RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 MBIPQ9NS73 344 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 SERTAD1Q9UHV2 236 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 GRIN2BQ13224 1484 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 BACH1O14867 736 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 GTF2IP78347 998 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 MAP3K10Q02779 954 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 NCOA4Q13772 614 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 EFHC2Q5JST6 749 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 PHF24Q9UPV7 400 aa11.45□□□□□ -0.58
CHPT1-203ENST00000546873 GAS6Q14393 721 aa11.44□□□□□ -0.58
CHPT1-203ENST00000546873 LBRQ14739 615 aaKnown RBP11.44□□□□□ -0.58
CHPT1-203ENST00000546873 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
CHPT1-203ENST00000546873 PCDHGA11Q9Y5H2 935 aa11.44□□□□□ -0.58
CHPT1-203ENST00000546873 MSX1P28360 303 aa11.43□□□□□ -0.58
CHPT1-203ENST00000546873 PLA2G4AP47712 749 aa11.43□□□□□ -0.58
CHPT1-203ENST00000546873 DEPDC4Q8N2C3 294 aa11.43□□□□□ -0.58
CHPT1-203ENST00000546873 CLUAP1Q96AJ1 413 aa11.43□□□□□ -0.58
CHPT1-203ENST00000546873 MX2P20592 715 aa11.42□□□□□ -0.58
CHPT1-203ENST00000546873 ZNF385CQ66K41 422 aaPredicted RBP11.42□□□□□ -0.58
CHPT1-203ENST00000546873 AIDAQ96BJ3 306 aa11.42□□□□□ -0.58
CHPT1-203ENST00000546873 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
CHPT1-203ENST00000546873 A6NJY4 79 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 TMEM229AB2RXF0 380 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 ATP1A2P50993 1020 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 FAM69CQ0P6D2 419 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 SLC4A9Q96Q91 983 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 CFHR5Q9BXR6 569 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 RUBCNLQ9H714 662 aa11.41□□□□□ -0.58
CHPT1-203ENST00000546873 WDR97A6NE52 1622 aa11.4□□□□□ -0.58
CHPT1-203ENST00000546873 CDK2AP1O14519 115 aa11.4□□□□□ -0.58
CHPT1-203ENST00000546873 NBPF1Q3BBV0 1214 aa11.4□□□□□ -0.58
CHPT1-203ENST00000546873 ENAMQ9NRM1 1142 aa11.4□□□□□ -0.58
CHPT1-203ENST00000546873 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
CHPT1-203ENST00000546873 IGF1RP08069 1367 aa11.4□□□□□ -0.59
CHPT1-203ENST00000546873 USP17L3A6NCW0 530 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 USP17L4A6NCW7 530 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 RNF225M0QZC1 329 aaPredicted RBP11.39□□□□□ -0.59
CHPT1-203ENST00000546873 ATP9BO43861 1147 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 CEP170Q5SW79 1584 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 USP17L1Q7RTZ2 530 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 PLEKHM2Q8IWE5 1019 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 ADAMTS8Q9UP79 889 aa11.39□□□□□ -0.59
CHPT1-203ENST00000546873 TATP17735 454 aaPredicted RBP11.38□□□□□ -0.59
CHPT1-203ENST00000546873 MARSP56192 900 aaKnown RBP11.38□□□□□ -0.59
CHPT1-203ENST00000546873 WHAMMQ8TF30 809 aa11.38□□□□□ -0.59
CHPT1-203ENST00000546873 CABP1Q9NZU7 370 aa11.38□□□□□ -0.59
CHPT1-203ENST00000546873 KDM6BO15054 1643 aa11.38□□□□□ -0.59
CHPT1-203ENST00000546873 HECW2Q9P2P5 1572 aa11.37□□□□□ -0.59
CHPT1-203ENST00000546873 WRNQ14191 1432 aaPredicted RBP eCLIP11.37□□□□□ -0.59
CHPT1-203ENST00000546873 MTFR1Q15390 333 aa11.37□□□□□ -0.59
CHPT1-203ENST00000546873 FIGNL1Q6PIW4 674 aa11.37□□□□□ -0.59
CHPT1-203ENST00000546873 MAP2K3P46734 347 aa11.36□□□□□ -0.59
CHPT1-203ENST00000546873 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHPT1-203ENST00000546873 GLMNQ92990 594 aa11.36□□□□□ -0.59
CHPT1-203ENST00000546873 CRISPLD1Q9H336 500 aa11.36□□□□□ -0.59
CHPT1-203ENST00000546873 ZNF358Q9NW07 568 aa11.36□□□□□ -0.59
CHPT1-203ENST00000546873 ABCC10Q5T3U5 1492 aa11.36□□□□□ -0.59
CHPT1-203ENST00000546873 A6NJR5 290 aa11.35□□□□□ -0.59
CHPT1-203ENST00000546873 ARSJQ5FYB0 599 aaPredicted RBP11.35□□□□□ -0.59
CHPT1-203ENST00000546873 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
CHPT1-203ENST00000546873 TPCN2Q8NHX9 752 aa11.35□□□□□ -0.59
CHPT1-203ENST00000546873 DNAAF2Q9NVR5 837 aaKnown RBP11.35□□□□□ -0.59
CHPT1-203ENST00000546873 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
CHPT1-203ENST00000546873 CELA2BP08218 269 aaPredicted RBP11.34□□□□□ -0.59
CHPT1-203ENST00000546873 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
CHPT1-203ENST00000546873 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
CHPT1-203ENST00000546873 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
CHPT1-203ENST00000546873 ATXN7L1Q9ULK2 861 aaPredicted RBP11.34□□□□□ -0.59
CHPT1-203ENST00000546873 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
CHPT1-203ENST00000546873 ADGRL1O94910 1474 aa11.33□□□□□ -0.6
CHPT1-203ENST00000546873 ZDHHC3Q9NYG2 299 aa11.33□□□□□ -0.6
CHPT1-203ENST00000546873 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
CHPT1-203ENST00000546873 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
CHPT1-203ENST00000546873 IQSEC3Q9UPP2 1182 aaPredicted RBP11.33□□□□□ -0.6
CHPT1-203ENST00000546873 CUX1P39880 1505 aa11.33□□□□□ -0.6
CHPT1-203ENST00000546873 DIP2BQ9P265 1576 aa11.33□□□□□ -0.6
CHPT1-203ENST00000546873 ARHGEF15O94989 841 aa11.32□□□□□ -0.6
CHPT1-203ENST00000546873 BCRP11274 1271 aa11.32□□□□□ -0.6
CHPT1-203ENST00000546873 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
CHPT1-203ENST00000546873 NLRP8Q86W28 1048 aa11.32□□□□□ -0.6
CHPT1-203ENST00000546873 SCARF2Q96GP6 870 aaPredicted RBP11.32□□□□□ -0.6
CHPT1-203ENST00000546873 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
CHPT1-203ENST00000546873 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
CHPT1-203ENST00000546873 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 LARGE2Q8N3Y3 721 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 OGFOD1Q8N543 542 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 NEDD1Q8NHV4 660 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
CHPT1-203ENST00000546873 NUP160Q12769 1436 aa11.3□□□□□ -0.6
CHPT1-203ENST00000546873 EEA1Q15075 1411 aa11.3□□□□□ -0.6
CHPT1-203ENST00000546873 ATP4AP20648 1035 aa11.3□□□□□ -0.6
CHPT1-203ENST00000546873 KCNMA1Q12791 1236 aa11.3□□□□□ -0.6
CHPT1-203ENST00000546873 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms