RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 A6NJY4 79 aa9.17□□□□□ -0.94
CCDC38-206ENST00000548771 USP17L5A8MUK1 530 aa9.17□□□□□ -0.94
CCDC38-206ENST00000548771 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
CCDC38-206ENST00000548771 TBC1D9Q6ZT07 1266 aa9.17□□□□□ -0.94
CCDC38-206ENST00000548771 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
CCDC38-206ENST00000548771 SUV39H2Q9H5I1 410 aa9.17□□□□□ -0.94
CCDC38-206ENST00000548771 RRAGCQ9HB90 399 aa9.17□□□□□ -0.94
CCDC38-206ENST00000548771 LRRC4BQ9NT99 713 aa9.17□□□□□ -0.94
CCDC38-206ENST00000548771 NSFL1CQ9UNZ2 370 aaKnown RBP9.17□□□□□ -0.94
CCDC38-206ENST00000548771 GTF2IP78347 998 aa9.16□□□□□ -0.94
CCDC38-206ENST00000548771 RUBCNLQ9H714 662 aa9.16□□□□□ -0.94
CCDC38-206ENST00000548771 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
CCDC38-206ENST00000548771 SERTAD1Q9UHV2 236 aa9.16□□□□□ -0.94
CCDC38-206ENST00000548771 ATP4AP20648 1035 aa9.15□□□□□ -0.94
CCDC38-206ENST00000548771 EPHA4P54764 986 aa9.15□□□□□ -0.94
CCDC38-206ENST00000548771 DEPDC4Q8N2C3 294 aa9.15□□□□□ -0.94
CCDC38-206ENST00000548771 NIFKQ9BYG3 293 aaKnown RBP9.15□□□□□ -0.94
CCDC38-206ENST00000548771 MKL2Q9ULH7 1088 aa9.15□□□□□ -0.94
CCDC38-206ENST00000548771 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
CCDC38-206ENST00000548771 GRIN2CQ14957 1233 aa9.14□□□□□ -0.95
CCDC38-206ENST00000548771 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCDC38-206ENST00000548771 C1orf216Q8TAB5 229 aa9.14□□□□□ -0.95
CCDC38-206ENST00000548771 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
CCDC38-206ENST00000548771 A6NJR5 290 aa9.13□□□□□ -0.95
CCDC38-206ENST00000548771 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.13□□□□□ -0.95
CCDC38-206ENST00000548771 ATP9BO43861 1147 aa9.13□□□□□ -0.95
CCDC38-206ENST00000548771 MAP2K3P46734 347 aa9.13□□□□□ -0.95
CCDC38-206ENST00000548771 PLA2G4AP47712 749 aa9.13□□□□□ -0.95
CCDC38-206ENST00000548771 EDARADDQ8WWZ3 215 aa9.13□□□□□ -0.95
CCDC38-206ENST00000548771 SCHIP1Q9P0W5 487 aaPredicted RBP9.13□□□□□ -0.95
CCDC38-206ENST00000548771 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 BACH1O14867 736 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 BNIP3LO60238 219 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 DKK1O94907 266 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 CLDN10P78369 228 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 PROSER2Q86WR7 435 aaPredicted RBP9.12□□□□□ -0.95
CCDC38-206ENST00000548771 HCN2Q9UL51 889 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
CCDC38-206ENST00000548771 C2CD2LO14523 706 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 CSB-PGBD3P0DP91 1061 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 EFHC2Q5JST6 749 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 PGBD3Q8N328 593 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 PSMG3-AS1Q96PY0 264 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 KRTAP9-2Q9BYQ4 174 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 ZDHHC3Q9NYG2 299 aa9.11□□□□□ -0.95
CCDC38-206ENST00000548771 ATXN7L1Q9ULK2 861 aaPredicted RBP9.11□□□□□ -0.95
CCDC38-206ENST00000548771 ZDHHC1Q8WTX9 485 aa9.1□□□□□ -0.95
CCDC38-206ENST00000548771 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
CCDC38-206ENST00000548771 PHF24Q9UPV7 400 aa9.1□□□□□ -0.95
CCDC38-206ENST00000548771 C1QTNF9BB2RNN3 333 aa9.09□□□□□ -0.95
CCDC38-206ENST00000548771 ITGB7P26010 798 aa9.09□□□□□ -0.95
CCDC38-206ENST00000548771 TEAD4Q15561 434 aa9.09□□□□□ -0.95
CCDC38-206ENST00000548771 TRIM50Q86XT4 487 aa9.09□□□□□ -0.95
CCDC38-206ENST00000548771 GLMNQ92990 594 aa9.09□□□□□ -0.95
CCDC38-206ENST00000548771 ZIC5Q96T25 663 aa9.09□□□□□ -0.95
CCDC38-206ENST00000548771 ZCCHC2Q9C0B9 1178 aaKnown RBP9.09□□□□□ -0.95
CCDC38-206ENST00000548771 POTEAQ6S8J7 498 aa9.08□□□□□ -0.96
CCDC38-206ENST00000548771 AIDAQ96BJ3 306 aa9.08□□□□□ -0.96
CCDC38-206ENST00000548771 ABHD17AQ96GS6 310 aa9.08□□□□□ -0.96
CCDC38-206ENST00000548771 PCDHGC4Q9Y5F7 938 aa9.08□□□□□ -0.96
CCDC38-206ENST00000548771 KRTAP9-6A0A140TA67 174 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 A0A1W2PNR3 127 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 M0R2N6 131 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 AMPD1P23109 780 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 CHRNA4P43681 627 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 CTBSQ01459 385 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 CCDC102BQ68D86 513 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 CD163Q86VB7 1156 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 TNS4Q8IZW8 715 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 LARGE2Q8N3Y3 721 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 CABP1Q9NZU7 370 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
CCDC38-206ENST00000548771 GGA1Q9UJY5 639 aa9.07□□□□□ -0.96
CCDC38-206ENST00000548771 FGFR3P22607 806 aa9.06□□□□□ -0.96
CCDC38-206ENST00000548771 NOS2P35228 1153 aa9.06□□□□□ -0.96
CCDC38-206ENST00000548771 TNP2Q05952 138 aa9.06□□□□□ -0.96
CCDC38-206ENST00000548771 FIGNL1Q6PIW4 674 aa9.06□□□□□ -0.96
CCDC38-206ENST00000548771 SIX5Q8N196 739 aa9.06□□□□□ -0.96
CCDC38-206ENST00000548771 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
CCDC38-206ENST00000548771 TFIP11Q9UBB9 837 aaKnown RBP9.06□□□□□ -0.96
CCDC38-206ENST00000548771 GDF2Q9UK05 429 aaPredicted RBP9.06□□□□□ -0.96
CCDC38-206ENST00000548771 EML1O00423 815 aa9.05□□□□□ -0.96
CCDC38-206ENST00000548771 TXLNAP40222 546 aa9.05□□□□□ -0.96
CCDC38-206ENST00000548771 PSME1Q06323 249 aa9.05□□□□□ -0.96
CCDC38-206ENST00000548771 NBPF1Q3BBV0 1214 aa9.05□□□□□ -0.96
CCDC38-206ENST00000548771 TPCN2Q8NHX9 752 aa9.05□□□□□ -0.96
CCDC38-206ENST00000548771 L3MBTL2Q969R5 705 aa9.05□□□□□ -0.96
CCDC38-206ENST00000548771 MAFBQ9Y5Q3 323 aaPredicted RBP9.05□□□□□ -0.96
CCDC38-206ENST00000548771 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
CCDC38-206ENST00000548771 PALM3A6NDB9 673 aaPredicted RBP9.04□□□□□ -0.96
CCDC38-206ENST00000548771 BMP4P12644 408 aa9.04□□□□□ -0.96
CCDC38-206ENST00000548771 FAM182BQ5T319 152 aa9.04□□□□□ -0.96
CCDC38-206ENST00000548771 SLC9A9Q8IVB4 645 aa9.04□□□□□ -0.96
CCDC38-206ENST00000548771 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms