RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 A1BGP04217 495 aa10.75□□□□□ -0.69
VTI1B-206ENST00000556461 CD2APQ9Y5K6 639 aa10.75□□□□□ -0.69
VTI1B-206ENST00000556461 MAPK8IP3Q9UPT6 1336 aa10.75□□□□□ -0.69
VTI1B-206ENST00000556461 YBX3P16989 372 aaKnown RBP eCLIP10.74□□□□□ -0.694e-11■■□□□ 11.8
VTI1B-206ENST00000556461 PIP4K2AP48426 406 aaPredicted RBP10.74□□□□□ -0.69
VTI1B-206ENST00000556461 EIF5P55010 431 aaKnown RBP10.74□□□□□ -0.69
VTI1B-206ENST00000556461 DDR1Q08345 913 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 TAF7Q15545 349 aaPredicted RBP10.74□□□□□ -0.69
VTI1B-206ENST00000556461 CCDC184Q52MB2 194 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 USPL1Q5W0Q7 1092 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 PELP1Q8IZL8 1130 aaKnown RBP10.74□□□□□ -0.69
VTI1B-206ENST00000556461 NLGN1Q8N2Q7 840 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 BCL2L12Q9HB09 334 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 WWC3Q9ULE0 1092 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 ADAMTS8Q9UP79 889 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 RRP7AQ9Y3A4 280 aaKnown RBP10.74□□□□□ -0.69
VTI1B-206ENST00000556461 USP16Q9Y5T5 823 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 COL15A1P39059 1388 aa10.74□□□□□ -0.69
VTI1B-206ENST00000556461 DCAF8L1A6NGE4 600 aa10.73□□□□□ -0.69
VTI1B-206ENST00000556461 STARD3NLO95772 234 aa10.73□□□□□ -0.69
VTI1B-206ENST00000556461 NEFMP07197 916 aa10.73□□□□□ -0.69
VTI1B-206ENST00000556461 TMPOP42166 694 aaKnown RBP10.73□□□□□ -0.69
VTI1B-206ENST00000556461 RIPK4P57078 832 aa10.73□□□□□ -0.69
VTI1B-206ENST00000556461 GPR162Q16538 588 aa10.73□□□□□ -0.69
VTI1B-206ENST00000556461 NARFQ9UHQ1 456 aa10.73□□□□□ -0.69
VTI1B-206ENST00000556461 DLG5Q8TDM6 1919 aa10.73□□□□□ -0.69
VTI1B-206ENST00000556461 TM4SF1P30408 202 aa10.72□□□□□ -0.69
VTI1B-206ENST00000556461 PNNQ9H307 717 aaKnown RBP10.72□□□□□ -0.69
VTI1B-206ENST00000556461 POLRMTO00411 1230 aaKnown RBP10.71□□□□□ -0.69
VTI1B-206ENST00000556461 ZPR1O75312 459 aa10.71□□□□□ -0.69
VTI1B-206ENST00000556461 SNRPA1P09661 255 aaKnown RBP10.71□□□□□ -0.69
VTI1B-206ENST00000556461 YY1P25490 414 aa10.71□□□□□ -0.69
VTI1B-206ENST00000556461 NFIXQ14938 502 aa10.71□□□□□ -0.69
VTI1B-206ENST00000556461 WDR43Q15061 677 aaKnown RBP eCLIP10.71□□□□□ -0.69
VTI1B-206ENST00000556461 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
VTI1B-206ENST00000556461 C10orf71Q711Q0 1435 aa10.71□□□□□ -0.69
VTI1B-206ENST00000556461 TEX13AQ9BXU3 409 aaPredicted RBP10.71□□□□□ -0.69
VTI1B-206ENST00000556461 PARP3Q9Y6F1 533 aa10.71□□□□□ -0.69
VTI1B-206ENST00000556461 PXDNLA1KZ92 1463 aa10.7□□□□□ -0.7
VTI1B-206ENST00000556461 NBPF26B4DH59 902 aa10.7□□□□□ -0.7
VTI1B-206ENST00000556461 IL6STP40189 918 aaPredicted RBP10.7□□□□□ -0.7
VTI1B-206ENST00000556461 EIF4A1P60842 406 aaKnown RBP10.7□□□□□ -0.7
VTI1B-206ENST00000556461 NBPF10Q6P3W6 841 aaKnown RBP10.7□□□□□ -0.7
VTI1B-206ENST00000556461 NBPF15Q8N660 670 aa10.7□□□□□ -0.7
VTI1B-206ENST00000556461 RUNDC1Q96C34 613 aa10.7□□□□□ -0.7
VTI1B-206ENST00000556461 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
VTI1B-206ENST00000556461 TBC1D2BQ9UPU7 963 aa10.7□□□□□ -0.7
VTI1B-206ENST00000556461 ZNF330Q9Y3S2 320 aaPredicted RBP10.7□□□□□ -0.7
VTI1B-206ENST00000556461 A0A0G2JLW4 131 aa10.69□□□□□ -0.7
VTI1B-206ENST00000556461 DPEP1P16444 411 aa10.69□□□□□ -0.7
VTI1B-206ENST00000556461 KDM3BQ7LBC6 1761 aa10.69□□□□□ -0.7
VTI1B-206ENST00000556461 KIAA1551Q9HCM1 1747 aa10.69□□□□□ -0.7
VTI1B-206ENST00000556461 A0A087WZG4 1122 aa10.68□□□□□ -0.7
VTI1B-206ENST00000556461 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
VTI1B-206ENST00000556461 CAMTA2O94983 1202 aa10.68□□□□□ -0.7
VTI1B-206ENST00000556461 KCNA3P22001 575 aa10.68□□□□□ -0.7
VTI1B-206ENST00000556461 TBC1D9BQ66K14 1250 aa10.68□□□□□ -0.7
VTI1B-206ENST00000556461 BICDL1Q6ZP65 573 aa10.68□□□□□ -0.7
VTI1B-206ENST00000556461 PNISRQ8TF01 805 aaKnown RBP10.68□□□□□ -0.7
VTI1B-206ENST00000556461 TSPYL4Q9UJ04 414 aa10.68□□□□□ -0.7
VTI1B-206ENST00000556461 SENP3-EIF4A1A0A087X0R7 540 aa10.67□□□□□ -0.7
VTI1B-206ENST00000556461 KIF13BQ9NQT8 1826 aa10.67□□□□□ -0.7
VTI1B-206ENST00000556461 CARMIL3Q8ND23 1372 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 APAF1O14727 1248 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 SERPINB2P05120 415 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 CHRNA5P30532 468 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 TGFB2P61812 414 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 KRT24Q2M2I5 525 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 DZIP3Q86Y13 1208 aaKnown RBP10.66□□□□□ -0.7
VTI1B-206ENST00000556461 CCDC24Q8N4L8 307 aa10.66□□□□□ -0.7
VTI1B-206ENST00000556461 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
VTI1B-206ENST00000556461 GRIN3BO60391 1043 aa10.65□□□□□ -0.7
VTI1B-206ENST00000556461 NGEFQ8N5V2 710 aa10.65□□□□□ -0.7
VTI1B-206ENST00000556461 SCN7AQ01118 1682 aa10.65□□□□□ -0.7
VTI1B-206ENST00000556461 AFDNP55196 1824 aaKnown RBP10.64□□□□□ -0.71
VTI1B-206ENST00000556461 CHL1O00533 1208 aa10.64□□□□□ -0.71
VTI1B-206ENST00000556461 HLFQ16534 295 aa10.64□□□□□ -0.71
VTI1B-206ENST00000556461 TTLL7Q6ZT98 887 aa10.64□□□□□ -0.71
VTI1B-206ENST00000556461 ZNF784Q8NCA9 323 aaPredicted RBP10.64□□□□□ -0.71
VTI1B-206ENST00000556461 BCS1LQ9Y276 419 aa10.64□□□□□ -0.71
VTI1B-206ENST00000556461 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
VTI1B-206ENST00000556461 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
VTI1B-206ENST00000556461 ANP32CO43423 234 aa10.63□□□□□ -0.71
VTI1B-206ENST00000556461 ANXA1P04083 346 aa10.63□□□□□ -0.71
VTI1B-206ENST00000556461 MYL6BP14649 208 aa10.63□□□□□ -0.71
VTI1B-206ENST00000556461 PDIA6Q15084 440 aa10.63□□□□□ -0.71
VTI1B-206ENST00000556461 PROSER3Q2NL68 480 aa10.63□□□□□ -0.71
VTI1B-206ENST00000556461 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
VTI1B-206ENST00000556461 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 EIF2S2P20042 333 aaKnown RBP10.62□□□□□ -0.71
VTI1B-206ENST00000556461 PRR5LQ6MZQ0 368 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 LRP10Q7Z4F1 713 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 NPM2Q86SE8 214 aaKnown RBP10.62□□□□□ -0.71
VTI1B-206ENST00000556461 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 SETDB2Q96T68 719 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 MRS2Q9HD23 443 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 CHD4Q14839 1912 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 BCORQ6W2J9 1755 aa10.62□□□□□ -0.71
VTI1B-206ENST00000556461 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms