RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 RNF123Q5XPI4 1314 aa9.39□□□□□ -0.91
FGD6-205ENST00000549499 AMER1Q5JTC6 1135 aaPredicted RBP9.39□□□□□ -0.91
FGD6-205ENST00000549499 FAM9BQ8IZU0 186 aa9.39□□□□□ -0.91
FGD6-205ENST00000549499 SETDB2Q96T68 719 aa9.39□□□□□ -0.91
FGD6-205ENST00000549499 PHRF1Q9P1Y6 1649 aaKnown RBP9.38□□□□□ -0.91
FGD6-205ENST00000549499 SLC52A2Q9HAB3 445 aa9.38□□□□□ -0.91
FGD6-205ENST00000549499 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
FGD6-205ENST00000549499 INTS5Q6P9B9 1019 aaKnown RBP9.38□□□□□ -0.91
FGD6-205ENST00000549499 LRP5O75197 1615 aa9.38□□□□□ -0.91
FGD6-205ENST00000549499 NSD2O96028 1365 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 RPS6KA4O75676 772 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 ZNF790Q6PG37 636 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 SLC16A10Q8TF71 515 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 H0YIN7 160 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 ABCA3Q99758 1704 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 GNAT3A8MTJ3 354 aa9.37□□□□□ -0.91
FGD6-205ENST00000549499 STARD3NLO95772 234 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 CCDC184Q52MB2 194 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 PRAMEF18Q5VWM3 479 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 CNBD1Q8NA66 436 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 PROSER3Q2NL68 480 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 NRAPQ86VF7 1730 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 TRIOBPQ9H2D6 2365 aa9.36□□□□□ -0.91
FGD6-205ENST00000549499 TRPM1Q7Z4N2 1603 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 NFAT5O94916 1531 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 USP31Q70CQ4 1352 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 RAD17O75943 681 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 CYP19A1P11511 503 aaPredicted RBP9.35□□□□□ -0.91
FGD6-205ENST00000549499 PRELPP51888 382 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 RIPK4P57078 832 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 COL6A3P12111 3177 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 WTIPA6NIX2 430 aaPredicted RBP9.35□□□□□ -0.91
FGD6-205ENST00000549499 SSFA2P28290 1259 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 TSPYL4Q9UJ04 414 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 PARD3Q8TEW0 1356 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 NINLQ9Y2I6 1382 aa9.35□□□□□ -0.91
FGD6-205ENST00000549499 EYSQ5T1H1 3165 aa9.34□□□□□ -0.91
FGD6-205ENST00000549499 MYOM1P52179 1685 aa9.34□□□□□ -0.91
FGD6-205ENST00000549499 ABT1Q9ULW3 272 aaKnown RBP9.34□□□□□ -0.91
FGD6-205ENST00000549499 LAMC1P11047 1609 aa9.34□□□□□ -0.91
FGD6-205ENST00000549499 PPP2R1AP30153 589 aa9.34□□□□□ -0.91
FGD6-205ENST00000549499 TTLL6Q8N841 843 aa9.34□□□□□ -0.91
FGD6-205ENST00000549499 KNDC1Q76NI1 1749 aa9.34□□□□□ -0.91
FGD6-205ENST00000549499 PLIN1O60240 522 aa9.34□□□□□ -0.92
FGD6-205ENST00000549499 AMOTQ4VCS5 1084 aa9.34□□□□□ -0.92
FGD6-205ENST00000549499 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.92
FGD6-205ENST00000549499 BCL9O00512 1426 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 ADGRB2O60241 1585 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 NWD2Q9ULI1 1742 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 SHTN1A0MZ66 631 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 KIF3CO14782 793 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 BCL2L12Q9HB09 334 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 ZBTB12Q9Y330 459 aaPredicted RBP9.33□□□□□ -0.92
FGD6-205ENST00000549499 LRRC37A3O60309 1634 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 SNAP23O00161 211 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 FZD1Q9UP38 647 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 LTN1O94822 1766 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 CUL9Q8IWT3 2517 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 TRAF5O00463 557 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 FAM89AQ96GI7 184 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 CD2APQ9Y5K6 639 aa9.33□□□□□ -0.92
FGD6-205ENST00000549499 POLRMTO00411 1230 aaKnown RBP9.32□□□□□ -0.92
FGD6-205ENST00000549499 HSP90AB1P08238 724 aaKnown RBP9.32□□□□□ -0.92
FGD6-205ENST00000549499 KCNA3P22001 575 aa9.32□□□□□ -0.92
FGD6-205ENST00000549499 BTAF1O14981 1849 aa9.32□□□□□ -0.92
FGD6-205ENST00000549499 PRR5LQ6MZQ0 368 aa9.32□□□□□ -0.92
FGD6-205ENST00000549499 PRPF40BQ6NWY9 871 aaKnown RBP9.32□□□□□ -0.92
FGD6-205ENST00000549499 C3orf67Q6ZVT6 689 aa9.32□□□□□ -0.92
FGD6-205ENST00000549499 FLAD1Q8NFF5 587 aa9.32□□□□□ -0.92
FGD6-205ENST00000549499 TSR2Q969E8 191 aaKnown RBP9.32□□□□□ -0.92
FGD6-205ENST00000549499 HSPA6P17066 643 aa9.32□□□□□ -0.92
FGD6-205ENST00000549499 DOK7Q18PE1 504 aa9.32□□□□□ -0.92
FGD6-205ENST00000549499 THSD7AQ9UPZ6 1657 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 ERVV-2B6SEH9 535 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 FMNL2Q96PY5 1086 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 BCL2L13Q9BXK5 485 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 NSFL1CQ9UNZ2 370 aaKnown RBP9.31□□□□□ -0.92
FGD6-205ENST00000549499 ITSN1Q15811 1721 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 MYO9BQ13459 2157 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
FGD6-205ENST00000549499 KDM6AO15550 1401 aaPredicted RBP9.31□□□□□ -0.92
FGD6-205ENST00000549499 NBPF26B4DH59 902 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
FGD6-205ENST00000549499 WDR43Q15061 677 aaKnown RBP eCLIP9.31□□□□□ -0.92
FGD6-205ENST00000549499 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
FGD6-205ENST00000549499 NBPF15Q8N660 670 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 PCDH10Q9P2E7 1040 aa9.31□□□□□ -0.92
FGD6-205ENST00000549499 G3V3G9 751 aa9.3□□□□□ -0.92
FGD6-205ENST00000549499 APAF1O14727 1248 aa9.3□□□□□ -0.92
FGD6-205ENST00000549499 DCAF8Q5TAQ9 597 aa9.3□□□□□ -0.92
FGD6-205ENST00000549499 C6orf229H3BNL8 230 aa9.3□□□□□ -0.92
FGD6-205ENST00000549499 LMO7Q8WWI1 1683 aa9.3□□□□□ -0.92
FGD6-205ENST00000549499 KCNQ5Q9NR82 932 aa9.3□□□□□ -0.92
FGD6-205ENST00000549499 PARP4Q9UKK3 1724 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 220.7 ms