RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 CYP19A1P11511 503 aaPredicted RBP15.62■□□□□ 0.09
ACTN1-214ENST00000555075 WDR63Q8IWG1 891 aa15.62■□□□□ 0.09
ACTN1-214ENST00000555075 CHMP4AQ9BY43 222 aa15.62■□□□□ 0.09
ACTN1-214ENST00000555075 MYH16Q9H6N6 1097 aa15.62■□□□□ 0.09
ACTN1-214ENST00000555075 KCPQ6ZWJ8 1503 aa15.62■□□□□ 0.09
ACTN1-214ENST00000555075 C4BP0C0L5 1744 aa15.61■□□□□ 0.09
ACTN1-214ENST00000555075 A0A087WZG4 1122 aa15.61■□□□□ 0.09
ACTN1-214ENST00000555075 ADRA2BP18089 450 aa15.61■□□□□ 0.09
ACTN1-214ENST00000555075 EIF2S2P20042 333 aaKnown RBP15.61■□□□□ 0.09
ACTN1-214ENST00000555075 MTFR1LQ9H019 292 aa15.61■□□□□ 0.09
ACTN1-214ENST00000555075 SIPA1L3O60292 1781 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-214ENST00000555075 ZPR1O75312 459 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 POLD1P28340 1107 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 PTGER2P43116 358 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 HNRNPUQ00839 825 aaKnown RBP eCLIP15.6■□□□□ 0.09
ACTN1-214ENST00000555075 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 MBIPQ9NS73 344 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 IL16Q14005 1332 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 PNPLA7Q6ZV29 1317 aa15.6■□□□□ 0.09
ACTN1-214ENST00000555075 GIGYF1O75420 1035 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-214ENST00000555075 GOLGA2Q08379 1002 aa15.59■□□□□ 0.09
ACTN1-214ENST00000555075 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-214ENST00000555075 QSER1Q2KHR3 1735 aa15.58■□□□□ 0.08
ACTN1-214ENST00000555075 A1BGP04217 495 aa15.58■□□□□ 0.08
ACTN1-214ENST00000555075 INTS5Q6P9B9 1019 aaKnown RBP15.58■□□□□ 0.08
ACTN1-214ENST00000555075 NECTIN2Q92692 538 aa15.58■□□□□ 0.08
ACTN1-214ENST00000555075 ZBTB1Q9Y2K1 713 aa15.58■□□□□ 0.08
ACTN1-214ENST00000555075 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
ACTN1-214ENST00000555075 PRAMEF22A3QJZ6 481 aa15.57■□□□□ 0.08
ACTN1-214ENST00000555075 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
ACTN1-214ENST00000555075 ELL2O00472 640 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-214ENST00000555075 HDGFL1Q5TGJ6 251 aa15.57■□□□□ 0.08
ACTN1-214ENST00000555075 TSR2Q969E8 191 aaKnown RBP15.57■□□□□ 0.08
ACTN1-214ENST00000555075 TUBGCP6Q96RT7 1819 aa15.57■□□□□ 0.08
ACTN1-214ENST00000555075 ZNF853P0CG23 659 aa15.56■□□□□ 0.08
ACTN1-214ENST00000555075 MYL6BP14649 208 aa15.56■□□□□ 0.08
ACTN1-214ENST00000555075 IL6STP40189 918 aaPredicted RBP15.56■□□□□ 0.08
ACTN1-214ENST00000555075 DUSP27Q5VZP5 1158 aa15.56■□□□□ 0.08
ACTN1-214ENST00000555075 MSL1Q68DK7 614 aa15.56■□□□□ 0.08
ACTN1-214ENST00000555075 SMIM5Q71RC9 77 aa15.56■□□□□ 0.08
ACTN1-214ENST00000555075 ARHGEF1Q92888 912 aaKnown RBP15.56■□□□□ 0.08
ACTN1-214ENST00000555075 UBR2Q8IWV8 1755 aa15.56■□□□□ 0.08
ACTN1-214ENST00000555075 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
ACTN1-214ENST00000555075 TJP1Q07157 1748 aa15.55■□□□□ 0.08
ACTN1-214ENST00000555075 COL15A1P39059 1388 aa15.55■□□□□ 0.08
ACTN1-214ENST00000555075 SOS1Q07889 1333 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-214ENST00000555075 HOXB7P09629 217 aa15.55■□□□□ 0.08
ACTN1-214ENST00000555075 PIP4K2AP48426 406 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-214ENST00000555075 KIF6Q6ZMV9 814 aa15.55■□□□□ 0.08
ACTN1-214ENST00000555075 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
ACTN1-214ENST00000555075 FHDC1Q9C0D6 1143 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-214ENST00000555075 KDM3BQ7LBC6 1761 aa15.54■□□□□ 0.08
ACTN1-214ENST00000555075 ERBB4Q15303 1308 aa15.54■□□□□ 0.08
ACTN1-214ENST00000555075 E9PSI1 815 aa15.54■□□□□ 0.08
ACTN1-214ENST00000555075 KLHL34Q8N239 644 aa15.54■□□□□ 0.08
ACTN1-214ENST00000555075 NLGN1Q8N2Q7 840 aa15.54■□□□□ 0.08
ACTN1-214ENST00000555075 STK31Q9BXU1 1019 aa15.54■□□□□ 0.08
ACTN1-214ENST00000555075 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
ACTN1-214ENST00000555075 NPHP1O15259 732 aa15.53■□□□□ 0.08
ACTN1-214ENST00000555075 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
ACTN1-214ENST00000555075 DZIP3Q86Y13 1208 aaKnown RBP15.53■□□□□ 0.08
ACTN1-214ENST00000555075 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
ACTN1-214ENST00000555075 COL5A3P25940 1745 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-214ENST00000555075 TWISTNBQ3B726 338 aaPredicted RBP15.52■□□□□ 0.08
ACTN1-214ENST00000555075 CCDC30Q5VVM6 783 aa15.52■□□□□ 0.08
ACTN1-214ENST00000555075 USPL1Q5W0Q7 1092 aa15.52■□□□□ 0.08
ACTN1-214ENST00000555075 SRP68Q9UHB9 627 aaKnown RBP15.52■□□□□ 0.08
ACTN1-214ENST00000555075 TBC1D2BQ9UPU7 963 aa15.52■□□□□ 0.08
ACTN1-214ENST00000555075 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-214ENST00000555075 EIF5P55010 431 aaKnown RBP15.51■□□□□ 0.07
ACTN1-214ENST00000555075 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
ACTN1-214ENST00000555075 SYT17Q9BSW7 474 aa15.51■□□□□ 0.07
ACTN1-214ENST00000555075 DBF4Q9UBU7 674 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-214ENST00000555075 NARFQ9UHQ1 456 aa15.51■□□□□ 0.07
ACTN1-214ENST00000555075 PARP3Q9Y6F1 533 aa15.51■□□□□ 0.07
ACTN1-214ENST00000555075 USP42Q9H9J4 1324 aaKnown RBP15.5■□□□□ 0.07
ACTN1-214ENST00000555075 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
ACTN1-214ENST00000555075 AMIGO3Q86WK7 504 aa15.5■□□□□ 0.07
ACTN1-214ENST00000555075 C8orf58Q8NAV2 365 aa15.5■□□□□ 0.07
ACTN1-214ENST00000555075 YY1P25490 414 aa15.49■□□□□ 0.07
ACTN1-214ENST00000555075 BICDL1Q6ZP65 573 aa15.49■□□□□ 0.07
ACTN1-214ENST00000555075 DDX21Q9NR30 783 aaKnown RBP eCLIP15.49■□□□□ 0.07
ACTN1-214ENST00000555075 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
ACTN1-214ENST00000555075 CHPF2Q9P2E5 772 aa15.49■□□□□ 0.07
ACTN1-214ENST00000555075 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
ACTN1-214ENST00000555075 NBPF26B4DH59 902 aa15.48■□□□□ 0.07
ACTN1-214ENST00000555075 GYS1P13807 737 aa15.48■□□□□ 0.07
ACTN1-214ENST00000555075 NBPF10Q6P3W6 841 aaKnown RBP15.48■□□□□ 0.07
ACTN1-214ENST00000555075 NBPF15Q8N660 670 aa15.48■□□□□ 0.07
ACTN1-214ENST00000555075 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
ACTN1-214ENST00000555075 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
ACTN1-214ENST00000555075 ANXA1P04083 346 aa15.47■□□□□ 0.07
ACTN1-214ENST00000555075 MMP10P09238 476 aa15.47■□□□□ 0.07
ACTN1-214ENST00000555075 SLFN5Q08AF3 891 aa15.47■□□□□ 0.07
ACTN1-214ENST00000555075 ZNF521Q96K83 1311 aa15.46■□□□□ 0.07
ACTN1-214ENST00000555075 TCERG1O14776 1098 aaKnown RBP15.46■□□□□ 0.07
ACTN1-214ENST00000555075 DDX58O95786 925 aaKnown RBP15.46■□□□□ 0.07
ACTN1-214ENST00000555075 FKBP8Q14318 412 aa15.46■□□□□ 0.07
ACTN1-214ENST00000555075 TSPYL6Q8N831 410 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms