RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 LAMC1P11047 1609 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 F13A1P00488 732 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 PIBF1Q8WXW3 757 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 DNAJC25Q9H1X3 360 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.11■□□□□ 0.49
BRF1-211ENST00000547530 H3BQV1 296 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 ANO6Q4KMQ2 910 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 IFFO2Q5TF58 517 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 CCDC30Q5VVM6 783 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 RHPN1Q8TCX5 695 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
BRF1-211ENST00000547530 ZBTB22O15209 634 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 CCDC192P0DO97 292 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 ARID5BQ14865 1188 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 AACSQ86V21 672 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 CNTROBQ8N137 903 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 PRDM4Q9UKN5 801 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 ABCC1P33527 1531 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 SLC52A1Q9NWF4 448 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 UBE2HP62256 183 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 FAM177A1Q8N128 213 aaPredicted RBP18.1■□□□□ 0.49
BRF1-211ENST00000547530 NUP62CLQ9H1M0 184 aa18.1■□□□□ 0.49
BRF1-211ENST00000547530 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 GOLGA6L6A8MZA4 724 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 TNNT1P13805 278 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 HMGN5P82970 282 aaKnown RBP18.09■□□□□ 0.49
BRF1-211ENST00000547530 FAM227BQ96M60 508 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 CYP46A1Q9Y6A2 500 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 ZKSCAN1P17029 563 aaPredicted RBP18.09■□□□□ 0.49
BRF1-211ENST00000547530 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 MAP3K19Q56UN5 1328 aa18.09■□□□□ 0.49
BRF1-211ENST00000547530 CDC37L1Q7L3B6 337 aa18.08■□□□□ 0.49
BRF1-211ENST00000547530 FSD1Q9BTV5 496 aa18.08■□□□□ 0.49
BRF1-211ENST00000547530 ACEP12821 1306 aa18.08■□□□□ 0.49
BRF1-211ENST00000547530 BECN2A8MW95 431 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 ATP8B2P98198 1209 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 PTPN21Q16825 1174 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 CLEC17AQ6ZS10 378 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 SPATA32Q96LK8 384 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 SOS1Q07889 1333 aaPredicted RBP18.08■□□□□ 0.48
BRF1-211ENST00000547530 KCNQ3O43525 872 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 CHGBP05060 677 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 ATP6V1DQ9Y5K8 247 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
BRF1-211ENST00000547530 GOLGA6L19H0YKK7 550 aa18.07■□□□□ 0.48
BRF1-211ENST00000547530 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
BRF1-211ENST00000547530 USP44Q9H0E7 712 aa18.07■□□□□ 0.48
BRF1-211ENST00000547530 ZFYVE16Q7Z3T8 1539 aa18.07■□□□□ 0.48
BRF1-211ENST00000547530 CWF19L2Q2TBE0 894 aaKnown RBP18.07■□□□□ 0.48
BRF1-211ENST00000547530 DNAJC2Q99543 621 aaKnown RBP18.07■□□□□ 0.48
BRF1-211ENST00000547530 VGLL3A8MV65 326 aa18.07■□□□□ 0.48
BRF1-211ENST00000547530 MCM5P33992 734 aa18.07■□□□□ 0.48
BRF1-211ENST00000547530 MAP3K11Q16584 847 aa18.06■□□□□ 0.48
BRF1-211ENST00000547530 ZFP91Q96JP5 570 aaPredicted RBP18.06■□□□□ 0.48
BRF1-211ENST00000547530 CHPF2Q9P2E5 772 aa18.06■□□□□ 0.48
BRF1-211ENST00000547530 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
BRF1-211ENST00000547530 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
BRF1-211ENST00000547530 EYA1Q99502 592 aa18.06■□□□□ 0.48
BRF1-211ENST00000547530 FTOQ9C0B1 505 aaKnown RBP eCLIP18.05■□□□□ 0.48
BRF1-211ENST00000547530 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
BRF1-211ENST00000547530 ASXL2Q76L83 1435 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 PTPRCP08575 1304 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 BIN1O00499 593 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 ME3Q16798 604 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 HSP90AA4PQ58FG1 418 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 KCNF1Q9H3M0 494 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 VIRMAQ69YN4 1812 aaKnown RBP18.05■□□□□ 0.48
BRF1-211ENST00000547530 FAM184AQ8NB25 1140 aa18.05■□□□□ 0.48
BRF1-211ENST00000547530 IBTKQ9P2D0 1353 aaPredicted RBP18.04■□□□□ 0.48
BRF1-211ENST00000547530 MYL6BP14649 208 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
BRF1-211ENST00000547530 KRT85P78386 507 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 ZRSR1Q15695 479 aaKnown RBP18.04■□□□□ 0.48
BRF1-211ENST00000547530 TTC6Q86TZ1 520 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 JAK2O60674 1132 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 TYRO3Q06418 890 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 MTERF4Q7Z6M4 381 aaKnown RBP18.04■□□□□ 0.48
BRF1-211ENST00000547530 CLIP2Q9UDT6 1046 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 MYOM2P54296 1465 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 CCDC112Q8NEF3 446 aa18.04■□□□□ 0.48
BRF1-211ENST00000547530 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
BRF1-211ENST00000547530 ZNF165P49910 485 aa18.03■□□□□ 0.48
BRF1-211ENST00000547530 TEFQ10587 303 aa18.03■□□□□ 0.48
BRF1-211ENST00000547530 CUL4AQ13619 759 aa18.03■□□□□ 0.48
BRF1-211ENST00000547530 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
BRF1-211ENST00000547530 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
BRF1-211ENST00000547530 POGZQ7Z3K3 1410 aa18.03■□□□□ 0.48
BRF1-211ENST00000547530 QRICH2Q9H0J4 1663 aa18.02■□□□□ 0.48
BRF1-211ENST00000547530 HSPA4P34932 840 aa18.02■□□□□ 0.48
BRF1-211ENST00000547530 ATP10DQ9P241 1426 aa18.02■□□□□ 0.48
BRF1-211ENST00000547530 SLFNL1Q499Z3 407 aa18.02■□□□□ 0.47
BRF1-211ENST00000547530 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.47
BRF1-211ENST00000547530 RBM8AQ9Y5S9 174 aaKnown RBP18.02■□□□□ 0.47
BRF1-211ENST00000547530 SGSM2O43147 1006 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms