RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 CANXP27824 592 aaKnown RBP26.26■■□□□ 1.79
RBFOX1-211ENST00000548749 TEX13AQ9BXU3 409 aaPredicted RBP26.26■■□□□ 1.79
RBFOX1-211ENST00000548749 MIS18AQ9NYP9 233 aa26.26■■□□□ 1.79
RBFOX1-211ENST00000548749 MMP10P09238 476 aa26.25■■□□□ 1.79
RBFOX1-211ENST00000548749 GYS1P13807 737 aa26.25■■□□□ 1.79
RBFOX1-211ENST00000548749 TMPOP42166 694 aaKnown RBP26.25■■□□□ 1.79
RBFOX1-211ENST00000548749 NLGN1Q8N2Q7 840 aa26.25■■□□□ 1.79
RBFOX1-211ENST00000548749 RRP7AQ9Y3A4 280 aaKnown RBP26.25■■□□□ 1.79
RBFOX1-211ENST00000548749 USP42Q9H9J4 1324 aaKnown RBP26.24■■□□□ 1.79
RBFOX1-211ENST00000548749 NLGN2Q8NFZ4 835 aa26.24■■□□□ 1.79
RBFOX1-211ENST00000548749 RUNDC1Q96C34 613 aa26.24■■□□□ 1.79
RBFOX1-211ENST00000548749 COL15A1P39059 1388 aa26.23■■□□□ 1.79
RBFOX1-211ENST00000548749 ANP32CO43423 234 aa26.23■■□□□ 1.79
RBFOX1-211ENST00000548749 NEUROD2Q15784 382 aa26.23■■□□□ 1.79
RBFOX1-211ENST00000548749 ZPR1O75312 459 aa26.22■■□□□ 1.79
RBFOX1-211ENST00000548749 PNISRQ8TF01 805 aaKnown RBP26.22■■□□□ 1.79
RBFOX1-211ENST00000548749 LMOD3Q0VAK6 560 aa26.21■■□□□ 1.79
RBFOX1-211ENST00000548749 ZNF330Q9Y3S2 320 aaPredicted RBP26.21■■□□□ 1.79
RBFOX1-211ENST00000548749 KDM3BQ7LBC6 1761 aa26.2■■□□□ 1.79
RBFOX1-211ENST00000548749 PRAMEF22A3QJZ6 481 aa26.2■■□□□ 1.78
RBFOX1-211ENST00000548749 SNRPA1P09661 255 aaKnown RBP26.2■■□□□ 1.78
RBFOX1-211ENST00000548749 CD2APQ9Y5K6 639 aa26.2■■□□□ 1.78
RBFOX1-211ENST00000548749 A1BGP04217 495 aa26.19■■□□□ 1.78
RBFOX1-211ENST00000548749 FKBP8Q14318 412 aa26.19■■□□□ 1.78
RBFOX1-211ENST00000548749 CCDC184Q52MB2 194 aa26.19■■□□□ 1.78
RBFOX1-211ENST00000548749 USPL1Q5W0Q7 1092 aa26.19■■□□□ 1.78
RBFOX1-211ENST00000548749 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
RBFOX1-211ENST00000548749 USP16Q9Y5T5 823 aa26.19■■□□□ 1.78
RBFOX1-211ENST00000548749 EIF5P55010 431 aaKnown RBP26.17■■□□□ 1.78
RBFOX1-211ENST00000548749 NARFQ9UHQ1 456 aa26.17■■□□□ 1.78
RBFOX1-211ENST00000548749 PARP3Q9Y6F1 533 aa26.17■■□□□ 1.78
RBFOX1-211ENST00000548749 GPR162Q16538 588 aa26.16■■□□□ 1.78
RBFOX1-211ENST00000548749 A0A087WZG4 1122 aa26.15■■□□□ 1.78
RBFOX1-211ENST00000548749 PIP4K2AP48426 406 aaPredicted RBP26.15■■□□□ 1.78
RBFOX1-211ENST00000548749 NPM2Q86SE8 214 aaKnown RBP26.15■■□□□ 1.78
RBFOX1-211ENST00000548749 IL6STP40189 918 aaPredicted RBP26.14■■□□□ 1.78
RBFOX1-211ENST00000548749 TSPYL4Q9UJ04 414 aa26.14■■□□□ 1.78
RBFOX1-211ENST00000548749 EIF4A1P60842 406 aaKnown RBP26.13■■□□□ 1.77
RBFOX1-211ENST00000548749 MRS2Q9HD23 443 aa26.12■■□□□ 1.77
RBFOX1-211ENST00000548749 TRIM35Q9UPQ4 493 aa26.12■■□□□ 1.77
RBFOX1-211ENST00000548749 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
RBFOX1-211ENST00000548749 DDR1Q08345 913 aa26.11■■□□□ 1.77
RBFOX1-211ENST00000548749 TBC1D2BQ9UPU7 963 aa26.11■■□□□ 1.77
RBFOX1-211ENST00000548749 APAF1O14727 1248 aa26.1■■□□□ 1.77
RBFOX1-211ENST00000548749 BCL2L12Q9HB09 334 aa26.1■■□□□ 1.77
RBFOX1-211ENST00000548749 GIGYF1O75420 1035 aaPredicted RBP26.09■■□□□ 1.77
RBFOX1-211ENST00000548749 TM4SF1P30408 202 aa26.09■■□□□ 1.77
RBFOX1-211ENST00000548749 KIF13BQ9NQT8 1826 aa26.09■■□□□ 1.77
RBFOX1-211ENST00000548749 C10orf71Q711Q0 1435 aa26.08■■□□□ 1.77
RBFOX1-211ENST00000548749 POLRMTO00411 1230 aaKnown RBP26.08■■□□□ 1.77
RBFOX1-211ENST00000548749 NFIXQ14938 502 aa26.08■■□□□ 1.77
RBFOX1-211ENST00000548749 WWC3Q9ULE0 1092 aa26.08■■□□□ 1.77
RBFOX1-211ENST00000548749 LAS1LQ9Y4W2 734 aaKnown RBP26.08■■□□□ 1.77
RBFOX1-211ENST00000548749 SCN7AQ01118 1682 aa26.08■■□□□ 1.77
RBFOX1-211ENST00000548749 DZIP3Q86Y13 1208 aaKnown RBP26.07■■□□□ 1.76
RBFOX1-211ENST00000548749 BABAM1Q9NWV8 329 aa26.07■■□□□ 1.76
RBFOX1-211ENST00000548749 NBPF26B4DH59 902 aa26.06■■□□□ 1.76
RBFOX1-211ENST00000548749 YBX3P16989 372 aaKnown RBP eCLIP26.06■■□□□ 1.76
RBFOX1-211ENST00000548749 NBPF10Q6P3W6 841 aaKnown RBP26.06■■□□□ 1.76
RBFOX1-211ENST00000548749 BICDL1Q6ZP65 573 aa26.06■■□□□ 1.76
RBFOX1-211ENST00000548749 NBPF15Q8N660 670 aa26.06■■□□□ 1.76
RBFOX1-211ENST00000548749 N4BP2Q86UW6 1770 aaPredicted RBP26.05■■□□□ 1.76
RBFOX1-211ENST00000548749 YY1P25490 414 aa26.04■■□□□ 1.76
RBFOX1-211ENST00000548749 PXDNLA1KZ92 1463 aa26.04■■□□□ 1.76
RBFOX1-211ENST00000548749 BCORQ6W2J9 1755 aa26.03■■□□□ 1.76
RBFOX1-211ENST00000548749 AFDNP55196 1824 aaKnown RBP26.03■■□□□ 1.76
RBFOX1-211ENST00000548749 CAMTA2O94983 1202 aa26.03■■□□□ 1.76
RBFOX1-211ENST00000548749 TGFB2P61812 414 aa26.03■■□□□ 1.76
RBFOX1-211ENST00000548749 TBC1D9BQ66K14 1250 aa26.03■■□□□ 1.76
RBFOX1-211ENST00000548749 KIAA1551Q9HCM1 1747 aa26.02■■□□□ 1.76
RBFOX1-211ENST00000548749 A0A0G2JLW4 131 aa26.01■■□□□ 1.75
RBFOX1-211ENST00000548749 CHL1O00533 1208 aa26.01■■□□□ 1.75
RBFOX1-211ENST00000548749 SERPINB2P05120 415 aa26.01■■□□□ 1.75
RBFOX1-211ENST00000548749 NGEFQ8N5V2 710 aa26.01■■□□□ 1.75
RBFOX1-211ENST00000548749 CHD4Q14839 1912 aa26■■□□□ 1.75
RBFOX1-211ENST00000548749 SENP3-EIF4A1A0A087X0R7 540 aa26■■□□□ 1.75
RBFOX1-211ENST00000548749 GRIN3BO60391 1043 aa25.99■■□□□ 1.75
RBFOX1-211ENST00000548749 MYL6BP14649 208 aa25.99■■□□□ 1.75
RBFOX1-211ENST00000548749 DPEP1P16444 411 aa25.99■■□□□ 1.75
RBFOX1-211ENST00000548749 EIF2S2P20042 333 aaKnown RBP25.99■■□□□ 1.75
RBFOX1-211ENST00000548749 NRXN2Q9P2S2 1712 aa25.98■■□□□ 1.75
RBFOX1-211ENST00000548749 CFAP44Q96MT7 982 aa25.97■■□□□ 1.75
RBFOX1-211ENST00000548749 ZNF652Q9Y2D9 606 aa25.97■■□□□ 1.75
RBFOX1-211ENST00000548749 CALD1Q05682 793 aaKnown RBP25.96■■□□□ 1.75
RBFOX1-211ENST00000548749 KRT24Q2M2I5 525 aa25.96■■□□□ 1.75
RBFOX1-211ENST00000548749 SETDB2Q96T68 719 aa25.96■■□□□ 1.75
RBFOX1-211ENST00000548749 CARMIL3Q8ND23 1372 aa25.95■■□□□ 1.75
RBFOX1-211ENST00000548749 UTRNP46939 3433 aa25.95■■□□□ 1.74
RBFOX1-211ENST00000548749 NECTIN2Q92692 538 aa25.95■■□□□ 1.74
RBFOX1-211ENST00000548749 ERBB4Q15303 1308 aa25.94■■□□□ 1.74
RBFOX1-211ENST00000548749 CLEC4GQ6UXB4 293 aa25.94■■□□□ 1.74
RBFOX1-211ENST00000548749 MBIPQ9NS73 344 aa25.94■■□□□ 1.74
RBFOX1-211ENST00000548749 GOLGB1Q14789 3259 aaKnown RBP25.93■■□□□ 1.74
RBFOX1-211ENST00000548749 NPHP1O15259 732 aa25.93■■□□□ 1.74
RBFOX1-211ENST00000548749 CHRNA5P30532 468 aa25.93■■□□□ 1.74
RBFOX1-211ENST00000548749 IFT57Q9NWB7 429 aa25.93■■□□□ 1.74
RBFOX1-211ENST00000548749 BCS1LQ9Y276 419 aa25.93■■□□□ 1.74
RBFOX1-211ENST00000548749 GNAI1P63096 354 aa25.92■■□□□ 1.74
RBFOX1-211ENST00000548749 KIF6Q6ZMV9 814 aa25.92■■□□□ 1.74
RBFOX1-211ENST00000548749 TTLL7Q6ZT98 887 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms