RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 SLC16A10Q8TF71 515 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 HINFPQ9BQA5 517 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 GPAMQ9HCL2 828 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 PARP3Q9Y6F1 533 aa6.05□□□□□ -1.44
NPAS3-212ENST00000552696 MSX1P28360 303 aa6.04□□□□□ -1.44
NPAS3-212ENST00000552696 PSMA6P60900 246 aaKnown RBP6.04□□□□□ -1.44
NPAS3-212ENST00000552696 TMEM164Q5U3C3 297 aa6.04□□□□□ -1.44
NPAS3-212ENST00000552696 C21orf2O43822 256 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 PPP1R12BO60237 982 aaPredicted RBP6.03□□□□□ -1.44
NPAS3-212ENST00000552696 PPP1R15AO75807 674 aaPredicted RBP6.03□□□□□ -1.44
NPAS3-212ENST00000552696 F11P03951 625 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 VSIG8P0DPA2 414 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 ATP4AP20648 1035 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 TEAD4Q15561 434 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 NBPF1Q3BBV0 1214 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 SH3PXD2AQ5TCZ1 1133 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 TREML4Q6UXN2 200 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 GAS2L2Q8NHY3 880 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 SCG3Q8WXD2 468 aaKnown RBP6.03□□□□□ -1.44
NPAS3-212ENST00000552696 L3MBTL2Q969R5 705 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 AIDAQ96BJ3 306 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 RUBCNLQ9H714 662 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 ZNF232Q9UNY5 417 aa6.03□□□□□ -1.44
NPAS3-212ENST00000552696 ACIN1Q9UKV3 1341 aaKnown RBP6.02□□□□□ -1.45
NPAS3-212ENST00000552696 SERTM1A2A2V5 107 aa6.02□□□□□ -1.45
NPAS3-212ENST00000552696 EML1O00423 815 aa6.02□□□□□ -1.45
NPAS3-212ENST00000552696 NOS2P35228 1153 aa6.02□□□□□ -1.45
NPAS3-212ENST00000552696 TXLNAP40222 546 aa6.02□□□□□ -1.45
NPAS3-212ENST00000552696 LCE2AQ5TA79 106 aaPredicted RBP6.02□□□□□ -1.45
NPAS3-212ENST00000552696 TRIM22Q8IYM9 498 aa6.02□□□□□ -1.45
NPAS3-212ENST00000552696 VWA5B2Q8N398 1253 aa6.02□□□□□ -1.45
NPAS3-212ENST00000552696 IRF7Q92985 503 aa6.02□□□□□ -1.45
NPAS3-212ENST00000552696 ZNF837Q96EG3 531 aaPredicted RBP6.02□□□□□ -1.45
NPAS3-212ENST00000552696 THBS1P07996 1170 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 TATP17735 454 aaPredicted RBP6.01□□□□□ -1.45
NPAS3-212ENST00000552696 IGFBP4P22692 258 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 FAM69CQ0P6D2 419 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 DBN1Q16643 649 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 SWI5Q1ZZU3 235 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 SV2AQ7L0J3 742 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 CHMP7Q8WUX9 453 aaPredicted RBP6.01□□□□□ -1.45
NPAS3-212ENST00000552696 NANOS1Q8WY41 292 aaKnown RBP6.01□□□□□ -1.45
NPAS3-212ENST00000552696 NUCKS1Q9H1E3 243 aaKnown RBP6.01□□□□□ -1.45
NPAS3-212ENST00000552696 ZDHHC3Q9NYG2 299 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 CHMP3Q9Y3E7 222 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 ATAD2Q6PL18 1390 aa6.01□□□□□ -1.45
NPAS3-212ENST00000552696 PRMT3O60678 531 aa6□□□□□ -1.45
NPAS3-212ENST00000552696 CSB-PGBD3P0DP91 1061 aa6□□□□□ -1.45
NPAS3-212ENST00000552696 WEE1P30291 646 aa6□□□□□ -1.45
NPAS3-212ENST00000552696 HIRAP54198 1017 aaPredicted RBP6□□□□□ -1.45
NPAS3-212ENST00000552696 POTEAQ6S8J7 498 aa6□□□□□ -1.45
NPAS3-212ENST00000552696 PGBD3Q8N328 593 aa6□□□□□ -1.45
NPAS3-212ENST00000552696 GPR161Q8N6U8 529 aaKnown RBP6□□□□□ -1.45
NPAS3-212ENST00000552696 C1orf216Q8TAB5 229 aa6□□□□□ -1.45
NPAS3-212ENST00000552696 GTPBP3Q969Y2 492 aaKnown RBP6□□□□□ -1.45
NPAS3-212ENST00000552696 PRIMPOLQ96LW4 560 aa6□□□□□ -1.45
NPAS3-212ENST00000552696 C2orf49Q9BVC5 232 aaPredicted RBP6□□□□□ -1.45
NPAS3-212ENST00000552696 H7C1W4 665 aa5.99□□□□□ -1.45
NPAS3-212ENST00000552696 GPR25O00155 361 aa5.99□□□□□ -1.45
NPAS3-212ENST00000552696 GMPRP36959 345 aa5.99□□□□□ -1.45
NPAS3-212ENST00000552696 GMCL1Q96IK5 515 aa5.99□□□□□ -1.45
NPAS3-212ENST00000552696 CRISPLD1Q9H336 500 aa5.99□□□□□ -1.45
NPAS3-212ENST00000552696 LBRQ14739 615 aaKnown RBP5.98□□□□□ -1.45
NPAS3-212ENST00000552696 OCLNQ16625 522 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 ARSJQ5FYB0 599 aaPredicted RBP5.98□□□□□ -1.45
NPAS3-212ENST00000552696 EFHC2Q5JST6 749 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 BICDL1Q6ZP65 573 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 STAG2Q8N3U4 1231 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 KLRG1Q96E93 195 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 PHACTR1Q9C0D0 580 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 SLAIN2Q9P270 581 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 HCN4Q9Y3Q4 1203 aa5.98□□□□□ -1.45
NPAS3-212ENST00000552696 A0A1W2PNR3 127 aa5.97□□□□□ -1.45
NPAS3-212ENST00000552696 TMEM88BA6NKF7 163 aa5.97□□□□□ -1.45
NPAS3-212ENST00000552696 FOXO3O43524 673 aa5.97□□□□□ -1.45
NPAS3-212ENST00000552696 FKBP5Q13451 457 aaPredicted RBP5.97□□□□□ -1.45
NPAS3-212ENST00000552696 RHPN1Q8TCX5 695 aa5.97□□□□□ -1.45
NPAS3-212ENST00000552696 CLP1Q92989 425 aaKnown RBP5.97□□□□□ -1.45
NPAS3-212ENST00000552696 NGLY1Q96IV0 654 aa5.97□□□□□ -1.45
NPAS3-212ENST00000552696 ZIC5Q96T25 663 aa5.97□□□□□ -1.45
NPAS3-212ENST00000552696 KRT76Q01546 638 aa5.96□□□□□ -1.46
NPAS3-212ENST00000552696 UBAP2LQ14157 1087 aaKnown RBP5.96□□□□□ -1.46
NPAS3-212ENST00000552696 GAS6Q14393 721 aa5.96□□□□□ -1.46
NPAS3-212ENST00000552696 RNFT1Q5M7Z0 435 aa5.96□□□□□ -1.46
NPAS3-212ENST00000552696 FOXR1Q6PIV2 292 aa5.96□□□□□ -1.46
NPAS3-212ENST00000552696 ALDH16A1Q8IZ83 802 aa5.96□□□□□ -1.46
NPAS3-212ENST00000552696 COL25A1Q9BXS0 654 aaPredicted RBP5.96□□□□□ -1.46
NPAS3-212ENST00000552696 CXXC1Q9P0U4 656 aaPredicted RBP5.96□□□□□ -1.46
NPAS3-212ENST00000552696 GJA3Q9Y6H8 435 aa5.96□□□□□ -1.46
NPAS3-212ENST00000552696 CARNS1A5YM72 827 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 ATP2B4P23634 1241 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 C1orf53Q5VUE5 145 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 NLRP8Q86W28 1048 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 C7orf43Q8WVR3 580 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 VTI1AQ96AJ9 217 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 HSH2DQ96JZ2 352 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 TRERF1Q96PN7 1200 aa5.95□□□□□ -1.46
NPAS3-212ENST00000552696 GPC6Q9Y625 555 aaPredicted RBP5.95□□□□□ -1.46
NPAS3-212ENST00000552696 WIPF1O43516 503 aa5.94□□□□□ -1.46
NPAS3-212ENST00000552696 RTN1Q16799 776 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms