21
PSEN1-218ENST00000556864 TRAPPC3LQ5T215 181 aa22.59■■□□□ 1.21
PSEN1-218ENST00000556864 ZNF330Q9Y3S2 320 aaPredicted RBP22.59■■□□□ 1.21
PSEN1-218ENST00000556864 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-218ENST00000556864 EIF5P55010 431 aaKnown RBP22.57■■□□□ 1.2
PSEN1-218ENST00000556864 CCDC30Q5VVM6 783 aa22.57■■□□□ 1.2
PSEN1-218ENST00000556864 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-218ENST00000556864 SLC16A10Q8TF71 515 aa22.57■■□□□ 1.2
PSEN1-218ENST00000556864 CDCA7LQ96GN5 454 aa22.57■■□□□ 1.2
PSEN1-218ENST00000556864 RFC4P35249 363 aa22.56■■□□□ 1.2
PSEN1-218ENST00000556864 AMIGO3Q86WK7 504 aa22.56■■□□□ 1.2
PSEN1-218ENST00000556864 TSPYL6Q8N831 410 aa22.56■■□□□ 1.2
PSEN1-218ENST00000556864 NECTIN2Q92692 538 aa22.56■■□□□ 1.2
PSEN1-218ENST00000556864 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
PSEN1-218ENST00000556864 NBPF26B4DH59 902 aa22.55■■□□□ 1.2
PSEN1-218ENST00000556864 NBPF10Q6P3W6 841 aaKnown RBP22.55■■□□□ 1.2
PSEN1-218ENST00000556864 NBPF15Q8N660 670 aa22.55■■□□□ 1.2
PSEN1-218ENST00000556864 STK31Q9BXU1 1019 aa22.55■■□□□ 1.2
PSEN1-218ENST00000556864 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
PSEN1-218ENST00000556864 USP42Q9H9J4 1324 aaKnown RBP22.55■■□□□ 1.2
PSEN1-218ENST00000556864 BCORQ6W2J9 1755 aa22.54■■□□□ 1.2
PSEN1-218ENST00000556864 PIP4K2AP48426 406 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-218ENST00000556864 TRMT2AQ8IZ69 625 aaKnown RBP22.54■■□□□ 1.2
PSEN1-218ENST00000556864 ARHGEF1Q92888 912 aaKnown RBP22.54■■□□□ 1.2
PSEN1-218ENST00000556864 CHPF2Q9P2E5 772 aa22.54■■□□□ 1.2
PSEN1-218ENST00000556864 ZPR1O75312 459 aa22.53■■□□□ 1.2
PSEN1-218ENST00000556864 MYL6BP14649 208 aa22.53■■□□□ 1.2
PSEN1-218ENST00000556864 CT47B1P0C2W7 299 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-218ENST00000556864 KIF6Q6ZMV9 814 aa22.52■■□□□ 1.2
PSEN1-218ENST00000556864 SMIM5Q71RC9 77 aa22.52■■□□□ 1.2
PSEN1-218ENST00000556864 DZIP3Q86Y13 1208 aaKnown RBP22.52■■□□□ 1.2
PSEN1-218ENST00000556864 MTFR1LQ9H019 292 aa22.52■■□□□ 1.2
PSEN1-218ENST00000556864 ZNF428Q96B54 188 aa22.51■■□□□ 1.19
PSEN1-218ENST00000556864 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
PSEN1-218ENST00000556864 HYPKQ9NX55 129 aa22.51■■□□□ 1.19
PSEN1-218ENST00000556864 NARFQ9UHQ1 456 aa22.51■■□□□ 1.19
PSEN1-218ENST00000556864 VAMP4O75379 141 aa22.5■■□□□ 1.19
PSEN1-218ENST00000556864 PDIA6Q15084 440 aa22.5■■□□□ 1.19
PSEN1-218ENST00000556864 ARXQ96QS3 562 aa22.5■■□□□ 1.19
PSEN1-218ENST00000556864 PDGFDQ9GZP0 370 aaPredicted RBP22.5■■□□□ 1.19
PSEN1-218ENST00000556864 RGL2O15211 777 aa22.49■■□□□ 1.19
PSEN1-218ENST00000556864 ZBTB7AO95365 584 aa22.49■■□□□ 1.19
PSEN1-218ENST00000556864 PROSER3Q2NL68 480 aa22.49■■□□□ 1.19
PSEN1-218ENST00000556864 USPL1Q5W0Q7 1092 aa22.48■■□□□ 1.19
PSEN1-218ENST00000556864 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
PSEN1-218ENST00000556864 ZNF652Q9Y2D9 606 aa22.48■■□□□ 1.19
PSEN1-218ENST00000556864 LRP5O75197 1615 aa22.48■■□□□ 1.19
PSEN1-218ENST00000556864 COL24A1Q17RW2 1714 aa22.48■■□□□ 1.19
PSEN1-218ENST00000556864 ANXA1P04083 346 aa22.47■■□□□ 1.19
PSEN1-218ENST00000556864 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
PSEN1-218ENST00000556864 SPON1Q9HCB6 807 aa22.47■■□□□ 1.19
PSEN1-218ENST00000556864 TBC1D2BQ9UPU7 963 aa22.47■■□□□ 1.19
PSEN1-218ENST00000556864 CAMTA2O94983 1202 aa22.46■■□□□ 1.19
PSEN1-218ENST00000556864 GYS1P13807 737 aa22.46■■□□□ 1.19
PSEN1-218ENST00000556864 NLGN1Q8N2Q7 840 aa22.46■■□□□ 1.19
PSEN1-218ENST00000556864 MAP3K15Q6ZN16 1313 aa22.46■■□□□ 1.19
PSEN1-218ENST00000556864 POLD1P28340 1107 aa22.45■■□□□ 1.18
PSEN1-218ENST00000556864 MSL1Q68DK7 614 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms