RNA–Protein interactions for RNA: ENST00000549870.5

TUBA1B-205, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-205ENST00000549870 PLCG2P16885 1265 aa16.59■□□□□ 0.25
TUBA1B-205ENST00000549870 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
TUBA1B-205ENST00000549870 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
TUBA1B-205ENST00000549870 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
TUBA1B-205ENST00000549870 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
TUBA1B-205ENST00000549870 EYA1Q99502 592 aa16.58■□□□□ 0.24
TUBA1B-205ENST00000549870 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
TUBA1B-205ENST00000549870 COL24A1Q17RW2 1714 aa16.58■□□□□ 0.24
TUBA1B-205ENST00000549870 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.24
TUBA1B-205ENST00000549870 UTRNP46939 3433 aa16.57■□□□□ 0.24
TUBA1B-205ENST00000549870 TUBGCP6Q96RT7 1819 aa16.57■□□□□ 0.24
TUBA1B-205ENST00000549870 C2orf72A6NCS6 295 aa16.57■□□□□ 0.24
TUBA1B-205ENST00000549870 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
TUBA1B-205ENST00000549870 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
TUBA1B-205ENST00000549870 PIGBQ92521 554 aa16.57■□□□□ 0.24
TUBA1B-205ENST00000549870 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
TUBA1B-205ENST00000549870 DPYSL4O14531 572 aa16.56■□□□□ 0.24
TUBA1B-205ENST00000549870 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
TUBA1B-205ENST00000549870 MLLT3P42568 568 aaPredicted RBP16.55■□□□□ 0.24
TUBA1B-205ENST00000549870 PLPP6Q8IY26 295 aa16.55■□□□□ 0.24
TUBA1B-205ENST00000549870 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
TUBA1B-205ENST00000549870 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
TUBA1B-205ENST00000549870 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
TUBA1B-205ENST00000549870 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
TUBA1B-205ENST00000549870 PDIA6Q15084 440 aa16.54■□□□□ 0.24
TUBA1B-205ENST00000549870 CHD4Q14839 1912 aa16.54■□□□□ 0.24
TUBA1B-205ENST00000549870 SPDYE16A6NNV3 312 aaPredicted RBP16.53■□□□□ 0.24
TUBA1B-205ENST00000549870 G3V3G9 751 aa16.53■□□□□ 0.24
TUBA1B-205ENST00000549870 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.247e-15■■■■□ 22.7
TUBA1B-205ENST00000549870 AK7Q96M32 723 aa16.53■□□□□ 0.24
TUBA1B-205ENST00000549870 COLQQ9Y215 455 aaPredicted RBP16.53■□□□□ 0.24
TUBA1B-205ENST00000549870 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
TUBA1B-205ENST00000549870 TNNT2P45379 298 aaPredicted RBP16.52■□□□□ 0.24
TUBA1B-205ENST00000549870 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
TUBA1B-205ENST00000549870 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.24
TUBA1B-205ENST00000549870 CD2APQ9Y5K6 639 aa16.52■□□□□ 0.24
TUBA1B-205ENST00000549870 LOC102724428A0A0B4J2F2 783 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 ZMYND10O75800 440 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 PHKG2P15735 406 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 SIK1P57059 783 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 C1QTNF8P60827 252 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 DCBLD2Q96PD2 775 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
TUBA1B-205ENST00000549870 C5P01031 1676 aa16.5■□□□□ 0.23
TUBA1B-205ENST00000549870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.5■□□□□ 0.23
TUBA1B-205ENST00000549870 PHF14O94880 888 aa16.5■□□□□ 0.23
TUBA1B-205ENST00000549870 ASAP1Q9ULH1 1129 aa16.5■□□□□ 0.23
TUBA1B-205ENST00000549870 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
TUBA1B-205ENST00000549870 EIF4G2P78344 907 aaKnown RBP eCLIP16.49■□□□□ 0.23
TUBA1B-205ENST00000549870 TMEM92Q6UXU6 159 aa16.49■□□□□ 0.23
TUBA1B-205ENST00000549870 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
TUBA1B-205ENST00000549870 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
TUBA1B-205ENST00000549870 MAP2P11137 1827 aaKnown RBP16.48■□□□□ 0.23
TUBA1B-205ENST00000549870 PANK3Q9H999 370 aa16.48■□□□□ 0.23
TUBA1B-205ENST00000549870 ITGB4P16144 1822 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 POTEFA5A3E0 1075 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 SEC24BO95487 1268 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 SSFA2P28290 1259 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 ATP6V1AP38606 617 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 ITPK1Q13572 414 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 C4BP0C0L5 1744 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 ANKRD26Q9UPS8 1709 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 TAF1LQ8IZX4 1826 aa16.47■□□□□ 0.23
TUBA1B-205ENST00000549870 RBM26Q5T8P6 1007 aaKnown RBP16.46■□□□□ 0.23
TUBA1B-205ENST00000549870 SLC39A7Q92504 469 aa16.46■□□□□ 0.23
TUBA1B-205ENST00000549870 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
TUBA1B-205ENST00000549870 GNPATO15228 680 aa16.45■□□□□ 0.22
TUBA1B-205ENST00000549870 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
TUBA1B-205ENST00000549870 POTEHQ6S545 545 aa16.45■□□□□ 0.22
TUBA1B-205ENST00000549870 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
TUBA1B-205ENST00000549870 SLC24A3Q9HC58 644 aa16.44■□□□□ 0.22
TUBA1B-205ENST00000549870 PLEKHG2Q9H7P9 1386 aa16.43■□□□□ 0.22
TUBA1B-205ENST00000549870 ERVV-2B6SEH9 535 aa16.43■□□□□ 0.22
TUBA1B-205ENST00000549870 HSP90AB1P08238 724 aaKnown RBP16.43■□□□□ 0.22
TUBA1B-205ENST00000549870 C7P10643 843 aa16.43■□□□□ 0.22
TUBA1B-205ENST00000549870 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
TUBA1B-205ENST00000549870 DCAF5Q96JK2 942 aa16.42■□□□□ 0.22
TUBA1B-205ENST00000549870 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
TUBA1B-205ENST00000549870 TMEM132AQ24JP5 1023 aa16.41■□□□□ 0.22
TUBA1B-205ENST00000549870 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
TUBA1B-205ENST00000549870 MORC1Q86VD1 984 aa16.41■□□□□ 0.22
TUBA1B-205ENST00000549870 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
TUBA1B-205ENST00000549870 UBR3Q6ZT12 1888 aa16.41■□□□□ 0.22
TUBA1B-205ENST00000549870 BRPF1P55201 1214 aaPredicted RBP16.4■□□□□ 0.22
TUBA1B-205ENST00000549870 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
TUBA1B-205ENST00000549870 ZNF530Q6P9A1 599 aaPredicted RBP16.4■□□□□ 0.22
TUBA1B-205ENST00000549870 RTCBQ9Y3I0 505 aaKnown RBP16.4■□□□□ 0.22
TUBA1B-205ENST00000549870 CABP4P57796 275 aa16.39■□□□□ 0.21
TUBA1B-205ENST00000549870 WWC3Q9ULE0 1092 aa16.39■□□□□ 0.21
TUBA1B-205ENST00000549870 MMP10P09238 476 aa16.38■□□□□ 0.21
TUBA1B-205ENST00000549870 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
TUBA1B-205ENST00000549870 MTHFSP49914 203 aa16.38■□□□□ 0.21
TUBA1B-205ENST00000549870 RC3H1Q5TC82 1133 aaKnown RBP16.38■□□□□ 0.21
TUBA1B-205ENST00000549870 AEBP1Q8IUX7 1158 aa16.38■□□□□ 0.21
TUBA1B-205ENST00000549870 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
TUBA1B-205ENST00000549870 KDRP35968 1356 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms