RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 KCNQ3O43525 872 aa20.64■□□□□ 0.89
SDR39U1-215ENST00000555830 ZPR1O75312 459 aa20.64■□□□□ 0.89
SDR39U1-215ENST00000555830 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-215ENST00000555830 INTS5Q6P9B9 1019 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-215ENST00000555830 RUNDC1Q96C34 613 aa20.64■□□□□ 0.89
SDR39U1-215ENST00000555830 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-215ENST00000555830 RRP7AQ9Y3A4 280 aaKnown RBP20.64■□□□□ 0.89
SDR39U1-215ENST00000555830 COL15A1P39059 1388 aa20.63■□□□□ 0.89
SDR39U1-215ENST00000555830 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
SDR39U1-215ENST00000555830 PNISRQ8TF01 805 aaKnown RBP20.63■□□□□ 0.89
SDR39U1-215ENST00000555830 ZBTB1Q9Y2K1 713 aa20.63■□□□□ 0.89
SDR39U1-215ENST00000555830 MMP10P09238 476 aa20.62■□□□□ 0.89
SDR39U1-215ENST00000555830 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
SDR39U1-215ENST00000555830 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
SDR39U1-215ENST00000555830 SOS1Q07889 1333 aaPredicted RBP20.61■□□□□ 0.89
SDR39U1-215ENST00000555830 TMPOP42166 694 aaKnown RBP20.61■□□□□ 0.89
SDR39U1-215ENST00000555830 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
SDR39U1-215ENST00000555830 SRP68Q9UHB9 627 aaKnown RBP20.61■□□□□ 0.89
SDR39U1-215ENST00000555830 USP42Q9H9J4 1324 aaKnown RBP20.6■□□□□ 0.89
SDR39U1-215ENST00000555830 LAMB4A4D0S4 1761 aa20.59■□□□□ 0.89
SDR39U1-215ENST00000555830 SNRPA1P09661 255 aaKnown RBP20.59■□□□□ 0.89
SDR39U1-215ENST00000555830 GYS1P13807 737 aa20.59■□□□□ 0.89
SDR39U1-215ENST00000555830 PARP3Q9Y6F1 533 aa20.59■□□□□ 0.89
SDR39U1-215ENST00000555830 GPR162Q16538 588 aa20.58■□□□□ 0.89
SDR39U1-215ENST00000555830 NLGN2Q8NFZ4 835 aa20.58■□□□□ 0.89
SDR39U1-215ENST00000555830 A0A087WZG4 1122 aa20.57■□□□□ 0.88
SDR39U1-215ENST00000555830 USPL1Q5W0Q7 1092 aa20.57■□□□□ 0.88
SDR39U1-215ENST00000555830 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
SDR39U1-215ENST00000555830 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
SDR39U1-215ENST00000555830 CD2APQ9Y5K6 639 aa20.56■□□□□ 0.88
SDR39U1-215ENST00000555830 A1BGP04217 495 aa20.55■□□□□ 0.88
SDR39U1-215ENST00000555830 FKBP8Q14318 412 aa20.55■□□□□ 0.88
SDR39U1-215ENST00000555830 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
SDR39U1-215ENST00000555830 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
SDR39U1-215ENST00000555830 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
SDR39U1-215ENST00000555830 USP16Q9Y5T5 823 aa20.54■□□□□ 0.88
SDR39U1-215ENST00000555830 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
SDR39U1-215ENST00000555830 IL6STP40189 918 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-215ENST00000555830 PIP4K2AP48426 406 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-215ENST00000555830 EIF5P55010 431 aaKnown RBP20.51■□□□□ 0.87
SDR39U1-215ENST00000555830 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
SDR39U1-215ENST00000555830 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
SDR39U1-215ENST00000555830 WWC3Q9ULE0 1092 aa20.51■□□□□ 0.87
SDR39U1-215ENST00000555830 TBC1D2BQ9UPU7 963 aa20.51■□□□□ 0.87
SDR39U1-215ENST00000555830 APAF1O14727 1248 aa20.5■□□□□ 0.87
SDR39U1-215ENST00000555830 EIF4A1P60842 406 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-215ENST00000555830 DZIP3Q86Y13 1208 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-215ENST00000555830 BCORQ6W2J9 1755 aa20.49■□□□□ 0.87
SDR39U1-215ENST00000555830 N4BP2Q86UW6 1770 aaPredicted RBP20.49■□□□□ 0.87
SDR39U1-215ENST00000555830 KIF13BQ9NQT8 1826 aa20.49■□□□□ 0.87
SDR39U1-215ENST00000555830 NPHP1O15259 732 aa20.49■□□□□ 0.87
SDR39U1-215ENST00000555830 C10orf71Q711Q0 1435 aa20.49■□□□□ 0.87
SDR39U1-215ENST00000555830 DDR1Q08345 913 aa20.48■□□□□ 0.87
SDR39U1-215ENST00000555830 CHD4Q14839 1912 aa20.48■□□□□ 0.87
SDR39U1-215ENST00000555830 AFDNP55196 1824 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-215ENST00000555830 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
SDR39U1-215ENST00000555830 YY1P25490 414 aa20.47■□□□□ 0.87
SDR39U1-215ENST00000555830 CALD1Q05682 793 aaKnown RBP20.47■□□□□ 0.87
SDR39U1-215ENST00000555830 NGEFQ8N5V2 710 aa20.47■□□□□ 0.87
SDR39U1-215ENST00000555830 BABAM1Q9NWV8 329 aa20.47■□□□□ 0.87
SDR39U1-215ENST00000555830 TRIM35Q9UPQ4 493 aa20.47■□□□□ 0.87
SDR39U1-215ENST00000555830 NFIXQ14938 502 aa20.46■□□□□ 0.87
SDR39U1-215ENST00000555830 ZNF652Q9Y2D9 606 aa20.46■□□□□ 0.87
SDR39U1-215ENST00000555830 POLRMTO00411 1230 aaKnown RBP20.45■□□□□ 0.86
SDR39U1-215ENST00000555830 MYL6BP14649 208 aa20.45■□□□□ 0.86
SDR39U1-215ENST00000555830 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
SDR39U1-215ENST00000555830 SENP3-EIF4A1A0A087X0R7 540 aa20.44■□□□□ 0.86
SDR39U1-215ENST00000555830 GRIN3BO60391 1043 aa20.44■□□□□ 0.86
SDR39U1-215ENST00000555830 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
SDR39U1-215ENST00000555830 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
SDR39U1-215ENST00000555830 SERPINB2P05120 415 aa20.43■□□□□ 0.86
SDR39U1-215ENST00000555830 TM4SF1P30408 202 aa20.43■□□□□ 0.86
SDR39U1-215ENST00000555830 TGFB2P61812 414 aa20.43■□□□□ 0.86
SDR39U1-215ENST00000555830 TBC1D9BQ66K14 1250 aa20.43■□□□□ 0.86
SDR39U1-215ENST00000555830 KIF6Q6ZMV9 814 aa20.43■□□□□ 0.86
SDR39U1-215ENST00000555830 A0A0G2JLW4 131 aa20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 NBPF26B4DH59 902 aa20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 CAMTA2O94983 1202 aa20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 YBX3P16989 372 aaKnown RBP eCLIP20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 NBPF10Q6P3W6 841 aaKnown RBP20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 NBPF15Q8N660 670 aa20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 NECTIN2Q92692 538 aa20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 SETDB2Q96T68 719 aa20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
SDR39U1-215ENST00000555830 KIAA1551Q9HCM1 1747 aa20.41■□□□□ 0.86
SDR39U1-215ENST00000555830 FAM9BQ8IZU0 186 aa20.41■□□□□ 0.86
SDR39U1-215ENST00000555830 CHL1O00533 1208 aa20.4■□□□□ 0.86
SDR39U1-215ENST00000555830 DPEP1P16444 411 aa20.4■□□□□ 0.86
SDR39U1-215ENST00000555830 BCS1LQ9Y276 419 aa20.4■□□□□ 0.86
SDR39U1-215ENST00000555830 NRXN2Q9P2S2 1712 aa20.39■□□□□ 0.86
SDR39U1-215ENST00000555830 ERBB4Q15303 1308 aa20.39■□□□□ 0.85
SDR39U1-215ENST00000555830 GNAI1P63096 354 aa20.39■□□□□ 0.85
SDR39U1-215ENST00000555830 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
SDR39U1-215ENST00000555830 CNBD1Q8NA66 436 aa20.38■□□□□ 0.85
SDR39U1-215ENST00000555830 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
SDR39U1-215ENST00000555830 NUP98P52948 1817 aa20.37■□□□□ 0.85
SDR39U1-215ENST00000555830 ST5P78524 1137 aa20.37■□□□□ 0.85
SDR39U1-215ENST00000555830 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
SDR39U1-215ENST00000555830 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
SDR39U1-215ENST00000555830 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms