RNA–Protein interactions for RNA: ENST00000548965.1

TMEM106C-210, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-210ENST00000548965 RFC4P35249 363 aa11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 TRAPPC3LQ5T215 181 aa11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 ZBTB1Q9Y2K1 713 aa11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 CHD4Q14839 1912 aa11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 BRCA1P38398 1863 aaKnown RBP11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 SOS1Q07889 1333 aaPredicted RBP11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 USP42Q9H9J4 1324 aaKnown RBP11.34□□□□□ -0.59
TMEM106C-210ENST00000548965 STARD3NLO95772 234 aa11.33□□□□□ -0.6
TMEM106C-210ENST00000548965 TMPOP42166 694 aaKnown RBP11.33□□□□□ -0.6
TMEM106C-210ENST00000548965 RIPK4P57078 832 aa11.33□□□□□ -0.6
TMEM106C-210ENST00000548965 LMOD3Q0VAK6 560 aa11.33□□□□□ -0.6
TMEM106C-210ENST00000548965 CCDC184Q52MB2 194 aa11.33□□□□□ -0.6
TMEM106C-210ENST00000548965 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
TMEM106C-210ENST00000548965 RUNDC1Q96C34 613 aa11.33□□□□□ -0.6
TMEM106C-210ENST00000548965 NRXN2Q9P2S2 1712 aa11.32□□□□□ -0.6
TMEM106C-210ENST00000548965 TAF7Q15545 349 aaPredicted RBP11.32□□□□□ -0.6
TMEM106C-210ENST00000548965 NEUROD2Q15784 382 aa11.32□□□□□ -0.6
TMEM106C-210ENST00000548965 SYT17Q9BSW7 474 aa11.32□□□□□ -0.6
TMEM106C-210ENST00000548965 MIS18AQ9NYP9 233 aa11.32□□□□□ -0.6
TMEM106C-210ENST00000548965 SRP68Q9UHB9 627 aaKnown RBP11.32□□□□□ -0.6
TMEM106C-210ENST00000548965 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
TMEM106C-210ENST00000548965 MMP10P09238 476 aa11.31□□□□□ -0.6
TMEM106C-210ENST00000548965 GYS1P13807 737 aa11.31□□□□□ -0.6
TMEM106C-210ENST00000548965 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
TMEM106C-210ENST00000548965 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
TMEM106C-210ENST00000548965 ZNF330Q9Y3S2 320 aaPredicted RBP11.31□□□□□ -0.6
TMEM106C-210ENST00000548965 CACNA1SQ13698 1873 aa11.3□□□□□ -0.6
TMEM106C-210ENST00000548965 C10orf71Q711Q0 1435 aa11.3□□□□□ -0.6
TMEM106C-210ENST00000548965 PRAMEF22A3QJZ6 481 aa11.3□□□□□ -0.6
TMEM106C-210ENST00000548965 NLGN2Q8NFZ4 835 aa11.3□□□□□ -0.6
TMEM106C-210ENST00000548965 PNISRQ8TF01 805 aaKnown RBP11.3□□□□□ -0.6
TMEM106C-210ENST00000548965 TEX13AQ9BXU3 409 aaPredicted RBP11.3□□□□□ -0.6
TMEM106C-210ENST00000548965 NUP98P52948 1817 aa11.3□□□□□ -0.6
TMEM106C-210ENST00000548965 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
TMEM106C-210ENST00000548965 ZPR1O75312 459 aa11.29□□□□□ -0.6
TMEM106C-210ENST00000548965 SNRPA1P09661 255 aaKnown RBP11.29□□□□□ -0.6
TMEM106C-210ENST00000548965 PIP4K2AP48426 406 aaPredicted RBP11.29□□□□□ -0.6
TMEM106C-210ENST00000548965 TSPYL4Q9UJ04 414 aa11.29□□□□□ -0.6
TMEM106C-210ENST00000548965 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
TMEM106C-210ENST00000548965 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
TMEM106C-210ENST00000548965 PXDNLA1KZ92 1463 aa11.28□□□□□ -0.6
TMEM106C-210ENST00000548965 DCAF8L1A6NGE4 600 aa11.28□□□□□ -0.6
TMEM106C-210ENST00000548965 A1BGP04217 495 aa11.28□□□□□ -0.6
TMEM106C-210ENST00000548965 FKBP8Q14318 412 aa11.28□□□□□ -0.6
TMEM106C-210ENST00000548965 USPL1Q5W0Q7 1092 aa11.28□□□□□ -0.6
TMEM106C-210ENST00000548965 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
TMEM106C-210ENST00000548965 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
TMEM106C-210ENST00000548965 APAF1O14727 1248 aa11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 IL6STP40189 918 aaPredicted RBP11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 NPM2Q86SE8 214 aaKnown RBP11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 USP16Q9Y5T5 823 aa11.27□□□□□ -0.61
TMEM106C-210ENST00000548965 EIF4A1P60842 406 aaKnown RBP11.26□□□□□ -0.61
TMEM106C-210ENST00000548965 DDR1Q08345 913 aa11.26□□□□□ -0.61
TMEM106C-210ENST00000548965 LAS1LQ9Y4W2 734 aaKnown RBP11.26□□□□□ -0.61
TMEM106C-210ENST00000548965 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
TMEM106C-210ENST00000548965 PARP3Q9Y6F1 533 aa11.26□□□□□ -0.61
TMEM106C-210ENST00000548965 A0A087WZG4 1122 aa11.25□□□□□ -0.61
TMEM106C-210ENST00000548965 SENP3-EIF4A1A0A087X0R7 540 aa11.25□□□□□ -0.61
TMEM106C-210ENST00000548965 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
TMEM106C-210ENST00000548965 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
TMEM106C-210ENST00000548965 ARFGEF2Q9Y6D5 1785 aa11.25□□□□□ -0.61
TMEM106C-210ENST00000548965 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
TMEM106C-210ENST00000548965 NFIXQ14938 502 aa11.24□□□□□ -0.61
TMEM106C-210ENST00000548965 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
TMEM106C-210ENST00000548965 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
TMEM106C-210ENST00000548965 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
TMEM106C-210ENST00000548965 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
TMEM106C-210ENST00000548965 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
TMEM106C-210ENST00000548965 POLRMTO00411 1230 aaKnown RBP11.23□□□□□ -0.61
TMEM106C-210ENST00000548965 GPR162Q16538 588 aa11.23□□□□□ -0.61
TMEM106C-210ENST00000548965 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
TMEM106C-210ENST00000548965 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
TMEM106C-210ENST00000548965 CARMIL3Q8ND23 1372 aa11.23□□□□□ -0.61
TMEM106C-210ENST00000548965 TNRC6CQ9HCJ0 1690 aaKnown RBP11.23□□□□□ -0.61
TMEM106C-210ENST00000548965 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
TMEM106C-210ENST00000548965 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
TMEM106C-210ENST00000548965 CHL1O00533 1208 aa11.21□□□□□ -0.61
TMEM106C-210ENST00000548965 MYL6BP14649 208 aa11.21□□□□□ -0.61
TMEM106C-210ENST00000548965 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.612e-7■■■□□ 17.1
TMEM106C-210ENST00000548965 TM4SF1P30408 202 aa11.21□□□□□ -0.61
TMEM106C-210ENST00000548965 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.61
TMEM106C-210ENST00000548965 TBC1D9BQ66K14 1250 aa11.21□□□□□ -0.61
TMEM106C-210ENST00000548965 NGEFQ8N5V2 710 aa11.21□□□□□ -0.61
TMEM106C-210ENST00000548965 ZNF652Q9Y2D9 606 aa11.21□□□□□ -0.61
TMEM106C-210ENST00000548965 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
TMEM106C-210ENST00000548965 EIF2S2P20042 333 aaKnown RBP11.2□□□□□ -0.62
TMEM106C-210ENST00000548965 FAM9BQ8IZU0 186 aa11.2□□□□□ -0.62
TMEM106C-210ENST00000548965 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
TMEM106C-210ENST00000548965 CFAP44Q96MT7 982 aa11.2□□□□□ -0.62
TMEM106C-210ENST00000548965 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
TMEM106C-210ENST00000548965 IFT57Q9NWB7 429 aa11.2□□□□□ -0.62
TMEM106C-210ENST00000548965 LAMB2P55268 1798 aa11.19□□□□□ -0.62
TMEM106C-210ENST00000548965 SERPINB2P05120 415 aa11.19□□□□□ -0.62
TMEM106C-210ENST00000548965 KIF6Q6ZMV9 814 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms