RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 CCDC87Q9NVE4 849 aa15.38■□□□□ 0.05
TMEM253-203ENST00000554329 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
TMEM253-203ENST00000554329 HEG1Q9ULI3 1381 aa15.37■□□□□ 0.05
TMEM253-203ENST00000554329 GYS1P13807 737 aa15.37■□□□□ 0.05
TMEM253-203ENST00000554329 NFE2L2Q16236 605 aa15.37■□□□□ 0.05
TMEM253-203ENST00000554329 A1BGP04217 495 aa15.36■□□□□ 0.05
TMEM253-203ENST00000554329 FKBP8Q14318 412 aa15.36■□□□□ 0.05
TMEM253-203ENST00000554329 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
TMEM253-203ENST00000554329 SOS1Q07889 1333 aaPredicted RBP15.36■□□□□ 0.05
TMEM253-203ENST00000554329 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
TMEM253-203ENST00000554329 NEFMP07197 916 aa15.35■□□□□ 0.05
TMEM253-203ENST00000554329 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
TMEM253-203ENST00000554329 USP16Q9Y5T5 823 aa15.35■□□□□ 0.05
TMEM253-203ENST00000554329 COL15A1P39059 1388 aa15.35■□□□□ 0.05
TMEM253-203ENST00000554329 KDM3BQ7LBC6 1761 aa15.34■□□□□ 0.05
TMEM253-203ENST00000554329 WDR43Q15061 677 aaKnown RBP eCLIP15.34■□□□□ 0.05
TMEM253-203ENST00000554329 GPR162Q16538 588 aa15.34■□□□□ 0.05
TMEM253-203ENST00000554329 FMNL2Q96PY5 1086 aa15.34■□□□□ 0.05
TMEM253-203ENST00000554329 USP42Q9H9J4 1324 aaKnown RBP15.34■□□□□ 0.05
TMEM253-203ENST00000554329 YBX3P16989 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
TMEM253-203ENST00000554329 RIPK4P57078 832 aa15.33■□□□□ 0.04
TMEM253-203ENST00000554329 DDR1Q08345 913 aa15.33■□□□□ 0.04
TMEM253-203ENST00000554329 BICDL1Q6ZP65 573 aa15.32■□□□□ 0.04
TMEM253-203ENST00000554329 BCL2L12Q9HB09 334 aa15.32■□□□□ 0.04
TMEM253-203ENST00000554329 KIAA1551Q9HCM1 1747 aa15.31■□□□□ 0.04
TMEM253-203ENST00000554329 TMPOP42166 694 aaKnown RBP15.31■□□□□ 0.04
TMEM253-203ENST00000554329 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
TMEM253-203ENST00000554329 VSIG10Q8N0Z9 540 aa15.31■□□□□ 0.04
TMEM253-203ENST00000554329 TBC1D2BQ9UPU7 963 aa15.31■□□□□ 0.04
TMEM253-203ENST00000554329 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
TMEM253-203ENST00000554329 AFDNP55196 1824 aaKnown RBP15.3■□□□□ 0.04
TMEM253-203ENST00000554329 CCDC24Q8N4L8 307 aa15.3■□□□□ 0.04
TMEM253-203ENST00000554329 ZPR1O75312 459 aa15.29■□□□□ 0.04
TMEM253-203ENST00000554329 STARD3NLO95772 234 aa15.29■□□□□ 0.04
TMEM253-203ENST00000554329 YY1P25490 414 aa15.29■□□□□ 0.04
TMEM253-203ENST00000554329 NGEFQ8N5V2 710 aa15.29■□□□□ 0.04
TMEM253-203ENST00000554329 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
TMEM253-203ENST00000554329 LAMB4A4D0S4 1761 aa15.29■□□□□ 0.04
TMEM253-203ENST00000554329 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
TMEM253-203ENST00000554329 A0A0G2JLW4 131 aa15.28■□□□□ 0.04
TMEM253-203ENST00000554329 HTATSF1O43719 755 aaKnown RBP15.28■□□□□ 0.04
TMEM253-203ENST00000554329 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
TMEM253-203ENST00000554329 NLGN1Q8N2Q7 840 aa15.28■□□□□ 0.04
TMEM253-203ENST00000554329 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
TMEM253-203ENST00000554329 PXDNLA1KZ92 1463 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 NBPF26B4DH59 902 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 HMGB2P26583 209 aaKnown RBP15.27■□□□□ 0.04
TMEM253-203ENST00000554329 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
TMEM253-203ENST00000554329 NFIXQ14938 502 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 NBPF10Q6P3W6 841 aaKnown RBP15.27■□□□□ 0.04
TMEM253-203ENST00000554329 NBPF15Q8N660 670 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 NECTIN2Q92692 538 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 NARFQ9UHQ1 456 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 TSPYL4Q9UJ04 414 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 TRIM35Q9UPQ4 493 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 CD2APQ9Y5K6 639 aa15.27■□□□□ 0.04
TMEM253-203ENST00000554329 C10orf71Q711Q0 1435 aa15.26■□□□□ 0.03
TMEM253-203ENST00000554329 BCORQ6W2J9 1755 aa15.26■□□□□ 0.03
TMEM253-203ENST00000554329 CARMIL3Q8ND23 1372 aa15.26■□□□□ 0.03
TMEM253-203ENST00000554329 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
TMEM253-203ENST00000554329 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
TMEM253-203ENST00000554329 TBC1D9BQ66K14 1250 aa15.26■□□□□ 0.03
TMEM253-203ENST00000554329 PNNQ9H307 717 aaKnown RBP15.26■□□□□ 0.03
TMEM253-203ENST00000554329 APAF1O14727 1248 aa15.25■□□□□ 0.03
TMEM253-203ENST00000554329 ANXA1P04083 346 aa15.25■□□□□ 0.03
TMEM253-203ENST00000554329 DPEP1P16444 411 aa15.25■□□□□ 0.03
TMEM253-203ENST00000554329 CHRNA5P30532 468 aa15.25■□□□□ 0.03
TMEM253-203ENST00000554329 EIF4A1P60842 406 aaKnown RBP15.25■□□□□ 0.03
TMEM253-203ENST00000554329 CHD4Q14839 1912 aa15.24■□□□□ 0.03
TMEM253-203ENST00000554329 MYL6BP14649 208 aa15.24■□□□□ 0.03
TMEM253-203ENST00000554329 TM4SF1P30408 202 aa15.24■□□□□ 0.03
TMEM253-203ENST00000554329 FAM177BA6PVY3 158 aa15.23■□□□□ 0.03
TMEM253-203ENST00000554329 ANP32CO43423 234 aa15.23■□□□□ 0.03
TMEM253-203ENST00000554329 CAMTA2O94983 1202 aa15.23■□□□□ 0.03
TMEM253-203ENST00000554329 EIF2S2P20042 333 aaKnown RBP15.23■□□□□ 0.03
TMEM253-203ENST00000554329 IL6STP40189 918 aaPredicted RBP15.23■□□□□ 0.03
TMEM253-203ENST00000554329 DZIP3Q86Y13 1208 aaKnown RBP15.23■□□□□ 0.03
TMEM253-203ENST00000554329 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
TMEM253-203ENST00000554329 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
TMEM253-203ENST00000554329 GIGYF1O75420 1035 aaPredicted RBP15.22■□□□□ 0.03
TMEM253-203ENST00000554329 ZNF428Q96B54 188 aa15.22■□□□□ 0.03
TMEM253-203ENST00000554329 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
TMEM253-203ENST00000554329 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
TMEM253-203ENST00000554329 BRCA1P38398 1863 aaKnown RBP15.21■□□□□ 0.03
TMEM253-203ENST00000554329 ANKRD31Q8N7Z5 1873 aa15.21■□□□□ 0.03
TMEM253-203ENST00000554329 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
TMEM253-203ENST00000554329 SERPINB2P05120 415 aa15.21■□□□□ 0.03
TMEM253-203ENST00000554329 HLFQ16534 295 aa15.21■□□□□ 0.03
TMEM253-203ENST00000554329 PROSER3Q2NL68 480 aa15.2■□□□□ 0.02
TMEM253-203ENST00000554329 TTLL7Q6ZT98 887 aa15.2■□□□□ 0.02
TMEM253-203ENST00000554329 PNISRQ8TF01 805 aaKnown RBP15.2■□□□□ 0.02
TMEM253-203ENST00000554329 COL11A2P13942 1736 aaPredicted RBP15.2■□□□□ 0.02
TMEM253-203ENST00000554329 CACNA1SQ13698 1873 aa15.19■□□□□ 0.02
TMEM253-203ENST00000554329 A0A087WZG4 1122 aa15.19■□□□□ 0.02
TMEM253-203ENST00000554329 KCNA3P22001 575 aa15.19■□□□□ 0.02
TMEM253-203ENST00000554329 NPM2Q86SE8 214 aaKnown RBP15.19■□□□□ 0.02
TMEM253-203ENST00000554329 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
TMEM253-203ENST00000554329 ZBTB3Q9H5J0 574 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms