RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MEX3CQ5U5Q3 659 aaKnown RBP15.86■□□□□ 0.13
SHMT2-205ENST00000553474 ST18O60284 1047 aa15.85■□□□□ 0.13
SHMT2-205ENST00000553474 STAP2Q9UGK3 403 aa15.85■□□□□ 0.13
SHMT2-205ENST00000553474 RAB11FIP3O75154 756 aa15.85■□□□□ 0.13
SHMT2-205ENST00000553474 UBTFL1P0CB47 393 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-205ENST00000553474 ARHGEF25Q86VW2 580 aa15.85■□□□□ 0.13
SHMT2-205ENST00000553474 OTUD7AQ8TE49 926 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-205ENST00000553474 LTV1Q96GA3 475 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-205ENST00000553474 CWC22Q9HCG8 908 aaKnown RBP15.85■□□□□ 0.13
SHMT2-205ENST00000553474 CPDO75976 1380 aa15.85■□□□□ 0.13
SHMT2-205ENST00000553474 PLEKHG2Q9H7P9 1386 aa15.85■□□□□ 0.13
SHMT2-205ENST00000553474 RGPD2P0DJD1 1756 aa15.85■□□□□ 0.13
SHMT2-205ENST00000553474 SMARCA5O60264 1052 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-205ENST00000553474 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
SHMT2-205ENST00000553474 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
SHMT2-205ENST00000553474 ILDR1Q86SU0 546 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-205ENST00000553474 TNPO1Q92973 898 aaKnown RBP15.84■□□□□ 0.13
SHMT2-205ENST00000553474 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
SHMT2-205ENST00000553474 FSD2A1L4K1 749 aa15.83■□□□□ 0.12
SHMT2-205ENST00000553474 MX1P20591 662 aa15.83■□□□□ 0.12
SHMT2-205ENST00000553474 SSH3Q8TE77 659 aa15.83■□□□□ 0.12
SHMT2-205ENST00000553474 C8orf37Q96NL8 207 aa15.83■□□□□ 0.12
SHMT2-205ENST00000553474 USP44Q9H0E7 712 aa15.83■□□□□ 0.12
SHMT2-205ENST00000553474 HDAC5Q9UQL6 1122 aa15.83■□□□□ 0.12
SHMT2-205ENST00000553474 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 GOLGA6L22H0YM25 854 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 CD2BP2O95400 341 aaKnown RBP15.82■□□□□ 0.12
SHMT2-205ENST00000553474 NUCB2P80303 420 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 TEFQ10587 303 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 ADAMTS7Q9UKP4 1686 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 ABCC6O95255 1503 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 MCM2P49736 904 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 ANAPC15P60006 121 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 NRAPQ86VF7 1730 aa15.82■□□□□ 0.12
SHMT2-205ENST00000553474 HSP90AB4PQ58FF6 505 aa15.81■□□□□ 0.12
SHMT2-205ENST00000553474 IL17RAQ96F46 866 aa15.81■□□□□ 0.12
SHMT2-205ENST00000553474 EXOC6BQ9Y2D4 811 aa15.81■□□□□ 0.12
SHMT2-205ENST00000553474 LRRFIP2Q9Y608 721 aaKnown RBP15.81■□□□□ 0.12
SHMT2-205ENST00000553474 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-205ENST00000553474 PNMA6EA0A0J9YXQ4 647 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 APBB1O00213 710 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 MCCP23508 829 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 POLA2Q14181 598 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
SHMT2-205ENST00000553474 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-205ENST00000553474 USHBP1Q8N6Y0 703 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 NGLY1Q96IV0 654 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-205ENST00000553474 BRPF3Q9ULD4 1205 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
SHMT2-205ENST00000553474 AK9Q5TCS8 1911 aa15.79■□□□□ 0.12
SHMT2-205ENST00000553474 BTBD11A6QL63 1104 aa15.79■□□□□ 0.12
SHMT2-205ENST00000553474 DNAAF4Q8WXU2 420 aa15.79■□□□□ 0.12
SHMT2-205ENST00000553474 STRN4Q9NRL3 753 aa15.79■□□□□ 0.12
SHMT2-205ENST00000553474 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
SHMT2-205ENST00000553474 CSB-PGBD3P0DP91 1061 aa15.78■□□□□ 0.12
SHMT2-205ENST00000553474 MRE11P49959 708 aa15.78■□□□□ 0.12
SHMT2-205ENST00000553474 ESYT1Q9BSJ8 1104 aa15.78■□□□□ 0.12
SHMT2-205ENST00000553474 COL5A2P05997 1499 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-205ENST00000553474 RNMTO43148 476 aaKnown RBP15.77■□□□□ 0.11
SHMT2-205ENST00000553474 ALDH1L1O75891 902 aa15.77■□□□□ 0.11
SHMT2-205ENST00000553474 MTX1Q13505 466 aa15.77■□□□□ 0.11
SHMT2-205ENST00000553474 BEND3Q5T5X7 828 aa15.77■□□□□ 0.11
SHMT2-205ENST00000553474 ANKRD24Q8TF21 1146 aa15.77■□□□□ 0.11
SHMT2-205ENST00000553474 NECTIN2Q92692 538 aa15.77■□□□□ 0.11
SHMT2-205ENST00000553474 KIF1BPQ96EK5 621 aa15.77■□□□□ 0.11
SHMT2-205ENST00000553474 PHAXQ9H814 394 aaKnown RBP15.77■□□□□ 0.11
SHMT2-205ENST00000553474 LGR6Q9HBX8 967 aa15.77■□□□□ 0.11
SHMT2-205ENST00000553474 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.76■□□□□ 0.11
SHMT2-205ENST00000553474 SLIT2O94813 1529 aa15.76■□□□□ 0.11
SHMT2-205ENST00000553474 ERBB3P21860 1342 aa15.75■□□□□ 0.11
SHMT2-205ENST00000553474 CHMLP26374 656 aa15.75■□□□□ 0.11
SHMT2-205ENST00000553474 AFF2P51816 1311 aa15.75■□□□□ 0.11
SHMT2-205ENST00000553474 EVA1CP58658 441 aa15.75■□□□□ 0.11
SHMT2-205ENST00000553474 FAM43AQ8N2R8 423 aa15.75■□□□□ 0.11
SHMT2-205ENST00000553474 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
SHMT2-205ENST00000553474 CYP2E1P05181 493 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-205ENST00000553474 PPP1R42Q7Z4L9 355 aa15.75■□□□□ 0.11
SHMT2-205ENST00000553474 PI4KAP2A4QPH2 592 aa15.74■□□□□ 0.11
SHMT2-205ENST00000553474 EIF2S2P20042 333 aaKnown RBP15.74■□□□□ 0.11
SHMT2-205ENST00000553474 PI4KAP1Q8N8J0 262 aa15.74■□□□□ 0.11
SHMT2-205ENST00000553474 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
SHMT2-205ENST00000553474 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
SHMT2-205ENST00000553474 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-205ENST00000553474 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
SHMT2-205ENST00000553474 NLRP2Q9NX02 1062 aa15.73■□□□□ 0.11
SHMT2-205ENST00000553474 WNK3Q9BYP7 1800 aa15.73■□□□□ 0.11
SHMT2-205ENST00000553474 SCN11AQ9UI33 1791 aa15.73■□□□□ 0.11
SHMT2-205ENST00000553474 ADCY9O60503 1353 aa15.73■□□□□ 0.11
SHMT2-205ENST00000553474 TTC41PQ6P2S7 1318 aa15.72■□□□□ 0.11
SHMT2-205ENST00000553474 TRIM6-TRIM34B2RNG4 842 aa15.72■□□□□ 0.11
SHMT2-205ENST00000553474 SRGAP3O43295 1099 aa15.72■□□□□ 0.11
SHMT2-205ENST00000553474 SURF6O75683 361 aaKnown RBP15.72■□□□□ 0.11
SHMT2-205ENST00000553474 KLHL40Q2TBA0 621 aa15.72■□□□□ 0.11
SHMT2-205ENST00000553474 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
SHMT2-205ENST00000553474 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHMT2-205ENST00000553474 USP21Q9UK80 565 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms