RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 CCDC184Q52MB2 194 aa30.87■■■□□ 2.53
SMARCC2-204ENST00000547356 PRAMEF22A3QJZ6 481 aa30.86■■■□□ 2.53
SMARCC2-204ENST00000547356 TAF7Q15545 349 aaPredicted RBP30.86■■■□□ 2.53
SMARCC2-204ENST00000547356 MMP10P09238 476 aa30.85■■■□□ 2.53
SMARCC2-204ENST00000547356 CANXP27824 592 aaKnown RBP30.85■■■□□ 2.53
SMARCC2-204ENST00000547356 TMPOP42166 694 aaKnown RBP30.85■■■□□ 2.53
SMARCC2-204ENST00000547356 RIPK4P57078 832 aa30.85■■■□□ 2.53
SMARCC2-204ENST00000547356 USP42Q9H9J4 1324 aaKnown RBP30.83■■■□□ 2.53
SMARCC2-204ENST00000547356 STARD3NLO95772 234 aa30.83■■■□□ 2.53
SMARCC2-204ENST00000547356 NEUROD2Q15784 382 aa30.82■■■□□ 2.52
SMARCC2-204ENST00000547356 COL15A1P39059 1388 aa30.81■■■□□ 2.52
SMARCC2-204ENST00000547356 RUNDC1Q96C34 613 aa30.81■■■□□ 2.52
SMARCC2-204ENST00000547356 A1BGP04217 495 aa30.8■■■□□ 2.52
SMARCC2-204ENST00000547356 FKBP8Q14318 412 aa30.8■■■□□ 2.52
SMARCC2-204ENST00000547356 NLGN1Q8N2Q7 840 aa30.8■■■□□ 2.52
SMARCC2-204ENST00000547356 USP16Q9Y5T5 823 aa30.8■■■□□ 2.52
SMARCC2-204ENST00000547356 TEX13AQ9BXU3 409 aaPredicted RBP30.79■■■□□ 2.52
SMARCC2-204ENST00000547356 PIP4K2AP48426 406 aaPredicted RBP30.78■■■□□ 2.52
SMARCC2-204ENST00000547356 USPL1Q5W0Q7 1092 aa30.78■■■□□ 2.52
SMARCC2-204ENST00000547356 KDM3BQ7LBC6 1761 aa30.77■■■□□ 2.52
SMARCC2-204ENST00000547356 ZNF330Q9Y3S2 320 aaPredicted RBP30.77■■■□□ 2.52
SMARCC2-204ENST00000547356 SNRPA1P09661 255 aaKnown RBP30.76■■■□□ 2.51
SMARCC2-204ENST00000547356 DCAF8L1A6NGE4 600 aa30.75■■■□□ 2.51
SMARCC2-204ENST00000547356 ANP32CO43423 234 aa30.75■■■□□ 2.51
SMARCC2-204ENST00000547356 ZPR1O75312 459 aa30.75■■■□□ 2.51
SMARCC2-204ENST00000547356 EIF5P55010 431 aaKnown RBP30.75■■■□□ 2.51
SMARCC2-204ENST00000547356 CD2APQ9Y5K6 639 aa30.75■■■□□ 2.51
SMARCC2-204ENST00000547356 PELP1Q8IZL8 1130 aaKnown RBP30.74■■■□□ 2.51
SMARCC2-204ENST00000547356 PNISRQ8TF01 805 aaKnown RBP30.74■■■□□ 2.51
SMARCC2-204ENST00000547356 DDR1Q08345 913 aa30.73■■■□□ 2.51
SMARCC2-204ENST00000547356 BCL2L12Q9HB09 334 aa30.73■■■□□ 2.51
SMARCC2-204ENST00000547356 NARFQ9UHQ1 456 aa30.73■■■□□ 2.51
SMARCC2-204ENST00000547356 TRIM35Q9UPQ4 493 aa30.73■■■□□ 2.51
SMARCC2-204ENST00000547356 EIF4A1P60842 406 aaKnown RBP30.71■■■□□ 2.51
SMARCC2-204ENST00000547356 LMOD3Q0VAK6 560 aa30.71■■■□□ 2.51
SMARCC2-204ENST00000547356 PARP3Q9Y6F1 533 aa30.71■■■□□ 2.51
SMARCC2-204ENST00000547356 GPR162Q16538 588 aa30.7■■■□□ 2.51
SMARCC2-204ENST00000547356 TSPYL4Q9UJ04 414 aa30.7■■■□□ 2.51
SMARCC2-204ENST00000547356 WWC3Q9ULE0 1092 aa30.7■■■□□ 2.51
SMARCC2-204ENST00000547356 IL6STP40189 918 aaPredicted RBP30.69■■■□□ 2.5
SMARCC2-204ENST00000547356 TBC1D2BQ9UPU7 963 aa30.69■■■□□ 2.5
SMARCC2-204ENST00000547356 APAF1O14727 1248 aa30.68■■■□□ 2.5
SMARCC2-204ENST00000547356 C10orf71Q711Q0 1435 aa30.67■■■□□ 2.5
SMARCC2-204ENST00000547356 MRS2Q9HD23 443 aa30.67■■■□□ 2.5
SMARCC2-204ENST00000547356 A0A087WZG4 1122 aa30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 SENP3-EIF4A1A0A087X0R7 540 aa30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 NBPF26B4DH59 902 aa30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 GIGYF1O75420 1035 aaPredicted RBP30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 YBX3P16989 372 aaKnown RBP eCLIP30.66■■■□□ 2.57e-7■□□□□ 11
SMARCC2-204ENST00000547356 TM4SF1P30408 202 aa30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 NFIXQ14938 502 aa30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 NBPF10Q6P3W6 841 aaKnown RBP30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 NBPF15Q8N660 670 aa30.66■■■□□ 2.5
SMARCC2-204ENST00000547356 POLRMTO00411 1230 aaKnown RBP30.65■■■□□ 2.5
SMARCC2-204ENST00000547356 LAMB4A4D0S4 1761 aa30.64■■■□□ 2.5
SMARCC2-204ENST00000547356 SCN7AQ01118 1682 aa30.63■■■□□ 2.49
SMARCC2-204ENST00000547356 BICDL1Q6ZP65 573 aa30.63■■■□□ 2.49
SMARCC2-204ENST00000547356 LAS1LQ9Y4W2 734 aaKnown RBP30.63■■■□□ 2.49
SMARCC2-204ENST00000547356 PXDNLA1KZ92 1463 aa30.62■■■□□ 2.49
SMARCC2-204ENST00000547356 KIF13BQ9NQT8 1826 aa30.61■■■□□ 2.49
SMARCC2-204ENST00000547356 CAMTA2O94983 1202 aa30.61■■■□□ 2.49
SMARCC2-204ENST00000547356 DZIP3Q86Y13 1208 aaKnown RBP30.61■■■□□ 2.49
SMARCC2-204ENST00000547356 KIAA1551Q9HCM1 1747 aa30.61■■■□□ 2.49
SMARCC2-204ENST00000547356 TBC1D9BQ66K14 1250 aa30.6■■■□□ 2.49
SMARCC2-204ENST00000547356 NPM2Q86SE8 214 aaKnown RBP30.59■■■□□ 2.49
SMARCC2-204ENST00000547356 A0A0G2JLW4 131 aa30.58■■■□□ 2.49
SMARCC2-204ENST00000547356 KRT24Q2M2I5 525 aa30.58■■■□□ 2.49
SMARCC2-204ENST00000547356 N4BP2Q86UW6 1770 aaPredicted RBP30.58■■■□□ 2.49
SMARCC2-204ENST00000547356 CHL1O00533 1208 aa30.57■■■□□ 2.48
SMARCC2-204ENST00000547356 YY1P25490 414 aa30.57■■■□□ 2.48
SMARCC2-204ENST00000547356 BABAM1Q9NWV8 329 aa30.57■■■□□ 2.48
SMARCC2-204ENST00000547356 DPEP1P16444 411 aa30.56■■■□□ 2.48
SMARCC2-204ENST00000547356 NGEFQ8N5V2 710 aa30.56■■■□□ 2.48
SMARCC2-204ENST00000547356 BCORQ6W2J9 1755 aa30.56■■■□□ 2.48
SMARCC2-204ENST00000547356 AFDNP55196 1824 aaKnown RBP30.55■■■□□ 2.48
SMARCC2-204ENST00000547356 SERPINB2P05120 415 aa30.55■■■□□ 2.48
SMARCC2-204ENST00000547356 TGFB2P61812 414 aa30.54■■■□□ 2.48
SMARCC2-204ENST00000547356 MYL6BP14649 208 aa30.53■■■□□ 2.48
SMARCC2-204ENST00000547356 EIF2S2P20042 333 aaKnown RBP30.53■■■□□ 2.48
SMARCC2-204ENST00000547356 NRXN2Q9P2S2 1712 aa30.52■■■□□ 2.48
SMARCC2-204ENST00000547356 UTRNP46939 3433 aa30.52■■■□□ 2.48
SMARCC2-204ENST00000547356 CARMIL3Q8ND23 1372 aa30.52■■■□□ 2.48
SMARCC2-204ENST00000547356 NECTIN2Q92692 538 aa30.51■■■□□ 2.47
SMARCC2-204ENST00000547356 CHRNA5P30532 468 aa30.5■■■□□ 2.47
SMARCC2-204ENST00000547356 CCDC24Q8N4L8 307 aa30.5■■■□□ 2.47
SMARCC2-204ENST00000547356 KCNA3P22001 575 aa30.49■■■□□ 2.47
SMARCC2-204ENST00000547356 CFAP44Q96MT7 982 aa30.49■■■□□ 2.47
SMARCC2-204ENST00000547356 MBIPQ9NS73 344 aa30.49■■■□□ 2.47
SMARCC2-204ENST00000547356 GOLGB1Q14789 3259 aaKnown RBP30.48■■■□□ 2.47
SMARCC2-204ENST00000547356 GRIN3BO60391 1043 aa30.48■■■□□ 2.47
SMARCC2-204ENST00000547356 ANXA1P04083 346 aa30.48■■■□□ 2.47
SMARCC2-204ENST00000547356 HLFQ16534 295 aa30.48■■■□□ 2.47
SMARCC2-204ENST00000547356 PROSER3Q2NL68 480 aa30.48■■■□□ 2.47
SMARCC2-204ENST00000547356 TTLL7Q6ZT98 887 aa30.48■■■□□ 2.47
SMARCC2-204ENST00000547356 ZNF853P0CG23 659 aa30.46■■■□□ 2.47
SMARCC2-204ENST00000547356 PDIA6Q15084 440 aa30.46■■■□□ 2.47
SMARCC2-204ENST00000547356 SETDB2Q96T68 719 aa30.46■■■□□ 2.47
SMARCC2-204ENST00000547356 BCS1LQ9Y276 419 aa30.46■■■□□ 2.47
SMARCC2-204ENST00000547356 PRR5LQ6MZQ0 368 aa30.44■■■□□ 2.46
SMARCC2-204ENST00000547356 LRP10Q7Z4F1 713 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms