RNA–Protein interactions for RNA: ENST00000549209.5

SMARCC2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-206ENST00000549209 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
SMARCC2-206ENST00000549209 MYH14Q7Z406 1995 aaKnown RBP11.09□□□□□ -0.63
SMARCC2-206ENST00000549209 HEG1Q9ULI3 1381 aa11.09□□□□□ -0.63
SMARCC2-206ENST00000549209 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
SMARCC2-206ENST00000549209 CCDC87Q9NVE4 849 aa11.09□□□□□ -0.63
SMARCC2-206ENST00000549209 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
SMARCC2-206ENST00000549209 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
SMARCC2-206ENST00000549209 BTBD11A6QL63 1104 aa11.08□□□□□ -0.64
SMARCC2-206ENST00000549209 GYS1P13807 737 aa11.08□□□□□ -0.64
SMARCC2-206ENST00000549209 TMPOP42166 694 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-206ENST00000549209 TAF7Q15545 349 aaPredicted RBP11.08□□□□□ -0.64
SMARCC2-206ENST00000549209 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
SMARCC2-206ENST00000549209 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-206ENST00000549209 GOLGB1Q14789 3259 aaKnown RBP11.08□□□□□ -0.64
SMARCC2-206ENST00000549209 POLD1P28340 1107 aa11.07□□□□□ -0.64
SMARCC2-206ENST00000549209 RTF1Q92541 710 aaKnown RBP11.07□□□□□ -0.64
SMARCC2-206ENST00000549209 FMNL2Q96PY5 1086 aa11.07□□□□□ -0.64
SMARCC2-206ENST00000549209 PNNQ9H307 717 aaKnown RBP11.07□□□□□ -0.64
SMARCC2-206ENST00000549209 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
SMARCC2-206ENST00000549209 ZBTB1Q9Y2K1 713 aa11.07□□□□□ -0.64
SMARCC2-206ENST00000549209 PRAMEF22A3QJZ6 481 aa11.06□□□□□ -0.64
SMARCC2-206ENST00000549209 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
SMARCC2-206ENST00000549209 TTC5Q8N0Z6 440 aa11.06□□□□□ -0.64
SMARCC2-206ENST00000549209 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
SMARCC2-206ENST00000549209 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
SMARCC2-206ENST00000549209 USP42Q9H9J4 1324 aaKnown RBP11.06□□□□□ -0.64
SMARCC2-206ENST00000549209 STARD3NLO95772 234 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 RIPK4P57078 832 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 NLGN2Q8NFZ4 835 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 BCL2L12Q9HB09 334 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 SRP68Q9UHB9 627 aaKnown RBP11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
SMARCC2-206ENST00000549209 A1BGP04217 495 aa11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 MMP10P09238 476 aa11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 TM4SF1P30408 202 aa11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 RFC4P35249 363 aa11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 FKBP8Q14318 412 aa11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 NLGN1Q8N2Q7 840 aa11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 PNISRQ8TF01 805 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-206ENST00000549209 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 SNRPA1P09661 255 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 DDR1Q08345 913 aa11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 NARFQ9UHQ1 456 aa11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 RRP7AQ9Y3A4 280 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 COL15A1P39059 1388 aa11.03□□□□□ -0.64
SMARCC2-206ENST00000549209 C4AP0C0L4 1744 aa11.02□□□□□ -0.65
SMARCC2-206ENST00000549209 GIGYF1O75420 1035 aaPredicted RBP11.02□□□□□ -0.65
SMARCC2-206ENST00000549209 NEFMP07197 916 aa11.02□□□□□ -0.65
SMARCC2-206ENST00000549209 IL6STP40189 918 aaPredicted RBP11.02□□□□□ -0.65
SMARCC2-206ENST00000549209 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
SMARCC2-206ENST00000549209 CHL1O00533 1208 aa11.01□□□□□ -0.65
SMARCC2-206ENST00000549209 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
SMARCC2-206ENST00000549209 USPL1Q5W0Q7 1092 aa11.01□□□□□ -0.65
SMARCC2-206ENST00000549209 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
SMARCC2-206ENST00000549209 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
SMARCC2-206ENST00000549209 POLRMTO00411 1230 aaKnown RBP11□□□□□ -0.65
SMARCC2-206ENST00000549209 APAF1O14727 1248 aa11□□□□□ -0.65
SMARCC2-206ENST00000549209 CAMTA2O94983 1202 aa11□□□□□ -0.65
SMARCC2-206ENST00000549209 ZNF853P0CG23 659 aa11□□□□□ -0.65
SMARCC2-206ENST00000549209 NFIXQ14938 502 aa11□□□□□ -0.65
SMARCC2-206ENST00000549209 KDM3BQ7LBC6 1761 aa11□□□□□ -0.65
SMARCC2-206ENST00000549209 YBX3P16989 372 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCC2-206ENST00000549209 PIP4K2AP48426 406 aaPredicted RBP10.99□□□□□ -0.65
SMARCC2-206ENST00000549209 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
SMARCC2-206ENST00000549209 NEUROD2Q15784 382 aa10.99□□□□□ -0.65
SMARCC2-206ENST00000549209 LRP10Q7Z4F1 713 aa10.99□□□□□ -0.65
SMARCC2-206ENST00000549209 A0A087WZG4 1122 aa10.98□□□□□ -0.65
SMARCC2-206ENST00000549209 ANP32CO43423 234 aa10.98□□□□□ -0.65
SMARCC2-206ENST00000549209 ZPR1O75312 459 aa10.98□□□□□ -0.65
SMARCC2-206ENST00000549209 KCNA3P22001 575 aa10.98□□□□□ -0.65
SMARCC2-206ENST00000549209 TBC1D2BQ9UPU7 963 aa10.98□□□□□ -0.65
SMARCC2-206ENST00000549209 PXDNLA1KZ92 1463 aa10.98□□□□□ -0.65
SMARCC2-206ENST00000549209 RGL2O15211 777 aa10.97□□□□□ -0.65
SMARCC2-206ENST00000549209 PDIA6Q15084 440 aa10.97□□□□□ -0.65
SMARCC2-206ENST00000549209 MRS2Q9HD23 443 aa10.97□□□□□ -0.65
SMARCC2-206ENST00000549209 TSPYL4Q9UJ04 414 aa10.97□□□□□ -0.65
SMARCC2-206ENST00000549209 KIAA1551Q9HCM1 1747 aa10.96□□□□□ -0.65
SMARCC2-206ENST00000549209 TGFB2P61812 414 aa10.96□□□□□ -0.65
SMARCC2-206ENST00000549209 KRT24Q2M2I5 525 aa10.96□□□□□ -0.65
SMARCC2-206ENST00000549209 TBC1D9BQ66K14 1250 aa10.96□□□□□ -0.65
SMARCC2-206ENST00000549209 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
SMARCC2-206ENST00000549209 CFAP44Q96MT7 982 aa10.96□□□□□ -0.65
SMARCC2-206ENST00000549209 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
SMARCC2-206ENST00000549209 KIF13BQ9NQT8 1826 aa10.95□□□□□ -0.66
SMARCC2-206ENST00000549209 CCDC27Q2M243 656 aa10.95□□□□□ -0.66
SMARCC2-206ENST00000549209 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
SMARCC2-206ENST00000549209 A0A0G2JLW4 131 aa10.94□□□□□ -0.66
SMARCC2-206ENST00000549209 SERPINB2P05120 415 aa10.94□□□□□ -0.66
SMARCC2-206ENST00000549209 DPEP1P16444 411 aa10.94□□□□□ -0.66
SMARCC2-206ENST00000549209 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
SMARCC2-206ENST00000549209 CLEC4GQ6UXB4 293 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms