RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
TROAP-213ENST00000550709 CHL1O00533 1208 aa17.95■□□□□ 0.46
TROAP-213ENST00000550709 ADRA2BP18089 450 aa17.95■□□□□ 0.46
TROAP-213ENST00000550709 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
TROAP-213ENST00000550709 POLD1P28340 1107 aa17.94■□□□□ 0.46
TROAP-213ENST00000550709 SRP68Q9UHB9 627 aaKnown RBP17.94■□□□□ 0.46
TROAP-213ENST00000550709 SOS1Q07889 1333 aaPredicted RBP17.94■□□□□ 0.46
TROAP-213ENST00000550709 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
TROAP-213ENST00000550709 ARXQ96QS3 562 aa17.93■□□□□ 0.46
TROAP-213ENST00000550709 SGIP1Q9BQI5 828 aa17.93■□□□□ 0.46
TROAP-213ENST00000550709 BABAM1Q9NWV8 329 aa17.93■□□□□ 0.46
TROAP-213ENST00000550709 CASZ1Q86V15 1759 aa17.92■□□□□ 0.46
TROAP-213ENST00000550709 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
TROAP-213ENST00000550709 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
TROAP-213ENST00000550709 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
TROAP-213ENST00000550709 TAF1LQ8IZX4 1826 aa17.91■□□□□ 0.46
TROAP-213ENST00000550709 KRT24Q2M2I5 525 aa17.91■□□□□ 0.46
TROAP-213ENST00000550709 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
TROAP-213ENST00000550709 DLG5Q8TDM6 1919 aa17.91■□□□□ 0.46
TROAP-213ENST00000550709 SIPA1L3O60292 1781 aaPredicted RBP17.91■□□□□ 0.46
TROAP-213ENST00000550709 TJP1Q07157 1748 aa17.9■□□□□ 0.46
TROAP-213ENST00000550709 ZPR1O75312 459 aa17.9■□□□□ 0.46
TROAP-213ENST00000550709 EIF2S2P20042 333 aaKnown RBP17.9■□□□□ 0.46
TROAP-213ENST00000550709 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
TROAP-213ENST00000550709 GNAI1P63096 354 aa17.9■□□□□ 0.46
TROAP-213ENST00000550709 KLHL34Q8N239 644 aa17.9■□□□□ 0.46
TROAP-213ENST00000550709 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
TROAP-213ENST00000550709 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
TROAP-213ENST00000550709 VIRMAQ69YN4 1812 aaKnown RBP17.89■□□□□ 0.45
TROAP-213ENST00000550709 GYS1P13807 737 aa17.89■□□□□ 0.45
TROAP-213ENST00000550709 CCDC27Q2M243 656 aa17.89■□□□□ 0.45
TROAP-213ENST00000550709 NECTIN2Q92692 538 aa17.89■□□□□ 0.45
TROAP-213ENST00000550709 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
TROAP-213ENST00000550709 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
TROAP-213ENST00000550709 COL15A1P39059 1388 aa17.89■□□□□ 0.45
TROAP-213ENST00000550709 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
TROAP-213ENST00000550709 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
TROAP-213ENST00000550709 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
TROAP-213ENST00000550709 USPL1Q5W0Q7 1092 aa17.88■□□□□ 0.45
TROAP-213ENST00000550709 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
TROAP-213ENST00000550709 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
TROAP-213ENST00000550709 NBPF15Q8N660 670 aa17.88■□□□□ 0.45
TROAP-213ENST00000550709 USP42Q9H9J4 1324 aaKnown RBP17.88■□□□□ 0.45
TROAP-213ENST00000550709 UBR2Q8IWV8 1755 aa17.88■□□□□ 0.45
TROAP-213ENST00000550709 TUBGCP6Q96RT7 1819 aa17.87■□□□□ 0.45
TROAP-213ENST00000550709 A0A087WZG4 1122 aa17.87■□□□□ 0.45
TROAP-213ENST00000550709 MMP10P09238 476 aa17.87■□□□□ 0.45
TROAP-213ENST00000550709 FKBP8Q14318 412 aa17.87■□□□□ 0.45
TROAP-213ENST00000550709 NLGN1Q8N2Q7 840 aa17.87■□□□□ 0.45
TROAP-213ENST00000550709 FHDC1Q9C0D6 1143 aaPredicted RBP17.87■□□□□ 0.45
TROAP-213ENST00000550709 MYH14Q7Z406 1995 aaKnown RBP17.86■□□□□ 0.45
TROAP-213ENST00000550709 TSR2Q969E8 191 aaKnown RBP17.86■□□□□ 0.45
TROAP-213ENST00000550709 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
TROAP-213ENST00000550709 LRP5O75197 1615 aa17.86■□□□□ 0.45
TROAP-213ENST00000550709 COL5A3P25940 1745 aaPredicted RBP17.86■□□□□ 0.45
TROAP-213ENST00000550709 UBR3Q6ZT12 1888 aa17.86■□□□□ 0.45
TROAP-213ENST00000550709 ELL2O00472 640 aaPredicted RBP17.85■□□□□ 0.45
TROAP-213ENST00000550709 MYL6BP14649 208 aa17.85■□□□□ 0.45
TROAP-213ENST00000550709 DUSP27Q5VZP5 1158 aa17.85■□□□□ 0.45
TROAP-213ENST00000550709 NCBP3Q53F19 620 aaKnown RBP17.84■□□□□ 0.45
TROAP-213ENST00000550709 DZIP3Q86Y13 1208 aaKnown RBP17.84■□□□□ 0.45
TROAP-213ENST00000550709 CICQ96RK0 1608 aaPredicted RBP17.83■□□□□ 0.45
TROAP-213ENST00000550709 ANXA1P04083 346 aa17.83■□□□□ 0.44
TROAP-213ENST00000550709 BICDL1Q6ZP65 573 aa17.83■□□□□ 0.44
TROAP-213ENST00000550709 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
TROAP-213ENST00000550709 BCL2L12Q9HB09 334 aa17.83■□□□□ 0.44
TROAP-213ENST00000550709 QSER1Q2KHR3 1735 aa17.83■□□□□ 0.44
TROAP-213ENST00000550709 HDGFL1Q5TGJ6 251 aa17.82■□□□□ 0.44
TROAP-213ENST00000550709 C8orf58Q8NAV2 365 aa17.82■□□□□ 0.44
TROAP-213ENST00000550709 SYT17Q9BSW7 474 aa17.82■□□□□ 0.44
TROAP-213ENST00000550709 IL16Q14005 1332 aa17.81■□□□□ 0.44
TROAP-213ENST00000550709 CAMTA2O94983 1202 aa17.81■□□□□ 0.44
TROAP-213ENST00000550709 PROSER3Q2NL68 480 aa17.81■□□□□ 0.44
TROAP-213ENST00000550709 PARP3Q9Y6F1 533 aa17.81■□□□□ 0.44
TROAP-213ENST00000550709 KDM3BQ7LBC6 1761 aa17.81■□□□□ 0.44
TROAP-213ENST00000550709 DDR1Q08345 913 aa17.8■□□□□ 0.44
TROAP-213ENST00000550709 NFIXQ14938 502 aa17.8■□□□□ 0.44
TROAP-213ENST00000550709 PDIA6Q15084 440 aa17.8■□□□□ 0.44
TROAP-213ENST00000550709 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
TROAP-213ENST00000550709 HOXB7P09629 217 aa17.79■□□□□ 0.44
TROAP-213ENST00000550709 TM4SF1P30408 202 aa17.79■□□□□ 0.44
TROAP-213ENST00000550709 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
TROAP-213ENST00000550709 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
TROAP-213ENST00000550709 TSPYL6Q8N831 410 aa17.79■□□□□ 0.44
TROAP-213ENST00000550709 ERBB4Q15303 1308 aa17.78■□□□□ 0.44
TROAP-213ENST00000550709 NLGN2Q8NFZ4 835 aa17.78■□□□□ 0.44
TROAP-213ENST00000550709 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
TROAP-213ENST00000550709 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
TROAP-213ENST00000550709 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
TROAP-213ENST00000550709 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
TROAP-213ENST00000550709 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
TROAP-213ENST00000550709 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
TROAP-213ENST00000550709 HLFQ16534 295 aa17.76■□□□□ 0.43
TROAP-213ENST00000550709 XAGE3Q8WTP9 111 aa17.76■□□□□ 0.43
TROAP-213ENST00000550709 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
TROAP-213ENST00000550709 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
TROAP-213ENST00000550709 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
TROAP-213ENST00000550709 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
TROAP-213ENST00000550709 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
TROAP-213ENST00000550709 SERPINB2P05120 415 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms