RNA–Protein interactions for RNA: ENST00000551630.1

PTCH1-224, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-224ENST00000551630 GNPATO15228 680 aa19.88■□□□□ 0.77
PTCH1-224ENST00000551630 MYH14Q7Z406 1995 aaKnown RBP19.87■□□□□ 0.77
PTCH1-224ENST00000551630 GOLGA2Q08379 1002 aa19.87■□□□□ 0.77
PTCH1-224ENST00000551630 INTS5Q6P9B9 1019 aaKnown RBP19.87■□□□□ 0.77
PTCH1-224ENST00000551630 TEX13AQ9BXU3 409 aaPredicted RBP19.87■□□□□ 0.77
PTCH1-224ENST00000551630 TFCP2L1Q9NZI6 479 aa19.87■□□□□ 0.77
PTCH1-224ENST00000551630 PHF14O94880 888 aa19.86■□□□□ 0.77
PTCH1-224ENST00000551630 STARD3NLO95772 234 aa19.86■□□□□ 0.77
PTCH1-224ENST00000551630 CDCA7LQ96GN5 454 aa19.86■□□□□ 0.77
PTCH1-224ENST00000551630 CCDC87Q9NVE4 849 aa19.86■□□□□ 0.77
PTCH1-224ENST00000551630 ZBTB1Q9Y2K1 713 aa19.86■□□□□ 0.77
PTCH1-224ENST00000551630 PNPLA7Q6ZV29 1317 aa19.85■□□□□ 0.77
PTCH1-224ENST00000551630 A1BGP04217 495 aa19.85■□□□□ 0.77
PTCH1-224ENST00000551630 HMGB2P26583 209 aaKnown RBP19.85■□□□□ 0.77
PTCH1-224ENST00000551630 PIP4K2AP48426 406 aaPredicted RBP19.85■□□□□ 0.77
PTCH1-224ENST00000551630 RC3H1Q5TC82 1133 aaKnown RBP19.85■□□□□ 0.77
PTCH1-224ENST00000551630 MYH16Q9H6N6 1097 aa19.85■□□□□ 0.77
PTCH1-224ENST00000551630 UBR3Q6ZT12 1888 aa19.85■□□□□ 0.77
PTCH1-224ENST00000551630 ELL2O00472 640 aaPredicted RBP19.84■□□□□ 0.77
PTCH1-224ENST00000551630 EIF2S2P20042 333 aaKnown RBP19.84■□□□□ 0.77
PTCH1-224ENST00000551630 DUSP27Q5VZP5 1158 aa19.84■□□□□ 0.77
PTCH1-224ENST00000551630 C8orf58Q8NAV2 365 aa19.84■□□□□ 0.77
PTCH1-224ENST00000551630 QSER1Q2KHR3 1735 aa19.83■□□□□ 0.77
PTCH1-224ENST00000551630 E9PSI1 815 aa19.83■□□□□ 0.77
PTCH1-224ENST00000551630 CANXP27824 592 aaKnown RBP19.83■□□□□ 0.77
PTCH1-224ENST00000551630 TSPYL6Q8N831 410 aa19.83■□□□□ 0.77
PTCH1-224ENST00000551630 NECTIN2Q92692 538 aa19.83■□□□□ 0.77
PTCH1-224ENST00000551630 PDGFDQ9GZP0 370 aaPredicted RBP19.83■□□□□ 0.77
PTCH1-224ENST00000551630 RTCBQ9Y3I0 505 aaKnown RBP19.83■□□□□ 0.77
PTCH1-224ENST00000551630 ZBED9Q6R2W3 1325 aa19.82■□□□□ 0.76
PTCH1-224ENST00000551630 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.82■□□□□ 0.76
PTCH1-224ENST00000551630 RPS6KA4O75676 772 aa19.82■□□□□ 0.76
PTCH1-224ENST00000551630 SLFN5Q08AF3 891 aa19.82■□□□□ 0.76
PTCH1-224ENST00000551630 SOS1Q07889 1333 aaPredicted RBP19.81■□□□□ 0.76
PTCH1-224ENST00000551630 SSFA2P28290 1259 aa19.81■□□□□ 0.76
PTCH1-224ENST00000551630 EXOSC9Q06265 439 aaKnown RBP19.81■□□□□ 0.76
PTCH1-224ENST00000551630 COL23A1Q86Y22 540 aaPredicted RBP19.81■□□□□ 0.76
PTCH1-224ENST00000551630 ZNF330Q9Y3S2 320 aaPredicted RBP19.81■□□□□ 0.76
PTCH1-224ENST00000551630 CASZ1Q86V15 1759 aa19.8■□□□□ 0.76
PTCH1-224ENST00000551630 NBPF26B4DH59 902 aa19.8■□□□□ 0.76
PTCH1-224ENST00000551630 MSH5O43196 834 aa19.8■□□□□ 0.76
PTCH1-224ENST00000551630 NBPF10Q6P3W6 841 aaKnown RBP19.8■□□□□ 0.76
PTCH1-224ENST00000551630 NBPF15Q8N660 670 aa19.8■□□□□ 0.76
PTCH1-224ENST00000551630 HOXB7P09629 217 aa19.79■□□□□ 0.76
PTCH1-224ENST00000551630 TWISTNBQ3B726 338 aaPredicted RBP19.79■□□□□ 0.76
PTCH1-224ENST00000551630 HDGFL1Q5TGJ6 251 aa19.79■□□□□ 0.76
PTCH1-224ENST00000551630 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
PTCH1-224ENST00000551630 COL15A1P39059 1388 aa19.79■□□□□ 0.76
PTCH1-224ENST00000551630 C4AP0C0L4 1744 aa19.79■□□□□ 0.76
PTCH1-224ENST00000551630 ANXA1P04083 346 aa19.77■□□□□ 0.76
PTCH1-224ENST00000551630 MYL6BP14649 208 aa19.77■□□□□ 0.76
PTCH1-224ENST00000551630 PROSER3Q2NL68 480 aa19.77■□□□□ 0.76
PTCH1-224ENST00000551630 TRAPPC3LQ5T215 181 aa19.77■□□□□ 0.76
PTCH1-224ENST00000551630 ARHGEF1Q92888 912 aaKnown RBP19.77■□□□□ 0.76
PTCH1-224ENST00000551630 ADRA2BP18089 450 aa19.76■□□□□ 0.75
PTCH1-224ENST00000551630 IL6STP40189 918 aaPredicted RBP19.76■□□□□ 0.75
PTCH1-224ENST00000551630 EIF5P55010 431 aaKnown RBP19.76■□□□□ 0.75
PTCH1-224ENST00000551630 TRMT2AQ8IZ69 625 aaKnown RBP19.76■□□□□ 0.75
PTCH1-224ENST00000551630 FLAD1Q8NFF5 587 aa19.76■□□□□ 0.75
PTCH1-224ENST00000551630 CHPF2Q9P2E5 772 aa19.76■□□□□ 0.75
PTCH1-224ENST00000551630 ERBB4Q15303 1308 aa19.76■□□□□ 0.75
PTCH1-224ENST00000551630 TCERG1O14776 1098 aaKnown RBP19.75■□□□□ 0.75
PTCH1-224ENST00000551630 PDIA6Q15084 440 aa19.75■□□□□ 0.75
PTCH1-224ENST00000551630 ZBTB7AO95365 584 aa19.74■□□□□ 0.75
PTCH1-224ENST00000551630 RFC4P35249 363 aa19.74■□□□□ 0.75
PTCH1-224ENST00000551630 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
PTCH1-224ENST00000551630 VAMP4O75379 141 aa19.73■□□□□ 0.75
PTCH1-224ENST00000551630 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
PTCH1-224ENST00000551630 ARXQ96QS3 562 aa19.73■□□□□ 0.75
PTCH1-224ENST00000551630 LRP10Q7Z4F1 713 aa19.72■□□□□ 0.75
PTCH1-224ENST00000551630 NPM2Q86SE8 214 aaKnown RBP19.72■□□□□ 0.75
PTCH1-224ENST00000551630 DDX21Q9NR30 783 aaKnown RBP eCLIP19.72■□□□□ 0.75
PTCH1-224ENST00000551630 TBC1D2BQ9UPU7 963 aa19.72■□□□□ 0.75
PTCH1-224ENST00000551630 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
PTCH1-224ENST00000551630 A0A087WZG4 1122 aa19.71■□□□□ 0.75
PTCH1-224ENST00000551630 CCDC30Q5VVM6 783 aa19.71■□□□□ 0.75
PTCH1-224ENST00000551630 USPL1Q5W0Q7 1092 aa19.71■□□□□ 0.75
PTCH1-224ENST00000551630 DZIP3Q86Y13 1208 aaKnown RBP19.71■□□□□ 0.75
PTCH1-224ENST00000551630 SCN7AQ01118 1682 aa19.71■□□□□ 0.75
PTCH1-224ENST00000551630 TTLL7Q6ZT98 887 aa19.7■□□□□ 0.74
PTCH1-224ENST00000551630 DBF4Q9UBU7 674 aaPredicted RBP19.7■□□□□ 0.74
PTCH1-224ENST00000551630 NARFQ9UHQ1 456 aa19.7■□□□□ 0.74
PTCH1-224ENST00000551630 ATF5Q9Y2D1 282 aaPredicted RBP19.7■□□□□ 0.74
PTCH1-224ENST00000551630 ZPR1O75312 459 aa19.69■□□□□ 0.74
PTCH1-224ENST00000551630 GYS1P13807 737 aa19.69■□□□□ 0.74
PTCH1-224ENST00000551630 SLC16A10Q8TF71 515 aa19.69■□□□□ 0.74
PTCH1-224ENST00000551630 BCORQ6W2J9 1755 aa19.68■□□□□ 0.74
PTCH1-224ENST00000551630 CAMTA2O94983 1202 aa19.68■□□□□ 0.74
PTCH1-224ENST00000551630 AIMP1Q12904 312 aaKnown RBP19.68■□□□□ 0.74
PTCH1-224ENST00000551630 XAGE3Q8WTP9 111 aa19.68■□□□□ 0.74
PTCH1-224ENST00000551630 MTFR1LQ9H019 292 aa19.68■□□□□ 0.74
PTCH1-224ENST00000551630 BCL2L12Q9HB09 334 aa19.68■□□□□ 0.74
PTCH1-224ENST00000551630 FKBP8Q14318 412 aa19.67■□□□□ 0.74
PTCH1-224ENST00000551630 COPS6Q7L5N1 327 aa19.67■□□□□ 0.74
PTCH1-224ENST00000551630 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
PTCH1-224ENST00000551630 PHAXQ9H814 394 aaKnown RBP19.67■□□□□ 0.74
PTCH1-224ENST00000551630 KIF6Q6ZMV9 814 aa19.66■□□□□ 0.74
PTCH1-224ENST00000551630 CHMP4AQ9BY43 222 aa19.66■□□□□ 0.74
PTCH1-224ENST00000551630 ZBTB3Q9H5J0 574 aa19.66■□□□□ 0.74
PTCH1-224ENST00000551630 HYPKQ9NX55 129 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms