RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 UBR2Q8IWV8 1755 aa18.58■□□□□ 0.57
SV2B-204ENST00000553727 A1BGP04217 495 aa18.58■□□□□ 0.56
SV2B-204ENST00000553727 SSFA2P28290 1259 aa18.58■□□□□ 0.56
SV2B-204ENST00000553727 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.56
SV2B-204ENST00000553727 ATF5Q9Y2D1 282 aaPredicted RBP18.58■□□□□ 0.56
SV2B-204ENST00000553727 TJP1Q07157 1748 aa18.57■□□□□ 0.56
SV2B-204ENST00000553727 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
SV2B-204ENST00000553727 ZNF853P0CG23 659 aa18.57■□□□□ 0.56
SV2B-204ENST00000553727 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
SV2B-204ENST00000553727 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
SV2B-204ENST00000553727 ZBTB1Q9Y2K1 713 aa18.57■□□□□ 0.56
SV2B-204ENST00000553727 ARHGEF1Q92888 912 aaKnown RBP18.56■□□□□ 0.56
SV2B-204ENST00000553727 RFC4P35249 363 aa18.55■□□□□ 0.56
SV2B-204ENST00000553727 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
SV2B-204ENST00000553727 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
SV2B-204ENST00000553727 WDR63Q8IWG1 891 aa18.55■□□□□ 0.56
SV2B-204ENST00000553727 SLC16A10Q8TF71 515 aa18.55■□□□□ 0.56
SV2B-204ENST00000553727 MTFR1LQ9H019 292 aa18.55■□□□□ 0.56
SV2B-204ENST00000553727 SPON1Q9HCB6 807 aa18.55■□□□□ 0.56
SV2B-204ENST00000553727 ZNF330Q9Y3S2 320 aaPredicted RBP18.55■□□□□ 0.56
SV2B-204ENST00000553727 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
SV2B-204ENST00000553727 COL5A3P25940 1745 aaPredicted RBP18.54■□□□□ 0.56
SV2B-204ENST00000553727 ADRA2BP18089 450 aa18.54■□□□□ 0.56
SV2B-204ENST00000553727 EIF2S2P20042 333 aaKnown RBP18.54■□□□□ 0.56
SV2B-204ENST00000553727 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
SV2B-204ENST00000553727 SOS1Q07889 1333 aaPredicted RBP18.53■□□□□ 0.56
SV2B-204ENST00000553727 MSL1Q68DK7 614 aa18.53■□□□□ 0.56
SV2B-204ENST00000553727 TSR2Q969E8 191 aaKnown RBP18.53■□□□□ 0.56
SV2B-204ENST00000553727 ARXQ96QS3 562 aa18.53■□□□□ 0.56
SV2B-204ENST00000553727 CICQ96RK0 1608 aaPredicted RBP18.52■□□□□ 0.56
SV2B-204ENST00000553727 IL16Q14005 1332 aa18.52■□□□□ 0.56
SV2B-204ENST00000553727 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
SV2B-204ENST00000553727 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
SV2B-204ENST00000553727 CASZ1Q86V15 1759 aa18.51■□□□□ 0.55
SV2B-204ENST00000553727 ELL2O00472 640 aaPredicted RBP18.51■□□□□ 0.55
SV2B-204ENST00000553727 UBR3Q6ZT12 1888 aa18.5■□□□□ 0.55
SV2B-204ENST00000553727 MYH14Q7Z406 1995 aaKnown RBP18.5■□□□□ 0.55
SV2B-204ENST00000553727 IL6STP40189 918 aaPredicted RBP18.5■□□□□ 0.55
SV2B-204ENST00000553727 EIF5P55010 431 aaKnown RBP18.5■□□□□ 0.55
SV2B-204ENST00000553727 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
SV2B-204ENST00000553727 SRP68Q9UHB9 627 aaKnown RBP18.5■□□□□ 0.55
SV2B-204ENST00000553727 NBPF26B4DH59 902 aa18.49■□□□□ 0.55
SV2B-204ENST00000553727 ZPR1O75312 459 aa18.49■□□□□ 0.55
SV2B-204ENST00000553727 NBPF10Q6P3W6 841 aaKnown RBP18.49■□□□□ 0.55
SV2B-204ENST00000553727 NBPF15Q8N660 670 aa18.49■□□□□ 0.55
SV2B-204ENST00000553727 COL15A1P39059 1388 aa18.49■□□□□ 0.55
SV2B-204ENST00000553727 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
SV2B-204ENST00000553727 A0A087WZG4 1122 aa18.48■□□□□ 0.55
SV2B-204ENST00000553727 MYL6BP14649 208 aa18.48■□□□□ 0.55
SV2B-204ENST00000553727 POLD1P28340 1107 aa18.48■□□□□ 0.55
SV2B-204ENST00000553727 C8orf58Q8NAV2 365 aa18.48■□□□□ 0.55
SV2B-204ENST00000553727 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
SV2B-204ENST00000553727 PPP1R1BQ9UD71 204 aaPredicted RBP18.48■□□□□ 0.55
SV2B-204ENST00000553727 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
SV2B-204ENST00000553727 ZNF521Q96K83 1311 aa18.48■□□□□ 0.55
SV2B-204ENST00000553727 PTGER2P43116 358 aa18.47■□□□□ 0.55
SV2B-204ENST00000553727 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
SV2B-204ENST00000553727 USPL1Q5W0Q7 1092 aa18.47■□□□□ 0.55
SV2B-204ENST00000553727 MYH16Q9H6N6 1097 aa18.47■□□□□ 0.55
SV2B-204ENST00000553727 USP42Q9H9J4 1324 aaKnown RBP18.47■□□□□ 0.55
SV2B-204ENST00000553727 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
SV2B-204ENST00000553727 HOXB7P09629 217 aa18.46■□□□□ 0.55
SV2B-204ENST00000553727 GYS1P13807 737 aa18.46■□□□□ 0.55
SV2B-204ENST00000553727 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
SV2B-204ENST00000553727 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
SV2B-204ENST00000553727 TSPYL6Q8N831 410 aa18.46■□□□□ 0.55
SV2B-204ENST00000553727 NARFQ9UHQ1 456 aa18.46■□□□□ 0.55
SV2B-204ENST00000553727 DZIP3Q86Y13 1208 aaKnown RBP18.45■□□□□ 0.54
SV2B-204ENST00000553727 NLGN1Q8N2Q7 840 aa18.45■□□□□ 0.54
SV2B-204ENST00000553727 ANXA1P04083 346 aa18.44■□□□□ 0.54
SV2B-204ENST00000553727 FKBP8Q14318 412 aa18.44■□□□□ 0.54
SV2B-204ENST00000553727 SGIP1Q9BQI5 828 aa18.44■□□□□ 0.54
SV2B-204ENST00000553727 ERBB4Q15303 1308 aa18.44■□□□□ 0.54
SV2B-204ENST00000553727 EXOSC9Q06265 439 aaKnown RBP18.43■□□□□ 0.54
SV2B-204ENST00000553727 PROSER3Q2NL68 480 aa18.43■□□□□ 0.54
SV2B-204ENST00000553727 TWISTNBQ3B726 338 aaPredicted RBP18.43■□□□□ 0.54
SV2B-204ENST00000553727 CHPF2Q9P2E5 772 aa18.43■□□□□ 0.54
SV2B-204ENST00000553727 E9PSI1 815 aa18.42■□□□□ 0.54
SV2B-204ENST00000553727 MMP10P09238 476 aa18.42■□□□□ 0.54
SV2B-204ENST00000553727 PDIA6Q15084 440 aa18.42■□□□□ 0.54
SV2B-204ENST00000553727 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
SV2B-204ENST00000553727 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
SV2B-204ENST00000553727 CAMTA2O94983 1202 aa18.41■□□□□ 0.54
SV2B-204ENST00000553727 KLHL34Q8N239 644 aa18.41■□□□□ 0.54
SV2B-204ENST00000553727 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
SV2B-204ENST00000553727 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
SV2B-204ENST00000553727 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
SV2B-204ENST00000553727 TCERG1O14776 1098 aaKnown RBP18.4■□□□□ 0.54
SV2B-204ENST00000553727 SLFN5Q08AF3 891 aa18.4■□□□□ 0.54
SV2B-204ENST00000553727 AIMP1Q12904 312 aaKnown RBP18.4■□□□□ 0.54
SV2B-204ENST00000553727 CCDC30Q5VVM6 783 aa18.4■□□□□ 0.54
SV2B-204ENST00000553727 KIF6Q6ZMV9 814 aa18.4■□□□□ 0.54
SV2B-204ENST00000553727 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
SV2B-204ENST00000553727 TTLL7Q6ZT98 887 aa18.4■□□□□ 0.54
SV2B-204ENST00000553727 CHMP4AQ9BY43 222 aa18.4■□□□□ 0.54
SV2B-204ENST00000553727 PARP3Q9Y6F1 533 aa18.39■□□□□ 0.53
SV2B-204ENST00000553727 C4AP0C0L4 1744 aa18.39■□□□□ 0.53
SV2B-204ENST00000553727 LRP5O75197 1615 aa18.38■□□□□ 0.53
SV2B-204ENST00000553727 COPS6Q7L5N1 327 aa18.38■□□□□ 0.53
SV2B-204ENST00000553727 XAGE3Q8WTP9 111 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms