RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 A0A087WZG4 1122 aa33.2■■■□□ 2.91
NKX2-1-205ENST00000546983 FAM9BQ8IZU0 186 aa33.2■■■□□ 2.91
NKX2-1-205ENST00000546983 CFAP44Q96MT7 982 aa33.2■■■□□ 2.91
NKX2-1-205ENST00000546983 ATF5Q9Y2D1 282 aaPredicted RBP33.2■■■□□ 2.91
NKX2-1-205ENST00000546983 UBR3Q6ZT12 1888 aa33.2■■■□□ 2.9
NKX2-1-205ENST00000546983 KCNQ3O43525 872 aa33.19■■■□□ 2.9
NKX2-1-205ENST00000546983 EIF4A1P60842 406 aaKnown RBP33.19■■■□□ 2.9
NKX2-1-205ENST00000546983 CHL1O00533 1208 aa33.18■■■□□ 2.9
NKX2-1-205ENST00000546983 MIS18AQ9NYP9 233 aa33.18■■■□□ 2.9
NKX2-1-205ENST00000546983 GNAI1P63096 354 aa33.17■■■□□ 2.9
NKX2-1-205ENST00000546983 NLGN1Q8N2Q7 840 aa33.17■■■□□ 2.9
NKX2-1-205ENST00000546983 ARHGEF1Q92888 912 aaKnown RBP33.17■■■□□ 2.9
NKX2-1-205ENST00000546983 TUBGCP6Q96RT7 1819 aa33.16■■■□□ 2.9
NKX2-1-205ENST00000546983 SOS1Q07889 1333 aaPredicted RBP33.16■■■□□ 2.9
NKX2-1-205ENST00000546983 IL6STP40189 918 aaPredicted RBP33.15■■■□□ 2.9
NKX2-1-205ENST00000546983 PTGER2P43116 358 aa33.15■■■□□ 2.9
NKX2-1-205ENST00000546983 CHMP4AQ9BY43 222 aa33.15■■■□□ 2.9
NKX2-1-205ENST00000546983 IFT57Q9NWB7 429 aa33.15■■■□□ 2.9
NKX2-1-205ENST00000546983 GIGYF1O75420 1035 aaPredicted RBP33.14■■■□□ 2.9
NKX2-1-205ENST00000546983 ZPR1O75312 459 aa33.13■■■□□ 2.89
NKX2-1-205ENST00000546983 SGIP1Q9BQI5 828 aa33.13■■■□□ 2.89
NKX2-1-205ENST00000546983 ZBTB1Q9Y2K1 713 aa33.13■■■□□ 2.89
NKX2-1-205ENST00000546983 KDM3BQ7LBC6 1761 aa33.13■■■□□ 2.89
NKX2-1-205ENST00000546983 ERBB4Q15303 1308 aa33.11■■■□□ 2.89
NKX2-1-205ENST00000546983 AMIGO3Q86WK7 504 aa33.11■■■□□ 2.89
NKX2-1-205ENST00000546983 ARXQ96QS3 562 aa33.11■■■□□ 2.89
NKX2-1-205ENST00000546983 LAS1LQ9Y4W2 734 aaKnown RBP33.11■■■□□ 2.89
NKX2-1-205ENST00000546983 USP16Q9Y5T5 823 aa33.11■■■□□ 2.89
NKX2-1-205ENST00000546983 COL15A1P39059 1388 aa33.1■■■□□ 2.89
NKX2-1-205ENST00000546983 HOXB7P09629 217 aa33.1■■■□□ 2.89
NKX2-1-205ENST00000546983 CANXP27824 592 aaKnown RBP33.1■■■□□ 2.89
NKX2-1-205ENST00000546983 EIF5P55010 431 aaKnown RBP33.1■■■□□ 2.89
NKX2-1-205ENST00000546983 IL16Q14005 1332 aa33.09■■■□□ 2.89
NKX2-1-205ENST00000546983 WWC1Q8IX03 1113 aa33.09■■■□□ 2.89
NKX2-1-205ENST00000546983 USP42Q9H9J4 1324 aaKnown RBP33.08■■■□□ 2.89
NKX2-1-205ENST00000546983 NARFQ9UHQ1 456 aa33.08■■■□□ 2.89
NKX2-1-205ENST00000546983 MYH14Q7Z406 1995 aaKnown RBP33.08■■■□□ 2.89
NKX2-1-205ENST00000546983 ZNF853P0CG23 659 aa33.07■■■□□ 2.88
NKX2-1-205ENST00000546983 WDR63Q8IWG1 891 aa33.07■■■□□ 2.88
NKX2-1-205ENST00000546983 RGL2O15211 777 aa33.06■■■□□ 2.88
NKX2-1-205ENST00000546983 COL24A1Q17RW2 1714 aa33.05■■■□□ 2.88
NKX2-1-205ENST00000546983 A1BGP04217 495 aa33.05■■■□□ 2.88
NKX2-1-205ENST00000546983 GYS1P13807 737 aa33.04■■■□□ 2.88
NKX2-1-205ENST00000546983 MSL1Q68DK7 614 aa33.02■■■□□ 2.88
NKX2-1-205ENST00000546983 MBIPQ9NS73 344 aa33.01■■■□□ 2.87
NKX2-1-205ENST00000546983 PRAMEF22A3QJZ6 481 aa33■■■□□ 2.87
NKX2-1-205ENST00000546983 SMIM5Q71RC9 77 aa33■■■□□ 2.87
NKX2-1-205ENST00000546983 LAMB4A4D0S4 1761 aa32.99■■■□□ 2.87
NKX2-1-205ENST00000546983 ZNF330Q9Y3S2 320 aaPredicted RBP32.99■■■□□ 2.87
NKX2-1-205ENST00000546983 ZNF652Q9Y2D9 606 aa32.98■■■□□ 2.87
NKX2-1-205ENST00000546983 PARP3Q9Y6F1 533 aa32.98■■■□□ 2.87
NKX2-1-205ENST00000546983 SRCAPQ6ZRS2 3230 aa32.98■■■□□ 2.87
NKX2-1-205ENST00000546983 USPL1Q5W0Q7 1092 aa32.97■■■□□ 2.87
NKX2-1-205ENST00000546983 MMP10P09238 476 aa32.96■■■□□ 2.87
NKX2-1-205ENST00000546983 CLEC4GQ6UXB4 293 aa32.96■■■□□ 2.87
NKX2-1-205ENST00000546983 DZIP3Q86Y13 1208 aaKnown RBP32.96■■■□□ 2.87
NKX2-1-205ENST00000546983 C4AP0C0L4 1744 aa32.95■■■□□ 2.87
NKX2-1-205ENST00000546983 DCAF8L1A6NGE4 600 aa32.95■■■□□ 2.87
NKX2-1-205ENST00000546983 MIER1Q8N108 512 aa32.95■■■□□ 2.87
NKX2-1-205ENST00000546983 SRP68Q9UHB9 627 aaKnown RBP32.95■■■□□ 2.87
NKX2-1-205ENST00000546983 CD2APQ9Y5K6 639 aa32.95■■■□□ 2.87
NKX2-1-205ENST00000546983 NBPF26B4DH59 902 aa32.93■■■□□ 2.86
NKX2-1-205ENST00000546983 NBPF10Q6P3W6 841 aaKnown RBP32.93■■■□□ 2.86
NKX2-1-205ENST00000546983 NBPF15Q8N660 670 aa32.93■■■□□ 2.86
NKX2-1-205ENST00000546983 FHDC1Q9C0D6 1143 aaPredicted RBP32.93■■■□□ 2.86
NKX2-1-205ENST00000546983 EIF2S2P20042 333 aaKnown RBP32.92■■■□□ 2.86
NKX2-1-205ENST00000546983 DUSP27Q5VZP5 1158 aa32.92■■■□□ 2.86
NKX2-1-205ENST00000546983 SYT17Q9BSW7 474 aa32.92■■■□□ 2.86
NKX2-1-205ENST00000546983 MYH16Q9H6N6 1097 aa32.92■■■□□ 2.86
NKX2-1-205ENST00000546983 FKBP8Q14318 412 aa32.91■■■□□ 2.86
NKX2-1-205ENST00000546983 HDGFL1Q5TGJ6 251 aa32.91■■■□□ 2.86
NKX2-1-205ENST00000546983 TBC1D2BQ9UPU7 963 aa32.91■■■□□ 2.86
NKX2-1-205ENST00000546983 ERVV-1B6SEH8 477 aa32.9■■■□□ 2.86
NKX2-1-205ENST00000546983 KIF6Q6ZMV9 814 aa32.9■■■□□ 2.86
NKX2-1-205ENST00000546983 TM4SF1P30408 202 aa32.89■■■□□ 2.86
NKX2-1-205ENST00000546983 DDX21Q9NR30 783 aaKnown RBP eCLIP32.89■■■□□ 2.86
NKX2-1-205ENST00000546983 DBF4Q9UBU7 674 aaPredicted RBP32.89■■■□□ 2.86
NKX2-1-205ENST00000546983 SALL2Q9Y467 1007 aaPredicted RBP32.89■■■□□ 2.86
NKX2-1-205ENST00000546983 CAMTA2O94983 1202 aa32.88■■■□□ 2.85
NKX2-1-205ENST00000546983 GOLGA2Q08379 1002 aa32.87■■■□□ 2.85
NKX2-1-205ENST00000546983 MYL6BP14649 208 aa32.85■■■□□ 2.85
NKX2-1-205ENST00000546983 KLHL34Q8N239 644 aa32.85■■■□□ 2.85
NKX2-1-205ENST00000546983 BCL2L12Q9HB09 334 aa32.85■■■□□ 2.85
NKX2-1-205ENST00000546983 HYPKQ9NX55 129 aa32.85■■■□□ 2.85
NKX2-1-205ENST00000546983 PIP4K2AP48426 406 aaPredicted RBP32.84■■■□□ 2.85
NKX2-1-205ENST00000546983 CCDC30Q5VVM6 783 aa32.84■■■□□ 2.85
NKX2-1-205ENST00000546983 SETDB2Q96T68 719 aa32.84■■■□□ 2.85
NKX2-1-205ENST00000546983 NFIXQ14938 502 aa32.83■■■□□ 2.85
NKX2-1-205ENST00000546983 MAP3K15Q6ZN16 1313 aa32.82■■■□□ 2.84
NKX2-1-205ENST00000546983 POLRMTO00411 1230 aaKnown RBP32.82■■■□□ 2.84
NKX2-1-205ENST00000546983 CARMIL3Q8ND23 1372 aa32.82■■■□□ 2.84
NKX2-1-205ENST00000546983 SCN7AQ01118 1682 aa32.82■■■□□ 2.84
NKX2-1-205ENST00000546983 ZNF521Q96K83 1311 aa32.81■■■□□ 2.84
NKX2-1-205ENST00000546983 TGFB2P61812 414 aa32.81■■■□□ 2.84
NKX2-1-205ENST00000546983 PDIA6Q15084 440 aa32.81■■■□□ 2.84
NKX2-1-205ENST00000546983 KRT24Q2M2I5 525 aa32.81■■■□□ 2.84
NKX2-1-205ENST00000546983 TSR2Q969E8 191 aaKnown RBP32.8■■■□□ 2.84
NKX2-1-205ENST00000546983 FANCIQ9NVI1 1328 aa32.79■■■□□ 2.84
NKX2-1-205ENST00000546983 E9PSI1 815 aa32.78■■■□□ 2.84
NKX2-1-205ENST00000546983 SERPINB2P05120 415 aa32.78■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms