RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 WDR44Q5JSH3 913 aa8.69□□□□□ -1.02
PRDM4-204ENST00000549416 SH3PXD2AQ5TCZ1 1133 aa8.69□□□□□ -1.02
PRDM4-204ENST00000549416 POTEAQ6S8J7 498 aa8.69□□□□□ -1.02
PRDM4-204ENST00000549416 PARP3Q9Y6F1 533 aa8.69□□□□□ -1.02
PRDM4-204ENST00000549416 EML1O00423 815 aa8.68□□□□□ -1.02
PRDM4-204ENST00000549416 PPP1R12BO60237 982 aaPredicted RBP8.68□□□□□ -1.02
PRDM4-204ENST00000549416 PLA2G4AP47712 749 aa8.68□□□□□ -1.02
PRDM4-204ENST00000549416 PTSQ03393 145 aa8.68□□□□□ -1.02
PRDM4-204ENST00000549416 C2orf49Q9BVC5 232 aaPredicted RBP8.68□□□□□ -1.02
PRDM4-204ENST00000549416 CXXC1Q9P0U4 656 aaPredicted RBP8.68□□□□□ -1.02
PRDM4-204ENST00000549416 SLC35F4A4IF30 521 aa8.67□□□□□ -1.02
PRDM4-204ENST00000549416 ATP2B4P23634 1241 aa8.67□□□□□ -1.02
PRDM4-204ENST00000549416 SSFA2P28290 1259 aa8.67□□□□□ -1.02
PRDM4-204ENST00000549416 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
PRDM4-204ENST00000549416 ZNF787Q6DD87 383 aa8.67□□□□□ -1.02
PRDM4-204ENST00000549416 PHLDB3Q6NSJ2 640 aa8.67□□□□□ -1.02
PRDM4-204ENST00000549416 STAG2Q8N3U4 1231 aa8.67□□□□□ -1.02
PRDM4-204ENST00000549416 CHMP7Q8WUX9 453 aaPredicted RBP8.67□□□□□ -1.02
PRDM4-204ENST00000549416 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
PRDM4-204ENST00000549416 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
PRDM4-204ENST00000549416 TIMMDC1Q9NPL8 285 aa8.66□□□□□ -1.02
PRDM4-204ENST00000549416 FOXO3O43524 673 aa8.65□□□□□ -1.02
PRDM4-204ENST00000549416 SCNN1AP37088 669 aa8.65□□□□□ -1.02
PRDM4-204ENST00000549416 TXLNAP40222 546 aa8.65□□□□□ -1.02
PRDM4-204ENST00000549416 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
PRDM4-204ENST00000549416 PDE4CQ08493 712 aa8.64□□□□□ -1.03
PRDM4-204ENST00000549416 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
PRDM4-204ENST00000549416 TRAIPQ9BWF2 469 aa8.64□□□□□ -1.03
PRDM4-204ENST00000549416 ZNF232Q9UNY5 417 aa8.64□□□□□ -1.03
PRDM4-204ENST00000549416 HCN4Q9Y3Q4 1203 aa8.64□□□□□ -1.03
PRDM4-204ENST00000549416 DYRK1BQ9Y463 629 aa8.64□□□□□ -1.03
PRDM4-204ENST00000549416 CCDC155Q8N6L0 562 aa8.63□□□□□ -1.03
PRDM4-204ENST00000549416 C1orf216Q8TAB5 229 aa8.63□□□□□ -1.03
PRDM4-204ENST00000549416 C7orf43Q8WVR3 580 aa8.63□□□□□ -1.03
PRDM4-204ENST00000549416 AIDAQ96BJ3 306 aa8.63□□□□□ -1.03
PRDM4-204ENST00000549416 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
PRDM4-204ENST00000549416 ATP4AP20648 1035 aa8.62□□□□□ -1.03
PRDM4-204ENST00000549416 MSX1P28360 303 aa8.62□□□□□ -1.03
PRDM4-204ENST00000549416 GAS2L1Q99501 681 aaPredicted RBP8.62□□□□□ -1.03
PRDM4-204ENST00000549416 ZDHHC3Q9NYG2 299 aa8.62□□□□□ -1.03
PRDM4-204ENST00000549416 CHMP3Q9Y3E7 222 aa8.62□□□□□ -1.03
PRDM4-204ENST00000549416 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
PRDM4-204ENST00000549416 KLRG1Q96E93 195 aa8.61□□□□□ -1.03
PRDM4-204ENST00000549416 MKNK1Q9BUB5 465 aa8.61□□□□□ -1.03
PRDM4-204ENST00000549416 GPAMQ9HCL2 828 aa8.61□□□□□ -1.03
PRDM4-204ENST00000549416 PPFIA3O75145 1194 aa8.6□□□□□ -1.03
PRDM4-204ENST00000549416 F11P03951 625 aa8.6□□□□□ -1.03
PRDM4-204ENST00000549416 NBPF1Q3BBV0 1214 aa8.6□□□□□ -1.03
PRDM4-204ENST00000549416 ALDH16A1Q8IZ83 802 aa8.6□□□□□ -1.03
PRDM4-204ENST00000549416 PHACTR1Q9C0D0 580 aa8.6□□□□□ -1.03
PRDM4-204ENST00000549416 QTRT2Q9H974 415 aaKnown RBP8.6□□□□□ -1.03
PRDM4-204ENST00000549416 CUEDC1Q9NWM3 386 aaPredicted RBP8.6□□□□□ -1.03
PRDM4-204ENST00000549416 THBS1P07996 1170 aa8.59□□□□□ -1.03
PRDM4-204ENST00000549416 COL26A1Q96A83 441 aa8.59□□□□□ -1.03
PRDM4-204ENST00000549416 NGLY1Q96IV0 654 aa8.59□□□□□ -1.03
PRDM4-204ENST00000549416 ZIC5Q96T25 663 aa8.59□□□□□ -1.03
PRDM4-204ENST00000549416 PDIA4P13667 645 aaKnown RBP8.58□□□□□ -1.04
PRDM4-204ENST00000549416 ITGA6P23229 1130 aa8.58□□□□□ -1.04
PRDM4-204ENST00000549416 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
PRDM4-204ENST00000549416 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
PRDM4-204ENST00000549416 RUBCNLQ9H714 662 aa8.58□□□□□ -1.04
PRDM4-204ENST00000549416 NXF1Q9UBU9 619 aaKnown RBP8.58□□□□□ -1.04
PRDM4-204ENST00000549416 SEPT3Q9UH03 358 aa8.58□□□□□ -1.04
PRDM4-204ENST00000549416 PTCD1O75127 700 aaKnown RBP8.57□□□□□ -1.04
PRDM4-204ENST00000549416 BRD1O95696 1058 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
PRDM4-204ENST00000549416 VEGFBP49765 207 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 NAA30Q147X3 362 aaPredicted RBP8.57□□□□□ -1.04
PRDM4-204ENST00000549416 DBN1Q16643 649 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 RIPOR1Q6ZS17 1223 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 CRISPLD1Q9H336 500 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 LRFN2Q9ULH4 789 aa8.57□□□□□ -1.04
PRDM4-204ENST00000549416 RTN1Q16799 776 aa8.56□□□□□ -1.04
PRDM4-204ENST00000549416 COX20Q5RI15 118 aa8.56□□□□□ -1.04
PRDM4-204ENST00000549416 MYO19Q96H55 970 aa8.56□□□□□ -1.04
PRDM4-204ENST00000549416 A0A1W2PNR3 127 aa8.55□□□□□ -1.04
PRDM4-204ENST00000549416 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
PRDM4-204ENST00000549416 TXNDC2Q86VQ3 553 aa8.55□□□□□ -1.04
PRDM4-204ENST00000549416 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
PRDM4-204ENST00000549416 ARSJQ5FYB0 599 aaPredicted RBP8.54□□□□□ -1.04
PRDM4-204ENST00000549416 C16orf46Q6P387 395 aa8.54□□□□□ -1.04
PRDM4-204ENST00000549416 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
PRDM4-204ENST00000549416 TRIM22Q8IYM9 498 aa8.54□□□□□ -1.04
PRDM4-204ENST00000549416 ZNF837Q96EG3 531 aaPredicted RBP8.54□□□□□ -1.04
PRDM4-204ENST00000549416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.54□□□□□ -1.04
PRDM4-204ENST00000549416 KLK14Q9P0G3 267 aa8.54□□□□□ -1.04
PRDM4-204ENST00000549416 H3BM21 787 aa8.53□□□□□ -1.04
PRDM4-204ENST00000549416 TERTO14746 1132 aaKnown RBP8.53□□□□□ -1.04
PRDM4-204ENST00000549416 ARID4AP29374 1257 aaPredicted RBP8.53□□□□□ -1.04
PRDM4-204ENST00000549416 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
PRDM4-204ENST00000549416 PGBD3Q8N328 593 aa8.53□□□□□ -1.04
PRDM4-204ENST00000549416 ZNF280CQ8ND82 737 aa8.53□□□□□ -1.04
PRDM4-204ENST00000549416 NANOS1Q8WY41 292 aaKnown RBP8.53□□□□□ -1.04
PRDM4-204ENST00000549416 HSH2DQ96JZ2 352 aa8.53□□□□□ -1.04
PRDM4-204ENST00000549416 NUCKS1Q9H1E3 243 aaKnown RBP8.53□□□□□ -1.04
PRDM4-204ENST00000549416 BCS1LQ9Y276 419 aa8.53□□□□□ -1.04
PRDM4-204ENST00000549416 GPC6Q9Y625 555 aaPredicted RBP8.53□□□□□ -1.04
PRDM4-204ENST00000549416 H7C1W4 665 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms