RNA–Protein interactions for RNA: ENST00000556216.5

CGRRF1-204, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-204ENST00000556216 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
CGRRF1-204ENST00000556216 HTATSF1O43719 755 aaKnown RBP19.63■□□□□ 0.73
CGRRF1-204ENST00000556216 NEFMP07197 916 aa19.62■□□□□ 0.73
CGRRF1-204ENST00000556216 NLGN1Q8N2Q7 840 aa19.62■□□□□ 0.73
CGRRF1-204ENST00000556216 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
CGRRF1-204ENST00000556216 MAPK8IP3Q9UPT6 1336 aa19.62■□□□□ 0.73
CGRRF1-204ENST00000556216 USPL1Q5W0Q7 1092 aa19.62■□□□□ 0.73
CGRRF1-204ENST00000556216 USP16Q9Y5T5 823 aa19.62■□□□□ 0.73
CGRRF1-204ENST00000556216 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
CGRRF1-204ENST00000556216 PIP4K2AP48426 406 aaPredicted RBP19.61■□□□□ 0.73
CGRRF1-204ENST00000556216 GPR162Q16538 588 aa19.61■□□□□ 0.73
CGRRF1-204ENST00000556216 CD2APQ9Y5K6 639 aa19.61■□□□□ 0.73
CGRRF1-204ENST00000556216 A1BGP04217 495 aa19.6■□□□□ 0.73
CGRRF1-204ENST00000556216 YBX3P16989 372 aaKnown RBP eCLIP19.6■□□□□ 0.73
CGRRF1-204ENST00000556216 TAF7Q15545 349 aaPredicted RBP19.6■□□□□ 0.73
CGRRF1-204ENST00000556216 ADAMTS8Q9UP79 889 aa19.6■□□□□ 0.73
CGRRF1-204ENST00000556216 RRP7AQ9Y3A4 280 aaKnown RBP19.6■□□□□ 0.73
CGRRF1-204ENST00000556216 COL15A1P39059 1388 aa19.6■□□□□ 0.73
CGRRF1-204ENST00000556216 STARD3NLO95772 234 aa19.6■□□□□ 0.73
CGRRF1-204ENST00000556216 RIPK4P57078 832 aa19.59■□□□□ 0.73
CGRRF1-204ENST00000556216 DDR1Q08345 913 aa19.59■□□□□ 0.73
CGRRF1-204ENST00000556216 CCDC184Q52MB2 194 aa19.59■□□□□ 0.73
CGRRF1-204ENST00000556216 BCL2L12Q9HB09 334 aa19.59■□□□□ 0.73
CGRRF1-204ENST00000556216 EIF5P55010 431 aaKnown RBP19.58■□□□□ 0.73
CGRRF1-204ENST00000556216 PNNQ9H307 717 aaKnown RBP19.58■□□□□ 0.73
CGRRF1-204ENST00000556216 ZNF330Q9Y3S2 320 aaPredicted RBP19.58■□□□□ 0.73
CGRRF1-204ENST00000556216 ZPR1O75312 459 aa19.58■□□□□ 0.72
CGRRF1-204ENST00000556216 YY1P25490 414 aa19.58■□□□□ 0.72
CGRRF1-204ENST00000556216 NEUROD2Q15784 382 aa19.58■□□□□ 0.72
CGRRF1-204ENST00000556216 NARFQ9UHQ1 456 aa19.58■□□□□ 0.72
CGRRF1-204ENST00000556216 TMPOP42166 694 aaKnown RBP19.57■□□□□ 0.72
CGRRF1-204ENST00000556216 WDR43Q15061 677 aaKnown RBP eCLIP19.56■□□□□ 0.72
CGRRF1-204ENST00000556216 N4BP2Q86UW6 1770 aaPredicted RBP19.56■□□□□ 0.72
CGRRF1-204ENST00000556216 TEX13AQ9BXU3 409 aaPredicted RBP19.55■□□□□ 0.72
CGRRF1-204ENST00000556216 TBC1D2BQ9UPU7 963 aa19.55■□□□□ 0.72
CGRRF1-204ENST00000556216 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
CGRRF1-204ENST00000556216 KDM3BQ7LBC6 1761 aa19.55■□□□□ 0.72
CGRRF1-204ENST00000556216 KIF13BQ9NQT8 1826 aa19.55■□□□□ 0.72
CGRRF1-204ENST00000556216 TM4SF1P30408 202 aa19.55■□□□□ 0.72
CGRRF1-204ENST00000556216 KIAA1551Q9HCM1 1747 aa19.54■□□□□ 0.72
CGRRF1-204ENST00000556216 SNRPA1P09661 255 aaKnown RBP19.54■□□□□ 0.72
CGRRF1-204ENST00000556216 CHD4Q14839 1912 aa19.54■□□□□ 0.72
CGRRF1-204ENST00000556216 POLRMTO00411 1230 aaKnown RBP19.53■□□□□ 0.72
CGRRF1-204ENST00000556216 NFIXQ14938 502 aa19.53■□□□□ 0.72
CGRRF1-204ENST00000556216 C10orf71Q711Q0 1435 aa19.53■□□□□ 0.72
CGRRF1-204ENST00000556216 A0A0G2JLW4 131 aa19.53■□□□□ 0.72
CGRRF1-204ENST00000556216 RUNDC1Q96C34 613 aa19.53■□□□□ 0.72
CGRRF1-204ENST00000556216 NBPF26B4DH59 902 aa19.52■□□□□ 0.72
CGRRF1-204ENST00000556216 IL6STP40189 918 aaPredicted RBP19.52■□□□□ 0.72
CGRRF1-204ENST00000556216 EIF4A1P60842 406 aaKnown RBP19.52■□□□□ 0.72
CGRRF1-204ENST00000556216 NBPF10Q6P3W6 841 aaKnown RBP19.52■□□□□ 0.72
CGRRF1-204ENST00000556216 NBPF15Q8N660 670 aa19.52■□□□□ 0.72
CGRRF1-204ENST00000556216 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
CGRRF1-204ENST00000556216 PXDNLA1KZ92 1463 aa19.52■□□□□ 0.72
CGRRF1-204ENST00000556216 BICDL1Q6ZP65 573 aa19.51■□□□□ 0.71
CGRRF1-204ENST00000556216 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
CGRRF1-204ENST00000556216 SENP3-EIF4A1A0A087X0R7 540 aa19.5■□□□□ 0.71
CGRRF1-204ENST00000556216 GIGYF1O75420 1035 aaPredicted RBP19.5■□□□□ 0.71
CGRRF1-204ENST00000556216 DPEP1P16444 411 aa19.49■□□□□ 0.71
CGRRF1-204ENST00000556216 TBC1D9BQ66K14 1250 aa19.49■□□□□ 0.71
CGRRF1-204ENST00000556216 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
CGRRF1-204ENST00000556216 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
CGRRF1-204ENST00000556216 SCN7AQ01118 1682 aa19.48■□□□□ 0.71
CGRRF1-204ENST00000556216 A0A087WZG4 1122 aa19.48■□□□□ 0.71
CGRRF1-204ENST00000556216 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
CGRRF1-204ENST00000556216 KCNA3P22001 575 aa19.48■□□□□ 0.71
CGRRF1-204ENST00000556216 LAMB4A4D0S4 1761 aa19.47■□□□□ 0.71
CGRRF1-204ENST00000556216 TGFB2P61812 414 aa19.47■□□□□ 0.71
CGRRF1-204ENST00000556216 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
CGRRF1-204ENST00000556216 SERPINB2P05120 415 aa19.46■□□□□ 0.71
CGRRF1-204ENST00000556216 CHRNA5P30532 468 aa19.46■□□□□ 0.71
CGRRF1-204ENST00000556216 CCDC24Q8N4L8 307 aa19.46■□□□□ 0.71
CGRRF1-204ENST00000556216 APAF1O14727 1248 aa19.46■□□□□ 0.71
CGRRF1-204ENST00000556216 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
CGRRF1-204ENST00000556216 BRCA1P38398 1863 aaKnown RBP19.45■□□□□ 0.7
CGRRF1-204ENST00000556216 NRXN2Q9P2S2 1712 aa19.45■□□□□ 0.7
CGRRF1-204ENST00000556216 CARMIL3Q8ND23 1372 aa19.45■□□□□ 0.7
CGRRF1-204ENST00000556216 BCORQ6W2J9 1755 aa19.45■□□□□ 0.7
CGRRF1-204ENST00000556216 GRIN3BO60391 1043 aa19.44■□□□□ 0.7
CGRRF1-204ENST00000556216 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
CGRRF1-204ENST00000556216 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
CGRRF1-204ENST00000556216 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
CGRRF1-204ENST00000556216 LAS1LQ9Y4W2 734 aaKnown RBP19.44■□□□□ 0.7
CGRRF1-204ENST00000556216 BCS1LQ9Y276 419 aa19.44■□□□□ 0.7
CGRRF1-204ENST00000556216 ANP32CO43423 234 aa19.42■□□□□ 0.7
CGRRF1-204ENST00000556216 MYL6BP14649 208 aa19.42■□□□□ 0.7
CGRRF1-204ENST00000556216 ZNF784Q8NCA9 323 aaPredicted RBP19.42■□□□□ 0.7
CGRRF1-204ENST00000556216 HLFQ16534 295 aa19.41■□□□□ 0.7
CGRRF1-204ENST00000556216 CHL1O00533 1208 aa19.41■□□□□ 0.7
CGRRF1-204ENST00000556216 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
CGRRF1-204ENST00000556216 NECTIN2Q92692 538 aa19.41■□□□□ 0.7
CGRRF1-204ENST00000556216 ANXA1P04083 346 aa19.4■□□□□ 0.7
CGRRF1-204ENST00000556216 PROSER3Q2NL68 480 aa19.39■□□□□ 0.7
CGRRF1-204ENST00000556216 PRR5LQ6MZQ0 368 aa19.39■□□□□ 0.7
CGRRF1-204ENST00000556216 TTLL7Q6ZT98 887 aa19.39■□□□□ 0.7
CGRRF1-204ENST00000556216 MRS2Q9HD23 443 aa19.39■□□□□ 0.7
CGRRF1-204ENST00000556216 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.69
CGRRF1-204ENST00000556216 SETDB2Q96T68 719 aa19.39■□□□□ 0.69
CGRRF1-204ENST00000556216 PDIA6Q15084 440 aa19.38■□□□□ 0.69
CGRRF1-204ENST00000556216 BABAM1Q9NWV8 329 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms