RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 BTBD11A6QL63 1104 aa11.98□□□□□ -0.49
CCDC59-207ENST00000552606 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
CCDC59-207ENST00000552606 ZNF496Q96IT1 587 aaPredicted RBP11.98□□□□□ -0.49
CCDC59-207ENST00000552606 CNTNAP4Q9C0A0 1308 aa11.97□□□□□ -0.49
CCDC59-207ENST00000552606 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
CCDC59-207ENST00000552606 PTCD1O75127 700 aaKnown RBP11.97□□□□□ -0.49
CCDC59-207ENST00000552606 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
CCDC59-207ENST00000552606 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
CCDC59-207ENST00000552606 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
CCDC59-207ENST00000552606 VSIG10Q8N0Z9 540 aa11.97□□□□□ -0.49
CCDC59-207ENST00000552606 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
CCDC59-207ENST00000552606 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
CCDC59-207ENST00000552606 TTC5Q8N0Z6 440 aa11.96□□□□□ -0.49
CCDC59-207ENST00000552606 ANKRD36CQ5JPF3 1778 aa11.96□□□□□ -0.49
CCDC59-207ENST00000552606 CHL1O00533 1208 aa11.95□□□□□ -0.5
CCDC59-207ENST00000552606 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
CCDC59-207ENST00000552606 AMIGO3Q86WK7 504 aa11.95□□□□□ -0.5
CCDC59-207ENST00000552606 NGEFQ8N5V2 710 aa11.95□□□□□ -0.5
CCDC59-207ENST00000552606 FMNL2Q96PY5 1086 aa11.95□□□□□ -0.5
CCDC59-207ENST00000552606 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
CCDC59-207ENST00000552606 NUP98P52948 1817 aa11.95□□□□□ -0.5
CCDC59-207ENST00000552606 IL16Q14005 1332 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 PNPLA7Q6ZV29 1317 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
CCDC59-207ENST00000552606 DNAJC10Q8IXB1 793 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 STK32BQ9NY57 414 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 TSPYL4Q9UJ04 414 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 ARFGEF2Q9Y6D5 1785 aa11.94□□□□□ -0.5
CCDC59-207ENST00000552606 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
CCDC59-207ENST00000552606 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
CCDC59-207ENST00000552606 CYP19A1P11511 503 aaPredicted RBP11.93□□□□□ -0.5
CCDC59-207ENST00000552606 CRKLP46109 303 aaKnown RBP11.93□□□□□ -0.5
CCDC59-207ENST00000552606 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
CCDC59-207ENST00000552606 R3HDM1Q15032 1099 aaKnown RBP11.93□□□□□ -0.5
CCDC59-207ENST00000552606 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
CCDC59-207ENST00000552606 MBIPQ9NS73 344 aa11.93□□□□□ -0.5
CCDC59-207ENST00000552606 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
CCDC59-207ENST00000552606 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
CCDC59-207ENST00000552606 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
CCDC59-207ENST00000552606 PSDA5PKW4 1024 aaPredicted RBP11.92□□□□□ -0.5
CCDC59-207ENST00000552606 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
CCDC59-207ENST00000552606 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
CCDC59-207ENST00000552606 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
CCDC59-207ENST00000552606 RC3H1Q5TC82 1133 aaKnown RBP11.92□□□□□ -0.5
CCDC59-207ENST00000552606 SOS1Q07889 1333 aaPredicted RBP11.91□□□□□ -0.5
CCDC59-207ENST00000552606 GIGYF1O75420 1035 aaPredicted RBP11.91□□□□□ -0.5
CCDC59-207ENST00000552606 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
CCDC59-207ENST00000552606 GNAI1P63096 354 aa11.91□□□□□ -0.5
CCDC59-207ENST00000552606 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
CCDC59-207ENST00000552606 WDR63Q8IWG1 891 aa11.91□□□□□ -0.5
CCDC59-207ENST00000552606 AK7Q96M32 723 aa11.91□□□□□ -0.5
CCDC59-207ENST00000552606 PDGFDQ9GZP0 370 aaPredicted RBP11.91□□□□□ -0.5
CCDC59-207ENST00000552606 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
CCDC59-207ENST00000552606 COL15A1P39059 1388 aa11.91□□□□□ -0.5
CCDC59-207ENST00000552606 FANCIQ9NVI1 1328 aa11.9□□□□□ -0.5
CCDC59-207ENST00000552606 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
CCDC59-207ENST00000552606 GNPATO15228 680 aa11.9□□□□□ -0.5
CCDC59-207ENST00000552606 SNRPA1P09661 255 aaKnown RBP11.9□□□□□ -0.5
CCDC59-207ENST00000552606 SSFA2P28290 1259 aa11.9□□□□□ -0.5
CCDC59-207ENST00000552606 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
CCDC59-207ENST00000552606 KIAA1551Q9HCM1 1747 aa11.9□□□□□ -0.5
CCDC59-207ENST00000552606 CCDC87Q9NVE4 849 aa11.9□□□□□ -0.5
CCDC59-207ENST00000552606 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
CCDC59-207ENST00000552606 USP16Q9Y5T5 823 aa11.9□□□□□ -0.5
CCDC59-207ENST00000552606 LHX8Q68G74 356 aa11.89□□□□□ -0.51
CCDC59-207ENST00000552606 SMIM5Q71RC9 77 aa11.89□□□□□ -0.51
CCDC59-207ENST00000552606 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
CCDC59-207ENST00000552606 TEX13AQ9BXU3 409 aaPredicted RBP11.89□□□□□ -0.51
CCDC59-207ENST00000552606 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
CCDC59-207ENST00000552606 LAS1LQ9Y4W2 734 aaKnown RBP11.89□□□□□ -0.51
CCDC59-207ENST00000552606 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
CCDC59-207ENST00000552606 HOXB7P09629 217 aa11.88□□□□□ -0.51
CCDC59-207ENST00000552606 COL23A1Q86Y22 540 aaPredicted RBP11.88□□□□□ -0.51
CCDC59-207ENST00000552606 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
CCDC59-207ENST00000552606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.87□□□□□ -0.51
CCDC59-207ENST00000552606 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
CCDC59-207ENST00000552606 STARD3NLO95772 234 aa11.87□□□□□ -0.51
CCDC59-207ENST00000552606 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
CCDC59-207ENST00000552606 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
CCDC59-207ENST00000552606 BRCA1P38398 1863 aaKnown RBP11.87□□□□□ -0.51
CCDC59-207ENST00000552606 ANKRD31Q8N7Z5 1873 aa11.87□□□□□ -0.51
CCDC59-207ENST00000552606 NBPF26B4DH59 902 aa11.86□□□□□ -0.51
CCDC59-207ENST00000552606 PHF14O94880 888 aa11.86□□□□□ -0.51
CCDC59-207ENST00000552606 A1BGP04217 495 aa11.86□□□□□ -0.51
CCDC59-207ENST00000552606 EIF5P55010 431 aaKnown RBP11.86□□□□□ -0.51
CCDC59-207ENST00000552606 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
CCDC59-207ENST00000552606 LRP10Q7Z4F1 713 aa11.86□□□□□ -0.51
CCDC59-207ENST00000552606 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
CCDC59-207ENST00000552606 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
CCDC59-207ENST00000552606 LAMB2P55268 1798 aa11.86□□□□□ -0.51
CCDC59-207ENST00000552606 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
CCDC59-207ENST00000552606 GABBR2O75899 941 aa11.85□□□□□ -0.51
CCDC59-207ENST00000552606 IL6STP40189 918 aaPredicted RBP11.85□□□□□ -0.51
CCDC59-207ENST00000552606 PIP4K2AP48426 406 aaPredicted RBP11.85□□□□□ -0.51
CCDC59-207ENST00000552606 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
CCDC59-207ENST00000552606 TSPYL6Q8N831 410 aa11.85□□□□□ -0.51
CCDC59-207ENST00000552606 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
CCDC59-207ENST00000552606 FLAD1Q8NFF5 587 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms