RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 TOM1L2Q6ZVM7 507 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 TCP11L2Q8N4U5 519 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 GAS2L2Q8NHY3 880 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 RAPGEF4Q8WZA2 1011 aa8.2□□□□□ -1.1
PTPRR-207ENST00000548220 PKD1L3Q7Z443 1732 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 OVOS2A0A0G2JMS6 1433 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 PDE3BQ13370 1112 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 MEX3CQ5U5Q3 659 aaKnown RBP8.19□□□□□ -1.1
PTPRR-207ENST00000548220 FAM9BQ8IZU0 186 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 C8orf37Q96NL8 207 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 BABAM1Q9NWV8 329 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 NLRP2Q9NX02 1062 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 USP21Q9UK80 565 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 TRPC5Q9UL62 973 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-207ENST00000548220 SPG7Q9UQ90 795 aa8.19□□□□□ -1.1
PTPRR-207ENST00000548220 HSP90AB1P08238 724 aaKnown RBP8.18□□□□□ -1.1
PTPRR-207ENST00000548220 IL2RBP14784 551 aa8.18□□□□□ -1.1
PTPRR-207ENST00000548220 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
PTPRR-207ENST00000548220 PRKAR2BP31323 418 aa8.18□□□□□ -1.1
PTPRR-207ENST00000548220 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
PTPRR-207ENST00000548220 LARP1Q6PKG0 1096 aaKnown RBP8.18□□□□□ -1.1
PTPRR-207ENST00000548220 WDR63Q8IWG1 891 aa8.18□□□□□ -1.1
PTPRR-207ENST00000548220 TSHZ2Q9NRE2 1034 aa8.18□□□□□ -1.1
PTPRR-207ENST00000548220 KAT6BQ8WYB5 2073 aa8.18□□□□□ -1.1
PTPRR-207ENST00000548220 WNK3Q9BYP7 1800 aa8.18□□□□□ -1.1
PTPRR-207ENST00000548220 DLG5Q8TDM6 1919 aa8.17□□□□□ -1.1
PTPRR-207ENST00000548220 IL16Q14005 1332 aa8.17□□□□□ -1.1
PTPRR-207ENST00000548220 ZBED9Q6R2W3 1325 aa8.17□□□□□ -1.1
PTPRR-207ENST00000548220 DISP2A7MBM2 1401 aa8.17□□□□□ -1.1
PTPRR-207ENST00000548220 ATRNO75882 1429 aa8.17□□□□□ -1.1
PTPRR-207ENST00000548220 TMPOP42166 694 aaKnown RBP8.17□□□□□ -1.1
PTPRR-207ENST00000548220 NKX1-1Q15270 411 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-207ENST00000548220 LTV1Q96GA3 475 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-207ENST00000548220 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-207ENST00000548220 KCNK17Q96T54 332 aa8.17□□□□□ -1.1
PTPRR-207ENST00000548220 ADAMTS7Q9UKP4 1686 aa8.17□□□□□ -1.1
PTPRR-207ENST00000548220 AFF2P51816 1311 aa8.16□□□□□ -1.1
PTPRR-207ENST00000548220 BCL9O00512 1426 aa8.16□□□□□ -1.1
PTPRR-207ENST00000548220 ZBTB7CA1YPR0 619 aa8.16□□□□□ -1.1
PTPRR-207ENST00000548220 HMOX1P09601 288 aa8.16□□□□□ -1.1
PTPRR-207ENST00000548220 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
PTPRR-207ENST00000548220 ZCRB1Q8TBF4 217 aaKnown RBP8.16□□□□□ -1.1
PTPRR-207ENST00000548220 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
PTPRR-207ENST00000548220 ZNF521Q96K83 1311 aa8.16□□□□□ -1.1
PTPRR-207ENST00000548220 GNAT3A8MTJ3 354 aa8.15□□□□□ -1.1
PTPRR-207ENST00000548220 APAF1O14727 1248 aa8.15□□□□□ -1.1
PTPRR-207ENST00000548220 HMGB2P26583 209 aaKnown RBP8.15□□□□□ -1.1
PTPRR-207ENST00000548220 RBM6P78332 1123 aaKnown RBP8.15□□□□□ -1.1
PTPRR-207ENST00000548220 AEBP1Q8IUX7 1158 aa8.15□□□□□ -1.1
PTPRR-207ENST00000548220 IFNL2Q8IZJ0 200 aa8.15□□□□□ -1.1
PTPRR-207ENST00000548220 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
PTPRR-207ENST00000548220 PHACTR3Q96KR7 559 aa8.15□□□□□ -1.1
PTPRR-207ENST00000548220 STRN4Q9NRL3 753 aa8.15□□□□□ -1.1
PTPRR-207ENST00000548220 PCDH11XQ9BZA7 1347 aa8.15□□□□□ -1.11
PTPRR-207ENST00000548220 PCDH11YQ9BZA8 1340 aa8.15□□□□□ -1.11
PTPRR-207ENST00000548220 VIRMAQ69YN4 1812 aaKnown RBP8.14□□□□□ -1.11
PTPRR-207ENST00000548220 CEMIPQ8WUJ3 1361 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 ERVV-2B6SEH9 535 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 EXOC5O00471 708 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 RIPK4P57078 832 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 C1orf141Q5JVX7 400 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 WWC1Q8IX03 1113 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 CHMP4AQ9BY43 222 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 QTRT2Q9H974 415 aaKnown RBP8.14□□□□□ -1.11
PTPRR-207ENST00000548220 SCN11AQ9UI33 1791 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 THSD7AQ9UPZ6 1657 aa8.14□□□□□ -1.11
PTPRR-207ENST00000548220 SOS1Q07889 1333 aaPredicted RBP8.14□□□□□ -1.11
PTPRR-207ENST00000548220 MAP3K5Q99683 1374 aa8.13□□□□□ -1.11
PTPRR-207ENST00000548220 MEGF6O75095 1541 aa8.13□□□□□ -1.11
PTPRR-207ENST00000548220 HNRNPUQ00839 825 aaKnown RBP eCLIP8.13□□□□□ -1.11
PTPRR-207ENST00000548220 MTHFSDQ2M296 383 aaKnown RBP8.13□□□□□ -1.11
PTPRR-207ENST00000548220 RTF1Q92541 710 aaKnown RBP8.13□□□□□ -1.11
PTPRR-207ENST00000548220 TNS2Q63HR2 1409 aa8.13□□□□□ -1.11
PTPRR-207ENST00000548220 CACNA1FO60840 1977 aa8.13□□□□□ -1.11
PTPRR-207ENST00000548220 CT47B1P0C2W7 299 aaPredicted RBP8.12□□□□□ -1.11
PTPRR-207ENST00000548220 PHKG2P15735 406 aa8.12□□□□□ -1.11
PTPRR-207ENST00000548220 DDB1Q16531 1140 aa8.12□□□□□ -1.11
PTPRR-207ENST00000548220 TRMT2AQ8IZ69 625 aaKnown RBP8.12□□□□□ -1.11
PTPRR-207ENST00000548220 ZNF454Q8N9F8 522 aa8.12□□□□□ -1.11
PTPRR-207ENST00000548220 VPS9D1Q9Y2B5 631 aa8.12□□□□□ -1.11
PTPRR-207ENST00000548220 SHANK3Q9BYB0 1731 aa8.12□□□□□ -1.11
PTPRR-207ENST00000548220 GLI3P10071 1580 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 E9PSI1 815 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 GNAI1P63096 354 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 ZNF530Q6P9A1 599 aaPredicted RBP8.11□□□□□ -1.11
PTPRR-207ENST00000548220 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 UPF1Q92900 1129 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRR-207ENST00000548220 ZNF428Q96B54 188 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 SLC4A5Q9BY07 1137 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 CRISPLD2Q9H0B8 497 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 IFT57Q9NWB7 429 aa8.11□□□□□ -1.11
PTPRR-207ENST00000548220 SIPA1L3O60292 1781 aaPredicted RBP8.11□□□□□ -1.11
PTPRR-207ENST00000548220 LRRC37A3O60309 1634 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 CYP27B1O15528 508 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 ZNF853P0CG23 659 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 PPP1R15BQ5SWA1 713 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms