RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 NBPF15Q8N660 670 aa14.85□□□□□ -0.03
GABRB3-210ENST00000556166 NECTIN2Q92692 538 aa14.85□□□□□ -0.03
GABRB3-210ENST00000556166 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
GABRB3-210ENST00000556166 TEX13AQ9BXU3 409 aaPredicted RBP14.85□□□□□ -0.03
GABRB3-210ENST00000556166 STARD3NLO95772 234 aa14.84□□□□□ -0.03
GABRB3-210ENST00000556166 TWISTNBQ3B726 338 aaPredicted RBP14.84□□□□□ -0.03
GABRB3-210ENST00000556166 HOXB7P09629 217 aa14.83□□□□□ -0.04
GABRB3-210ENST00000556166 PDIA6Q15084 440 aa14.83□□□□□ -0.04
GABRB3-210ENST00000556166 RC3H1Q5TC82 1133 aaKnown RBP14.83□□□□□ -0.04
GABRB3-210ENST00000556166 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
GABRB3-210ENST00000556166 PROSER3Q2NL68 480 aa14.82□□□□□ -0.04
GABRB3-210ENST00000556166 CCDC87Q9NVE4 849 aa14.82□□□□□ -0.04
GABRB3-210ENST00000556166 ZBTB1Q9Y2K1 713 aa14.82□□□□□ -0.04
GABRB3-210ENST00000556166 TJP1Q07157 1748 aa14.82□□□□□ -0.04
GABRB3-210ENST00000556166 CNTNAP4Q9C0A0 1308 aa14.82□□□□□ -0.04
GABRB3-210ENST00000556166 HDGFL1Q5TGJ6 251 aa14.81□□□□□ -0.04
GABRB3-210ENST00000556166 LRP10Q7Z4F1 713 aa14.81□□□□□ -0.04
GABRB3-210ENST00000556166 RGPD3A6NKT7 1758 aaPredicted RBP14.81□□□□□ -0.04
GABRB3-210ENST00000556166 RGPD4Q7Z3J3 1758 aa14.81□□□□□ -0.04
GABRB3-210ENST00000556166 ZNF831Q5JPB2 1677 aa14.81□□□□□ -0.04
GABRB3-210ENST00000556166 ANXA1P04083 346 aa14.81□□□□□ -0.04
GABRB3-210ENST00000556166 CANXP27824 592 aaKnown RBP14.81□□□□□ -0.04
GABRB3-210ENST00000556166 SOS1Q07889 1333 aaPredicted RBP14.8□□□□□ -0.04
GABRB3-210ENST00000556166 RPS6KA4O75676 772 aa14.8□□□□□ -0.04
GABRB3-210ENST00000556166 SLC15A2Q16348 729 aa14.8□□□□□ -0.04
GABRB3-210ENST00000556166 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
GABRB3-210ENST00000556166 C5P01031 1676 aa14.8□□□□□ -0.04
GABRB3-210ENST00000556166 GNPATO15228 680 aa14.79□□□□□ -0.04
GABRB3-210ENST00000556166 EIF5P55010 431 aaKnown RBP14.79□□□□□ -0.04
GABRB3-210ENST00000556166 AK7Q96M32 723 aa14.79□□□□□ -0.04
GABRB3-210ENST00000556166 CICQ96RK0 1608 aaPredicted RBP14.79□□□□□ -0.04
GABRB3-210ENST00000556166 RREB1Q92766 1687 aa14.78□□□□□ -0.04
GABRB3-210ENST00000556166 TFCP2L1Q9NZI6 479 aa14.78□□□□□ -0.04
GABRB3-210ENST00000556166 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
GABRB3-210ENST00000556166 MYL6BP14649 208 aa14.77□□□□□ -0.04
GABRB3-210ENST00000556166 CCDC30Q5VVM6 783 aa14.77□□□□□ -0.04
GABRB3-210ENST00000556166 PDGFDQ9GZP0 370 aaPredicted RBP14.77□□□□□ -0.04
GABRB3-210ENST00000556166 DDX21Q9NR30 783 aaKnown RBP eCLIP14.77□□□□□ -0.04
GABRB3-210ENST00000556166 STK32BQ9NY57 414 aa14.77□□□□□ -0.04
GABRB3-210ENST00000556166 C4BP0C0L5 1744 aa14.77□□□□□ -0.04
GABRB3-210ENST00000556166 NUP188Q5SRE5 1749 aa14.77□□□□□ -0.05
GABRB3-210ENST00000556166 G2E3Q7L622 706 aa14.77□□□□□ -0.05
GABRB3-210ENST00000556166 SSH1Q8WYL5 1049 aa14.77□□□□□ -0.05
GABRB3-210ENST00000556166 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.05
GABRB3-210ENST00000556166 DBF4Q9UBU7 674 aaPredicted RBP14.77□□□□□ -0.05
GABRB3-210ENST00000556166 ERBB4Q15303 1308 aa14.76□□□□□ -0.05
GABRB3-210ENST00000556166 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-210ENST00000556166 TAF1LQ8IZX4 1826 aa14.76□□□□□ -0.05
GABRB3-210ENST00000556166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.76□□□□□ -0.05
GABRB3-210ENST00000556166 PHF14O94880 888 aa14.76□□□□□ -0.05
GABRB3-210ENST00000556166 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
GABRB3-210ENST00000556166 IL6STP40189 918 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-210ENST00000556166 RARSP54136 660 aaKnown RBP14.76□□□□□ -0.05
GABRB3-210ENST00000556166 COL23A1Q86Y22 540 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-210ENST00000556166 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
GABRB3-210ENST00000556166 PNPLA7Q6ZV29 1317 aa14.75□□□□□ -0.05
GABRB3-210ENST00000556166 CT47B1P0C2W7 299 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-210ENST00000556166 HMGB2P26583 209 aaKnown RBP14.75□□□□□ -0.05
GABRB3-210ENST00000556166 R3HDM1Q15032 1099 aaKnown RBP14.75□□□□□ -0.05
GABRB3-210ENST00000556166 TTLL7Q6ZT98 887 aa14.75□□□□□ -0.05
GABRB3-210ENST00000556166 BCL2L13Q9BXK5 485 aa14.75□□□□□ -0.05
GABRB3-210ENST00000556166 PHAXQ9H814 394 aaKnown RBP14.75□□□□□ -0.05
GABRB3-210ENST00000556166 TRAPPC3LQ5T215 181 aa14.74□□□□□ -0.05
GABRB3-210ENST00000556166 COPS6Q7L5N1 327 aa14.74□□□□□ -0.05
GABRB3-210ENST00000556166 MRPL50Q8N5N7 158 aaKnown RBP14.74□□□□□ -0.05
GABRB3-210ENST00000556166 XAGE3Q8WTP9 111 aa14.74□□□□□ -0.05
GABRB3-210ENST00000556166 TBC1D2BQ9UPU7 963 aa14.74□□□□□ -0.05
GABRB3-210ENST00000556166 ZNF330Q9Y3S2 320 aaPredicted RBP14.74□□□□□ -0.05
GABRB3-210ENST00000556166 PSDA5PKW4 1024 aaPredicted RBP14.73□□□□□ -0.05
GABRB3-210ENST00000556166 BCAR3O75815 825 aa14.73□□□□□ -0.05
GABRB3-210ENST00000556166 SSFA2P28290 1259 aa14.73□□□□□ -0.05
GABRB3-210ENST00000556166 HYPKQ9NX55 129 aa14.73□□□□□ -0.05
GABRB3-210ENST00000556166 SRP68Q9UHB9 627 aaKnown RBP14.73□□□□□ -0.05
GABRB3-210ENST00000556166 AIMP1Q12904 312 aaKnown RBP14.73□□□□□ -0.05
GABRB3-210ENST00000556166 ZNF428Q96B54 188 aa14.73□□□□□ -0.05
GABRB3-210ENST00000556166 STK31Q9BXU1 1019 aa14.73□□□□□ -0.05
GABRB3-210ENST00000556166 CHMP4AQ9BY43 222 aa14.73□□□□□ -0.05
GABRB3-210ENST00000556166 COL15A1P39059 1388 aa14.72□□□□□ -0.05
GABRB3-210ENST00000556166 ADRA2BP18089 450 aa14.72□□□□□ -0.05
GABRB3-210ENST00000556166 ALDH1L2Q3SY69 923 aa14.72□□□□□ -0.05
GABRB3-210ENST00000556166 LAMB4A4D0S4 1761 aa14.71□□□□□ -0.05
GABRB3-210ENST00000556166 CAMTA2O94983 1202 aa14.71□□□□□ -0.05
GABRB3-210ENST00000556166 DZIP3Q86Y13 1208 aaKnown RBP14.71□□□□□ -0.05
GABRB3-210ENST00000556166 BCL2L12Q9HB09 334 aa14.71□□□□□ -0.05
GABRB3-210ENST00000556166 CENPBP07199 599 aaPredicted RBP14.7□□□□□ -0.06
GABRB3-210ENST00000556166 RFC4P35249 363 aa14.7□□□□□ -0.06
GABRB3-210ENST00000556166 FLAD1Q8NFF5 587 aa14.7□□□□□ -0.06
GABRB3-210ENST00000556166 ARXQ96QS3 562 aa14.7□□□□□ -0.06
GABRB3-210ENST00000556166 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
GABRB3-210ENST00000556166 NARFQ9UHQ1 456 aa14.7□□□□□ -0.06
GABRB3-210ENST00000556166 A0A087WZG4 1122 aa14.69□□□□□ -0.06
GABRB3-210ENST00000556166 MSH5O43196 834 aa14.69□□□□□ -0.06
GABRB3-210ENST00000556166 BRPF1P55201 1214 aaPredicted RBP14.69□□□□□ -0.06
GABRB3-210ENST00000556166 FLIIQ13045 1269 aa14.69□□□□□ -0.06
GABRB3-210ENST00000556166 HLFQ16534 295 aa14.69□□□□□ -0.06
GABRB3-210ENST00000556166 USPL1Q5W0Q7 1092 aa14.69□□□□□ -0.06
GABRB3-210ENST00000556166 RCAN3Q9UKA8 241 aa14.69□□□□□ -0.06
GABRB3-210ENST00000556166 UBR3Q6ZT12 1888 aa14.69□□□□□ -0.06
GABRB3-210ENST00000556166 USP42Q9H9J4 1324 aaKnown RBP14.69□□□□□ -0.06
GABRB3-210ENST00000556166 GYS1P13807 737 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms