RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 SIPA1L3O60292 1781 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-217ENST00000556533 ADRA2BP18089 450 aa22.36■■□□□ 1.17
PSEN1-217ENST00000556533 DIEXFQ68CQ4 756 aaKnown RBP22.36■■□□□ 1.17
PSEN1-217ENST00000556533 ARXQ96QS3 562 aa22.36■■□□□ 1.17
PSEN1-217ENST00000556533 ZNF330Q9Y3S2 320 aaPredicted RBP22.36■■□□□ 1.17
PSEN1-217ENST00000556533 DLG5Q8TDM6 1919 aa22.35■■□□□ 1.17
PSEN1-217ENST00000556533 TJP1Q07157 1748 aa22.35■■□□□ 1.17
PSEN1-217ENST00000556533 A1BGP04217 495 aa22.35■■□□□ 1.17
PSEN1-217ENST00000556533 EIF4A1P60842 406 aaKnown RBP22.35■■□□□ 1.17
PSEN1-217ENST00000556533 SGIP1Q9BQI5 828 aa22.35■■□□□ 1.17
PSEN1-217ENST00000556533 TUBGCP6Q96RT7 1819 aa22.35■■□□□ 1.17
PSEN1-217ENST00000556533 KLHL34Q8N239 644 aa22.34■■□□□ 1.17
PSEN1-217ENST00000556533 SRP68Q9UHB9 627 aaKnown RBP22.34■■□□□ 1.17
PSEN1-217ENST00000556533 SOS1Q07889 1333 aaPredicted RBP22.33■■□□□ 1.17
PSEN1-217ENST00000556533 SALL2Q9Y467 1007 aaPredicted RBP22.33■■□□□ 1.17
PSEN1-217ENST00000556533 QSER1Q2KHR3 1735 aa22.32■■□□□ 1.16
PSEN1-217ENST00000556533 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
PSEN1-217ENST00000556533 NPM2Q86SE8 214 aaKnown RBP22.32■■□□□ 1.16
PSEN1-217ENST00000556533 BABAM1Q9NWV8 329 aa22.32■■□□□ 1.16
PSEN1-217ENST00000556533 COL5A3P25940 1745 aaPredicted RBP22.31■■□□□ 1.16
PSEN1-217ENST00000556533 UBR2Q8IWV8 1755 aa22.31■■□□□ 1.16
PSEN1-217ENST00000556533 CHL1O00533 1208 aa22.31■■□□□ 1.16
PSEN1-217ENST00000556533 ZPR1O75312 459 aa22.31■■□□□ 1.16
PSEN1-217ENST00000556533 GIGYF1O75420 1035 aaPredicted RBP22.31■■□□□ 1.16
PSEN1-217ENST00000556533 UBR3Q6ZT12 1888 aa22.3■■□□□ 1.16
PSEN1-217ENST00000556533 FHDC1Q9C0D6 1143 aaPredicted RBP22.3■■□□□ 1.16
PSEN1-217ENST00000556533 CALD1Q05682 793 aaKnown RBP22.29■■□□□ 1.16
PSEN1-217ENST00000556533 NLGN1Q8N2Q7 840 aa22.29■■□□□ 1.16
PSEN1-217ENST00000556533 COL15A1P39059 1388 aa22.28■■□□□ 1.16
PSEN1-217ENST00000556533 GYS1P13807 737 aa22.28■■□□□ 1.16
PSEN1-217ENST00000556533 EIF5P55010 431 aaKnown RBP22.28■■□□□ 1.16
PSEN1-217ENST00000556533 USPL1Q5W0Q7 1092 aa22.28■■□□□ 1.16
PSEN1-217ENST00000556533 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
PSEN1-217ENST00000556533 USP42Q9H9J4 1324 aaKnown RBP22.28■■□□□ 1.16
PSEN1-217ENST00000556533 MYH14Q7Z406 1995 aaKnown RBP22.27■■□□□ 1.16
PSEN1-217ENST00000556533 A0A087WZG4 1122 aa22.27■■□□□ 1.16
PSEN1-217ENST00000556533 MMP10P09238 476 aa22.27■■□□□ 1.16
PSEN1-217ENST00000556533 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
PSEN1-217ENST00000556533 TBC1D2BQ9UPU7 963 aa22.27■■□□□ 1.16
PSEN1-217ENST00000556533 CICQ96RK0 1608 aaPredicted RBP22.27■■□□□ 1.16
PSEN1-217ENST00000556533 CCER2I3L3R5 266 aa22.26■■□□□ 1.15
PSEN1-217ENST00000556533 EIF2S2P20042 333 aaKnown RBP22.26■■□□□ 1.15
PSEN1-217ENST00000556533 FKBP8Q14318 412 aa22.26■■□□□ 1.15
PSEN1-217ENST00000556533 MIER1Q8N108 512 aa22.26■■□□□ 1.15
PSEN1-217ENST00000556533 NARFQ9UHQ1 456 aa22.26■■□□□ 1.15
PSEN1-217ENST00000556533 GNAI1P63096 354 aa22.25■■□□□ 1.15
PSEN1-217ENST00000556533 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
PSEN1-217ENST00000556533 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
PSEN1-217ENST00000556533 NGEFQ8N5V2 710 aa22.25■■□□□ 1.15
PSEN1-217ENST00000556533 MBIPQ9NS73 344 aa22.25■■□□□ 1.15
PSEN1-217ENST00000556533 NBPF26B4DH59 902 aa22.24■■□□□ 1.15
PSEN1-217ENST00000556533 NBPF10Q6P3W6 841 aaKnown RBP22.24■■□□□ 1.15
PSEN1-217ENST00000556533 NBPF15Q8N660 670 aa22.24■■□□□ 1.15
PSEN1-217ENST00000556533 NECTIN2Q92692 538 aa22.24■■□□□ 1.15
PSEN1-217ENST00000556533 SYT17Q9BSW7 474 aa22.24■■□□□ 1.15
PSEN1-217ENST00000556533 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
PSEN1-217ENST00000556533 CCDC27Q2M243 656 aa22.23■■□□□ 1.15
PSEN1-217ENST00000556533 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
PSEN1-217ENST00000556533 MYL6BP14649 208 aa22.22■■□□□ 1.15
PSEN1-217ENST00000556533 PARP3Q9Y6F1 533 aa22.22■■□□□ 1.15
PSEN1-217ENST00000556533 KDM3BQ7LBC6 1761 aa22.21■■□□□ 1.15
PSEN1-217ENST00000556533 DZIP3Q86Y13 1208 aaKnown RBP22.21■■□□□ 1.15
PSEN1-217ENST00000556533 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
PSEN1-217ENST00000556533 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
PSEN1-217ENST00000556533 ELL2O00472 640 aaPredicted RBP22.19■■□□□ 1.14
PSEN1-217ENST00000556533 TSR2Q969E8 191 aaKnown RBP22.19■■□□□ 1.14
PSEN1-217ENST00000556533 NCBP3Q53F19 620 aaKnown RBP22.18■■□□□ 1.14
PSEN1-217ENST00000556533 DUSP27Q5VZP5 1158 aa22.18■■□□□ 1.14
PSEN1-217ENST00000556533 TM4SF1P30408 202 aa22.17■■□□□ 1.14
PSEN1-217ENST00000556533 DDR1Q08345 913 aa22.17■■□□□ 1.14
PSEN1-217ENST00000556533 NFIXQ14938 502 aa22.17■■□□□ 1.14
PSEN1-217ENST00000556533 NLGN2Q8NFZ4 835 aa22.17■■□□□ 1.14
PSEN1-217ENST00000556533 CAMTA2O94983 1202 aa22.16■■□□□ 1.14
PSEN1-217ENST00000556533 ANXA1P04083 346 aa22.16■■□□□ 1.14
PSEN1-217ENST00000556533 CD2APQ9Y5K6 639 aa22.16■■□□□ 1.14
PSEN1-217ENST00000556533 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
PSEN1-217ENST00000556533 HDGFL1Q5TGJ6 251 aa22.15■■□□□ 1.14
PSEN1-217ENST00000556533 TBC1D9BQ66K14 1250 aa22.15■■□□□ 1.14
PSEN1-217ENST00000556533 WDR63Q8IWG1 891 aa22.15■■□□□ 1.14
PSEN1-217ENST00000556533 C8orf58Q8NAV2 365 aa22.15■■□□□ 1.14
PSEN1-217ENST00000556533 C4AP0C0L4 1744 aa22.14■■□□□ 1.14
PSEN1-217ENST00000556533 PROSER3Q2NL68 480 aa22.14■■□□□ 1.13
PSEN1-217ENST00000556533 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
PSEN1-217ENST00000556533 COL24A1Q17RW2 1714 aa22.14■■□□□ 1.13
PSEN1-217ENST00000556533 IL16Q14005 1332 aa22.13■■□□□ 1.13
PSEN1-217ENST00000556533 ERBB4Q15303 1308 aa22.13■■□□□ 1.13
PSEN1-217ENST00000556533 POLRMTO00411 1230 aaKnown RBP22.13■■□□□ 1.13
PSEN1-217ENST00000556533 PDIA6Q15084 440 aa22.13■■□□□ 1.13
PSEN1-217ENST00000556533 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
PSEN1-217ENST00000556533 TTLL7Q6ZT98 887 aa22.13■■□□□ 1.13
PSEN1-217ENST00000556533 HOXB7P09629 217 aa22.12■■□□□ 1.13
PSEN1-217ENST00000556533 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
PSEN1-217ENST00000556533 SERPINB2P05120 415 aa22.11■■□□□ 1.13
PSEN1-217ENST00000556533 AIMP1Q12904 312 aaKnown RBP22.11■■□□□ 1.13
PSEN1-217ENST00000556533 SETDB2Q96T68 719 aa22.11■■□□□ 1.13
PSEN1-217ENST00000556533 ZBTB3Q9H5J0 574 aa22.11■■□□□ 1.13
PSEN1-217ENST00000556533 CHPF2Q9P2E5 772 aa22.11■■□□□ 1.13
PSEN1-217ENST00000556533 HLFQ16534 295 aa22.1■■□□□ 1.13
PSEN1-217ENST00000556533 TSPYL6Q8N831 410 aa22.1■■□□□ 1.13
PSEN1-217ENST00000556533 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms