RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 TEFQ10587 303 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 ZNF827Q17R98 1081 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 SLC27A3Q5K4L6 730 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 ZNF790Q6PG37 636 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 AMIGO3Q86WK7 504 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 LINC00116Q8NCU8 138 aa10.11□□□□□ -0.79
NPAS3-213ENST00000552874 RTF1Q92541 710 aaKnown RBP10.11□□□□□ -0.79
NPAS3-213ENST00000552874 SMARCC1Q92922 1105 aaPredicted RBP10.11□□□□□ -0.79
NPAS3-213ENST00000552874 IL16Q14005 1332 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 SENP3-EIF4A1A0A087X0R7 540 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 CHL1O00533 1208 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 NEFMP07197 916 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 KCNQ4P56696 695 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 ZNF496Q96IT1 587 aaPredicted RBP10.1□□□□□ -0.79
NPAS3-213ENST00000552874 BABAM1Q9NWV8 329 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 UTRNP46939 3433 aa10.1□□□□□ -0.79
NPAS3-213ENST00000552874 CNTNAP4Q9C0A0 1308 aa10.09□□□□□ -0.79
NPAS3-213ENST00000552874 BRCA1P38398 1863 aaKnown RBP10.09□□□□□ -0.79
NPAS3-213ENST00000552874 BTBD11A6QL63 1104 aa10.09□□□□□ -0.79
NPAS3-213ENST00000552874 PITPNM1O00562 1244 aa10.09□□□□□ -0.79
NPAS3-213ENST00000552874 SF3B2Q13435 895 aaKnown RBP10.09□□□□□ -0.79
NPAS3-213ENST00000552874 TAF7Q15545 349 aaPredicted RBP10.09□□□□□ -0.79
NPAS3-213ENST00000552874 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
NPAS3-213ENST00000552874 IFT57Q9NWB7 429 aa10.09□□□□□ -0.79
NPAS3-213ENST00000552874 CCNL1Q9UK58 526 aaPredicted RBP10.09□□□□□ -0.79
NPAS3-213ENST00000552874 LAMB2P55268 1798 aa10.09□□□□□ -0.79
NPAS3-213ENST00000552874 ANKRD31Q8N7Z5 1873 aa10.08□□□□□ -0.8
NPAS3-213ENST00000552874 PRAMEF22A3QJZ6 481 aa10.08□□□□□ -0.8
NPAS3-213ENST00000552874 EIF4A1P60842 406 aaKnown RBP10.08□□□□□ -0.8
NPAS3-213ENST00000552874 NGEFQ8N5V2 710 aa10.08□□□□□ -0.8
NPAS3-213ENST00000552874 CFAP44Q96MT7 982 aa10.08□□□□□ -0.8
NPAS3-213ENST00000552874 MIS18AQ9NYP9 233 aa10.08□□□□□ -0.8
NPAS3-213ENST00000552874 DLEC1Q9Y238 1755 aa10.08□□□□□ -0.8
NPAS3-213ENST00000552874 KRT24Q2M2I5 525 aa10.07□□□□□ -0.8
NPAS3-213ENST00000552874 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
NPAS3-213ENST00000552874 PNPLA7Q6ZV29 1317 aa10.07□□□□□ -0.8
NPAS3-213ENST00000552874 FANCIQ9NVI1 1328 aa10.07□□□□□ -0.8
NPAS3-213ENST00000552874 PTCD1O75127 700 aaKnown RBP10.06□□□□□ -0.8
NPAS3-213ENST00000552874 CYP19A1P11511 503 aaPredicted RBP10.06□□□□□ -0.8
NPAS3-213ENST00000552874 INTS5Q6P9B9 1019 aaKnown RBP10.06□□□□□ -0.8
NPAS3-213ENST00000552874 LRP10Q7Z4F1 713 aa10.06□□□□□ -0.8
NPAS3-213ENST00000552874 WDR63Q8IWG1 891 aa10.06□□□□□ -0.8
NPAS3-213ENST00000552874 DNAJC10Q8IXB1 793 aa10.06□□□□□ -0.8
NPAS3-213ENST00000552874 FMNL2Q96PY5 1086 aa10.06□□□□□ -0.8
NPAS3-213ENST00000552874 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
NPAS3-213ENST00000552874 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
NPAS3-213ENST00000552874 GIGYF1O75420 1035 aaPredicted RBP10.05□□□□□ -0.8
NPAS3-213ENST00000552874 ATP6V1AP38606 617 aa10.05□□□□□ -0.8
NPAS3-213ENST00000552874 SLC15A2Q16348 729 aa10.05□□□□□ -0.8
NPAS3-213ENST00000552874 TRMT2AQ8IZ69 625 aaKnown RBP10.05□□□□□ -0.8
NPAS3-213ENST00000552874 SOS1Q07889 1333 aaPredicted RBP10.05□□□□□ -0.8
NPAS3-213ENST00000552874 ZBED9Q6R2W3 1325 aa10.05□□□□□ -0.8
NPAS3-213ENST00000552874 CRKLP46109 303 aaKnown RBP10.04□□□□□ -0.8
NPAS3-213ENST00000552874 GNAI1P63096 354 aa10.04□□□□□ -0.8
NPAS3-213ENST00000552874 RC3H1Q5TC82 1133 aaKnown RBP10.04□□□□□ -0.8
NPAS3-213ENST00000552874 TTC5Q8N0Z6 440 aa10.04□□□□□ -0.8
NPAS3-213ENST00000552874 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
NPAS3-213ENST00000552874 TSR2Q969E8 191 aaKnown RBP10.04□□□□□ -0.8
NPAS3-213ENST00000552874 PDGFDQ9GZP0 370 aaPredicted RBP10.04□□□□□ -0.8
NPAS3-213ENST00000552874 ZBTB1Q9Y2K1 713 aa10.04□□□□□ -0.8
NPAS3-213ENST00000552874 DDX60Q8IY21 1712 aaKnown RBP10.04□□□□□ -0.8
NPAS3-213ENST00000552874 MYH3P11055 1940 aa10.03□□□□□ -0.8
NPAS3-213ENST00000552874 COL15A1P39059 1388 aa10.03□□□□□ -0.8
NPAS3-213ENST00000552874 HOXB7P09629 217 aa10.03□□□□□ -0.8
NPAS3-213ENST00000552874 CALD1Q05682 793 aaKnown RBP10.03□□□□□ -0.8
NPAS3-213ENST00000552874 PDIA6Q15084 440 aa10.03□□□□□ -0.8
NPAS3-213ENST00000552874 SMIM5Q71RC9 77 aa10.03□□□□□ -0.8
NPAS3-213ENST00000552874 USP16Q9Y5T5 823 aa10.03□□□□□ -0.8
NPAS3-213ENST00000552874 TNRC6CQ9HCJ0 1690 aaKnown RBP10.02□□□□□ -0.8
NPAS3-213ENST00000552874 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 SNRPA1P09661 255 aaKnown RBP10.02□□□□□ -0.81
NPAS3-213ENST00000552874 SLFN5Q08AF3 891 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 NBPF14Q5TI25 921 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
NPAS3-213ENST00000552874 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 TSPYL6Q8N831 410 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 C8orf58Q8NAV2 365 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 CCDC87Q9NVE4 849 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 SSUH2Q9Y2M2 353 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 SALL2Q9Y467 1007 aaPredicted RBP10.02□□□□□ -0.81
NPAS3-213ENST00000552874 CACNA1SQ13698 1873 aa10.02□□□□□ -0.81
NPAS3-213ENST00000552874 SSFA2P28290 1259 aa10.01□□□□□ -0.81
NPAS3-213ENST00000552874 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
NPAS3-213ENST00000552874 EIF5P55010 431 aaKnown RBP10.01□□□□□ -0.81
NPAS3-213ENST00000552874 R3HDM1Q15032 1099 aaKnown RBP10.01□□□□□ -0.81
NPAS3-213ENST00000552874 DUSP27Q5VZP5 1158 aa10.01□□□□□ -0.81
NPAS3-213ENST00000552874 CDCA7LQ96GN5 454 aa10.01□□□□□ -0.81
NPAS3-213ENST00000552874 ERBB4Q15303 1308 aa10.01□□□□□ -0.81
NPAS3-213ENST00000552874 PSDA5PKW4 1024 aaPredicted RBP10□□□□□ -0.81
NPAS3-213ENST00000552874 GNPATO15228 680 aa10□□□□□ -0.81
NPAS3-213ENST00000552874 RPS6KA4O75676 772 aa10□□□□□ -0.81
NPAS3-213ENST00000552874 A1BGP04217 495 aa10□□□□□ -0.81
NPAS3-213ENST00000552874 HNRNPUQ00839 825 aaKnown RBP eCLIP10□□□□□ -0.81
NPAS3-213ENST00000552874 PROSER3Q2NL68 480 aa10□□□□□ -0.81
NPAS3-213ENST00000552874 COL23A1Q86Y22 540 aaPredicted RBP10□□□□□ -0.81
NPAS3-213ENST00000552874 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
NPAS3-213ENST00000552874 STK32BQ9NY57 414 aa10□□□□□ -0.81
NPAS3-213ENST00000552874 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.99□□□□□ -0.81
NPAS3-213ENST00000552874 E9PSI1 815 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms