RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 JARID2Q92833 1246 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-211ENST00000555055 SOS1Q07889 1333 aaPredicted RBP18.22■□□□□ 0.51
XRCC3-211ENST00000555055 NPHP3Q7Z494 1330 aa18.22■□□□□ 0.51
XRCC3-211ENST00000555055 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
XRCC3-211ENST00000555055 ARXQ96QS3 562 aa18.22■□□□□ 0.51
XRCC3-211ENST00000555055 KDM3BQ7LBC6 1761 aa18.22■□□□□ 0.51
XRCC3-211ENST00000555055 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
XRCC3-211ENST00000555055 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
XRCC3-211ENST00000555055 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
XRCC3-211ENST00000555055 LMO7Q8WWI1 1683 aa18.22■□□□□ 0.51
XRCC3-211ENST00000555055 CYP27B1O15528 508 aa18.21■□□□□ 0.51
XRCC3-211ENST00000555055 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
XRCC3-211ENST00000555055 MX1P20591 662 aa18.21■□□□□ 0.51
XRCC3-211ENST00000555055 PHRF1Q9P1Y6 1649 aaKnown RBP18.21■□□□□ 0.51
XRCC3-211ENST00000555055 ALS2Q96Q42 1657 aa18.21■□□□□ 0.51
XRCC3-211ENST00000555055 PHKG2P15735 406 aa18.21■□□□□ 0.51
XRCC3-211ENST00000555055 PA2G4Q9UQ80 394 aaKnown RBP18.21■□□□□ 0.51
XRCC3-211ENST00000555055 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
XRCC3-211ENST00000555055 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
XRCC3-211ENST00000555055 GLIPR1L2Q4G1C9 344 aa18.2■□□□□ 0.5
XRCC3-211ENST00000555055 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
XRCC3-211ENST00000555055 USP26Q9BXU7 913 aa18.2■□□□□ 0.5
XRCC3-211ENST00000555055 HSP90AA1P07900 732 aaKnown RBP18.2■□□□□ 0.5
XRCC3-211ENST00000555055 ZNF496Q96IT1 587 aaPredicted RBP18.2■□□□□ 0.5
XRCC3-211ENST00000555055 PKNOX2Q96KN3 472 aa18.19■□□□□ 0.5
XRCC3-211ENST00000555055 SLC52A2Q9HAB3 445 aa18.19■□□□□ 0.5
XRCC3-211ENST00000555055 C9orf78Q9NZ63 289 aaPredicted RBP18.19■□□□□ 0.5
XRCC3-211ENST00000555055 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
XRCC3-211ENST00000555055 SPATA31A3Q5VYP0 1347 aa18.19■□□□□ 0.5
XRCC3-211ENST00000555055 NCAPD2Q15021 1401 aa18.19■□□□□ 0.5
XRCC3-211ENST00000555055 TRAK2O60296 914 aa18.18■□□□□ 0.5
XRCC3-211ENST00000555055 KIF1AQ12756 1690 aa18.18■□□□□ 0.5
XRCC3-211ENST00000555055 IL25Q9H293 177 aa18.18■□□□□ 0.5
XRCC3-211ENST00000555055 SALL3Q9BXA9 1300 aa18.18■□□□□ 0.5
XRCC3-211ENST00000555055 SSH3Q8TE77 659 aa18.18■□□□□ 0.5
XRCC3-211ENST00000555055 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
XRCC3-211ENST00000555055 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
XRCC3-211ENST00000555055 PDIA6Q15084 440 aa18.17■□□□□ 0.5
XRCC3-211ENST00000555055 HOXB7P09629 217 aa18.17■□□□□ 0.5
XRCC3-211ENST00000555055 PTMSP20962 102 aa18.17■□□□□ 0.5
XRCC3-211ENST00000555055 GZF1Q9H116 711 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-211ENST00000555055 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
XRCC3-211ENST00000555055 STRN4Q9NRL3 753 aa18.17■□□□□ 0.5
XRCC3-211ENST00000555055 DDIT3P35638 169 aa18.16■□□□□ 0.5
XRCC3-211ENST00000555055 CIZ1Q9ULV3 898 aaPredicted RBP18.16■□□□□ 0.5
XRCC3-211ENST00000555055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.16■□□□□ 0.5
XRCC3-211ENST00000555055 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
XRCC3-211ENST00000555055 OS9Q13438 667 aaPredicted RBP18.16■□□□□ 0.5
XRCC3-211ENST00000555055 KLHDC4Q8TBB5 520 aa18.16■□□□□ 0.5
XRCC3-211ENST00000555055 RHPN1Q8TCX5 695 aa18.16■□□□□ 0.5
XRCC3-211ENST00000555055 SNX21Q969T3 373 aa18.16■□□□□ 0.5
XRCC3-211ENST00000555055 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
XRCC3-211ENST00000555055 SPG7Q9UQ90 795 aa18.15■□□□□ 0.5
XRCC3-211ENST00000555055 RRP9O43818 475 aaKnown RBP18.15■□□□□ 0.5
XRCC3-211ENST00000555055 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
XRCC3-211ENST00000555055 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
XRCC3-211ENST00000555055 CASC1Q6TDU7 716 aa18.14■□□□□ 0.49
XRCC3-211ENST00000555055 NOL8Q76FK4 1167 aaKnown RBP18.14■□□□□ 0.49
XRCC3-211ENST00000555055 COPS6Q7L5N1 327 aa18.14■□□□□ 0.49
XRCC3-211ENST00000555055 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
XRCC3-211ENST00000555055 OSBPL3Q9H4L5 887 aa18.14■□□□□ 0.49
XRCC3-211ENST00000555055 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
XRCC3-211ENST00000555055 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
XRCC3-211ENST00000555055 SIL1Q9H173 461 aa18.14■□□□□ 0.49
XRCC3-211ENST00000555055 HEG1Q9ULI3 1381 aa18.14■□□□□ 0.49
XRCC3-211ENST00000555055 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
XRCC3-211ENST00000555055 POLA2Q14181 598 aa18.13■□□□□ 0.49
XRCC3-211ENST00000555055 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
XRCC3-211ENST00000555055 SLAIN2Q9P270 581 aa18.13■□□□□ 0.49
XRCC3-211ENST00000555055 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
XRCC3-211ENST00000555055 ANO2Q9NQ90 1003 aa18.13■□□□□ 0.49
XRCC3-211ENST00000555055 PALD1Q9ULE6 856 aa18.13■□□□□ 0.49
XRCC3-211ENST00000555055 ERC2O15083 957 aa18.12■□□□□ 0.49
XRCC3-211ENST00000555055 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
XRCC3-211ENST00000555055 GRPEL1Q9HAV7 217 aa18.12■□□□□ 0.49
XRCC3-211ENST00000555055 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
XRCC3-211ENST00000555055 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
XRCC3-211ENST00000555055 PANK2Q9BZ23 570 aa18.12■□□□□ 0.49
XRCC3-211ENST00000555055 DDX21Q9NR30 783 aaKnown RBP eCLIP18.12■□□□□ 0.49
XRCC3-211ENST00000555055 MYD88Q99836 296 aa18.11■□□□□ 0.49
XRCC3-211ENST00000555055 BICC1Q9H694 974 aaKnown RBP18.11■□□□□ 0.49
XRCC3-211ENST00000555055 AK9Q5TCS8 1911 aa18.11■□□□□ 0.49
XRCC3-211ENST00000555055 ATP5J2-PTCD1G3V325 749 aa18.11■□□□□ 0.49
XRCC3-211ENST00000555055 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
XRCC3-211ENST00000555055 CABP4P57796 275 aa18.11■□□□□ 0.49
XRCC3-211ENST00000555055 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
XRCC3-211ENST00000555055 CAMTA1Q9Y6Y1 1673 aa18.11■□□□□ 0.49
XRCC3-211ENST00000555055 COL18A1P39060 1754 aa18.1■□□□□ 0.49
XRCC3-211ENST00000555055 CHMLP26374 656 aa18.1■□□□□ 0.49
XRCC3-211ENST00000555055 SKOR2Q2VWA4 1001 aaPredicted RBP18.1■□□□□ 0.49
XRCC3-211ENST00000555055 XIRP1Q702N8 1843 aaKnown RBP18.1■□□□□ 0.49
XRCC3-211ENST00000555055 TNPO1Q92973 898 aaKnown RBP18.1■□□□□ 0.49
XRCC3-211ENST00000555055 NAP1L5Q96NT1 182 aaPredicted RBP18.1■□□□□ 0.49
XRCC3-211ENST00000555055 ESYT1Q9BSJ8 1104 aa18.1■□□□□ 0.49
XRCC3-211ENST00000555055 DCCP43146 1447 aa18.09■□□□□ 0.49
XRCC3-211ENST00000555055 PKP1Q13835 747 aa18.09■□□□□ 0.49
XRCC3-211ENST00000555055 EPHA10Q5JZY3 1008 aa18.09■□□□□ 0.49
XRCC3-211ENST00000555055 C5P01031 1676 aa18.09■□□□□ 0.49
XRCC3-211ENST00000555055 GRM8O00222 908 aa18.08■□□□□ 0.49
XRCC3-211ENST00000555055 REC8O95072 547 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms