RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 PNISRQ8TF01 805 aaKnown RBP31.66■■■□□ 2.66
RBFOX1-209ENST00000547427 KLHL34Q8N239 644 aa31.65■■■□□ 2.66
RBFOX1-209ENST00000547427 FHDC1Q9C0D6 1143 aaPredicted RBP31.65■■■□□ 2.66
RBFOX1-209ENST00000547427 MRS2Q9HD23 443 aa31.65■■■□□ 2.66
RBFOX1-209ENST00000547427 MIS18AQ9NYP9 233 aa31.65■■■□□ 2.66
RBFOX1-209ENST00000547427 C4AP0C0L4 1744 aa31.63■■■□□ 2.65
RBFOX1-209ENST00000547427 ZBTB1Q9Y2K1 713 aa31.62■■■□□ 2.65
RBFOX1-209ENST00000547427 CANXP27824 592 aaKnown RBP31.61■■■□□ 2.65
RBFOX1-209ENST00000547427 KDM3BQ7LBC6 1761 aa31.6■■■□□ 2.65
RBFOX1-209ENST00000547427 SNRPA1P09661 255 aaKnown RBP31.59■■■□□ 2.65
RBFOX1-209ENST00000547427 SYT17Q9BSW7 474 aa31.59■■■□□ 2.65
RBFOX1-209ENST00000547427 SOS1Q07889 1333 aaPredicted RBP31.58■■■□□ 2.65
RBFOX1-209ENST00000547427 NLGN1Q8N2Q7 840 aa31.58■■■□□ 2.65
RBFOX1-209ENST00000547427 ZPR1O75312 459 aa31.56■■■□□ 2.64
RBFOX1-209ENST00000547427 COL15A1P39059 1388 aa31.56■■■□□ 2.64
RBFOX1-209ENST00000547427 DCAF8L1A6NGE4 600 aa31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 APAF1O14727 1248 aa31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 GYS1P13807 737 aa31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 NPM2Q86SE8 214 aaKnown RBP31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 SRP68Q9UHB9 627 aaKnown RBP31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 TSPYL4Q9UJ04 414 aa31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 ZNF330Q9Y3S2 320 aaPredicted RBP31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 USP16Q9Y5T5 823 aa31.55■■■□□ 2.64
RBFOX1-209ENST00000547427 USP42Q9H9J4 1324 aaKnown RBP31.53■■■□□ 2.64
RBFOX1-209ENST00000547427 PRAMEF22A3QJZ6 481 aa31.53■■■□□ 2.64
RBFOX1-209ENST00000547427 TRIM35Q9UPQ4 493 aa31.53■■■□□ 2.64
RBFOX1-209ENST00000547427 A1BGP04217 495 aa31.52■■■□□ 2.64
RBFOX1-209ENST00000547427 MMP10P09238 476 aa31.52■■■□□ 2.64
RBFOX1-209ENST00000547427 EIF4A1P60842 406 aaKnown RBP31.51■■■□□ 2.63
RBFOX1-209ENST00000547427 A0A087WZG4 1122 aa31.5■■■□□ 2.63
RBFOX1-209ENST00000547427 LAS1LQ9Y4W2 734 aaKnown RBP31.5■■■□□ 2.63
RBFOX1-209ENST00000547427 EIF5P55010 431 aaKnown RBP31.49■■■□□ 2.63
RBFOX1-209ENST00000547427 USPL1Q5W0Q7 1092 aa31.49■■■□□ 2.63
RBFOX1-209ENST00000547427 BABAM1Q9NWV8 329 aa31.49■■■□□ 2.63
RBFOX1-209ENST00000547427 LAMB4A4D0S4 1761 aa31.48■■■□□ 2.63
RBFOX1-209ENST00000547427 IL6STP40189 918 aaPredicted RBP31.48■■■□□ 2.63
RBFOX1-209ENST00000547427 NARFQ9UHQ1 456 aa31.48■■■□□ 2.63
RBFOX1-209ENST00000547427 PARP3Q9Y6F1 533 aa31.47■■■□□ 2.63
RBFOX1-209ENST00000547427 GIGYF1O75420 1035 aaPredicted RBP31.46■■■□□ 2.63
RBFOX1-209ENST00000547427 FKBP8Q14318 412 aa31.46■■■□□ 2.63
RBFOX1-209ENST00000547427 PIP4K2AP48426 406 aaPredicted RBP31.45■■■□□ 2.63
RBFOX1-209ENST00000547427 CD2APQ9Y5K6 639 aa31.45■■■□□ 2.63
RBFOX1-209ENST00000547427 TBC1D2BQ9UPU7 963 aa31.43■■■□□ 2.62
RBFOX1-209ENST00000547427 CALD1Q05682 793 aaKnown RBP31.42■■■□□ 2.62
RBFOX1-209ENST00000547427 NLGN2Q8NFZ4 835 aa31.42■■■□□ 2.62
RBFOX1-209ENST00000547427 CHL1O00533 1208 aa31.41■■■□□ 2.62
RBFOX1-209ENST00000547427 FAM9BQ8IZU0 186 aa31.41■■■□□ 2.62
RBFOX1-209ENST00000547427 SENP3-EIF4A1A0A087X0R7 540 aa31.39■■■□□ 2.62
RBFOX1-209ENST00000547427 DZIP3Q86Y13 1208 aaKnown RBP31.39■■■□□ 2.62
RBFOX1-209ENST00000547427 PELP1Q8IZL8 1130 aaKnown RBP31.38■■■□□ 2.61
RBFOX1-209ENST00000547427 CFAP44Q96MT7 982 aa31.38■■■□□ 2.61
RBFOX1-209ENST00000547427 NBPF26B4DH59 902 aa31.37■■■□□ 2.61
RBFOX1-209ENST00000547427 NBPF10Q6P3W6 841 aaKnown RBP31.37■■■□□ 2.61
RBFOX1-209ENST00000547427 NBPF15Q8N660 670 aa31.37■■■□□ 2.61
RBFOX1-209ENST00000547427 BCL2L12Q9HB09 334 aa31.37■■■□□ 2.61
RBFOX1-209ENST00000547427 SCN7AQ01118 1682 aa31.36■■■□□ 2.61
RBFOX1-209ENST00000547427 EIF2S2P20042 333 aaKnown RBP31.35■■■□□ 2.61
RBFOX1-209ENST00000547427 TM4SF1P30408 202 aa31.35■■■□□ 2.61
RBFOX1-209ENST00000547427 DDR1Q08345 913 aa31.35■■■□□ 2.61
RBFOX1-209ENST00000547427 GPR162Q16538 588 aa31.35■■■□□ 2.61
RBFOX1-209ENST00000547427 GNAI1P63096 354 aa31.34■■■□□ 2.61
RBFOX1-209ENST00000547427 NFIXQ14938 502 aa31.34■■■□□ 2.61
RBFOX1-209ENST00000547427 BICDL1Q6ZP65 573 aa31.34■■■□□ 2.61
RBFOX1-209ENST00000547427 POLRMTO00411 1230 aaKnown RBP31.33■■■□□ 2.61
RBFOX1-209ENST00000547427 NGEFQ8N5V2 710 aa31.33■■■□□ 2.61
RBFOX1-209ENST00000547427 IFT57Q9NWB7 429 aa31.33■■■□□ 2.61
RBFOX1-209ENST00000547427 KIF13BQ9NQT8 1826 aa31.33■■■□□ 2.61
RBFOX1-209ENST00000547427 BCORQ6W2J9 1755 aa31.33■■■□□ 2.61
RBFOX1-209ENST00000547427 CAMTA2O94983 1202 aa31.32■■■□□ 2.6
RBFOX1-209ENST00000547427 MYL6BP14649 208 aa31.32■■■□□ 2.6
RBFOX1-209ENST00000547427 MBIPQ9NS73 344 aa31.32■■■□□ 2.6
RBFOX1-209ENST00000547427 CCDC27Q2M243 656 aa31.3■■■□□ 2.6
RBFOX1-209ENST00000547427 AFDNP55196 1824 aaKnown RBP31.3■■■□□ 2.6
RBFOX1-209ENST00000547427 C10orf71Q711Q0 1435 aa31.3■■■□□ 2.6
RBFOX1-209ENST00000547427 ERBB4Q15303 1308 aa31.29■■■□□ 2.6
RBFOX1-209ENST00000547427 KRT24Q2M2I5 525 aa31.29■■■□□ 2.6
RBFOX1-209ENST00000547427 TBC1D9BQ66K14 1250 aa31.29■■■□□ 2.6
RBFOX1-209ENST00000547427 ZNF652Q9Y2D9 606 aa31.29■■■□□ 2.6
RBFOX1-209ENST00000547427 SALL2Q9Y467 1007 aaPredicted RBP31.29■■■□□ 2.6
RBFOX1-209ENST00000547427 SERPINB2P05120 415 aa31.28■■■□□ 2.6
RBFOX1-209ENST00000547427 ZNF853P0CG23 659 aa31.28■■■□□ 2.6
RBFOX1-209ENST00000547427 WWC1Q8IX03 1113 aa31.28■■■□□ 2.6
RBFOX1-209ENST00000547427 NECTIN2Q92692 538 aa31.28■■■□□ 2.6
RBFOX1-209ENST00000547427 TGFB2P61812 414 aa31.27■■■□□ 2.6
RBFOX1-209ENST00000547427 N4BP2Q86UW6 1770 aaPredicted RBP31.27■■■□□ 2.6
RBFOX1-209ENST00000547427 SETDB2Q96T68 719 aa31.26■■■□□ 2.59
RBFOX1-209ENST00000547427 NCBP3Q53F19 620 aaKnown RBP31.25■■■□□ 2.59
RBFOX1-209ENST00000547427 CLEC4GQ6UXB4 293 aa31.25■■■□□ 2.59
RBFOX1-209ENST00000547427 KIF6Q6ZMV9 814 aa31.25■■■□□ 2.59
RBFOX1-209ENST00000547427 WWC3Q9ULE0 1092 aa31.24■■■□□ 2.59
RBFOX1-209ENST00000547427 CARMIL3Q8ND23 1372 aa31.23■■■□□ 2.59
RBFOX1-209ENST00000547427 NPHP1O15259 732 aa31.23■■■□□ 2.59
RBFOX1-209ENST00000547427 HOXB7P09629 217 aa31.23■■■□□ 2.59
RBFOX1-209ENST00000547427 DUSP27Q5VZP5 1158 aa31.23■■■□□ 2.59
RBFOX1-209ENST00000547427 NRXN2Q9P2S2 1712 aa31.23■■■□□ 2.59
RBFOX1-209ENST00000547427 A0A0G2JLW4 131 aa31.22■■■□□ 2.59
RBFOX1-209ENST00000547427 HDGFL1Q5TGJ6 251 aa31.22■■■□□ 2.59
RBFOX1-209ENST00000547427 PXDNLA1KZ92 1463 aa31.21■■■□□ 2.59
RBFOX1-209ENST00000547427 DIEXFQ68CQ4 756 aaKnown RBP31.21■■■□□ 2.59
RBFOX1-209ENST00000547427 KIAA1551Q9HCM1 1747 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms