RNA–Protein interactions for RNA: ENST00000546546.1

NOVA1-207, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-207ENST00000546546 MRS2Q9HD23 443 aa17.15■□□□□ 0.34
NOVA1-207ENST00000546546 QSER1Q2KHR3 1735 aa17.14■□□□□ 0.33
NOVA1-207ENST00000546546 ZPR1O75312 459 aa17.14■□□□□ 0.33
NOVA1-207ENST00000546546 MMP10P09238 476 aa17.14■□□□□ 0.33
NOVA1-207ENST00000546546 SNRPA1P09661 255 aaKnown RBP17.14■□□□□ 0.33
NOVA1-207ENST00000546546 GYS1P13807 737 aa17.14■□□□□ 0.33
NOVA1-207ENST00000546546 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
NOVA1-207ENST00000546546 LMOD3Q0VAK6 560 aa17.14■□□□□ 0.33
NOVA1-207ENST00000546546 NLGN1Q8N2Q7 840 aa17.14■□□□□ 0.33
NOVA1-207ENST00000546546 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
NOVA1-207ENST00000546546 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
NOVA1-207ENST00000546546 SOS1Q07889 1333 aaPredicted RBP17.14■□□□□ 0.33
NOVA1-207ENST00000546546 APAF1O14727 1248 aa17.13■□□□□ 0.33
NOVA1-207ENST00000546546 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
NOVA1-207ENST00000546546 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
NOVA1-207ENST00000546546 TSPYL4Q9UJ04 414 aa17.13■□□□□ 0.33
NOVA1-207ENST00000546546 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
NOVA1-207ENST00000546546 FKBP8Q14318 412 aa17.12■□□□□ 0.33
NOVA1-207ENST00000546546 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
NOVA1-207ENST00000546546 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
NOVA1-207ENST00000546546 TJP1Q07157 1748 aa17.12■□□□□ 0.33
NOVA1-207ENST00000546546 ZNF831Q5JPB2 1677 aa17.11■□□□□ 0.33
NOVA1-207ENST00000546546 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
NOVA1-207ENST00000546546 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
NOVA1-207ENST00000546546 EIF4A1P60842 406 aaKnown RBP17.1■□□□□ 0.33
NOVA1-207ENST00000546546 TBC1D2BQ9UPU7 963 aa17.1■□□□□ 0.33
NOVA1-207ENST00000546546 PARP3Q9Y6F1 533 aa17.1■□□□□ 0.33
NOVA1-207ENST00000546546 COL15A1P39059 1388 aa17.1■□□□□ 0.33
NOVA1-207ENST00000546546 COL5A3P25940 1745 aaPredicted RBP17.1■□□□□ 0.33
NOVA1-207ENST00000546546 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
NOVA1-207ENST00000546546 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
NOVA1-207ENST00000546546 VIRMAQ69YN4 1812 aaKnown RBP17.09■□□□□ 0.33
NOVA1-207ENST00000546546 A0A087WZG4 1122 aa17.08■□□□□ 0.32
NOVA1-207ENST00000546546 GPR162Q16538 588 aa17.08■□□□□ 0.32
NOVA1-207ENST00000546546 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.32
NOVA1-207ENST00000546546 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
NOVA1-207ENST00000546546 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
NOVA1-207ENST00000546546 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
NOVA1-207ENST00000546546 BICDL1Q6ZP65 573 aa17.07■□□□□ 0.32
NOVA1-207ENST00000546546 CD2APQ9Y5K6 639 aa17.07■□□□□ 0.32
NOVA1-207ENST00000546546 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
NOVA1-207ENST00000546546 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
NOVA1-207ENST00000546546 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
NOVA1-207ENST00000546546 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
NOVA1-207ENST00000546546 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
NOVA1-207ENST00000546546 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
NOVA1-207ENST00000546546 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
NOVA1-207ENST00000546546 TM4SF1P30408 202 aa17.04■□□□□ 0.32
NOVA1-207ENST00000546546 DDR1Q08345 913 aa17.04■□□□□ 0.32
NOVA1-207ENST00000546546 NFIXQ14938 502 aa17.04■□□□□ 0.32
NOVA1-207ENST00000546546 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
NOVA1-207ENST00000546546 DZIP3Q86Y13 1208 aaKnown RBP17.04■□□□□ 0.32
NOVA1-207ENST00000546546 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
NOVA1-207ENST00000546546 NECTIN2Q92692 538 aa17.04■□□□□ 0.32
NOVA1-207ENST00000546546 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
NOVA1-207ENST00000546546 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
NOVA1-207ENST00000546546 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
NOVA1-207ENST00000546546 CHL1O00533 1208 aa17.03■□□□□ 0.32
NOVA1-207ENST00000546546 MYL6BP14649 208 aa17.03■□□□□ 0.32
NOVA1-207ENST00000546546 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
NOVA1-207ENST00000546546 POLRMTO00411 1230 aaKnown RBP17.02■□□□□ 0.32
NOVA1-207ENST00000546546 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
NOVA1-207ENST00000546546 TBC1D9BQ66K14 1250 aa17.02■□□□□ 0.32
NOVA1-207ENST00000546546 A0A0G2JLW4 131 aa17.01■□□□□ 0.31
NOVA1-207ENST00000546546 CAMTA2O94983 1202 aa17.01■□□□□ 0.31
NOVA1-207ENST00000546546 COL24A1Q17RW2 1714 aa17.01■□□□□ 0.31
NOVA1-207ENST00000546546 SERPINB2P05120 415 aa17■□□□□ 0.31
NOVA1-207ENST00000546546 YBX3P16989 372 aaKnown RBP eCLIP17■□□□□ 0.31
NOVA1-207ENST00000546546 CFAP44Q96MT7 982 aa17■□□□□ 0.31
NOVA1-207ENST00000546546 MBIPQ9NS73 344 aa16.99■□□□□ 0.31
NOVA1-207ENST00000546546 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
NOVA1-207ENST00000546546 ANXA1P04083 346 aa16.98■□□□□ 0.31
NOVA1-207ENST00000546546 DPEP1P16444 411 aa16.98■□□□□ 0.31
NOVA1-207ENST00000546546 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
NOVA1-207ENST00000546546 CCDC24Q8N4L8 307 aa16.98■□□□□ 0.31
NOVA1-207ENST00000546546 ELL2O00472 640 aaPredicted RBP16.97■□□□□ 0.31
NOVA1-207ENST00000546546 NPHP1O15259 732 aa16.97■□□□□ 0.31
NOVA1-207ENST00000546546 TGFB2P61812 414 aa16.97■□□□□ 0.31
NOVA1-207ENST00000546546 GNAI1P63096 354 aa16.97■□□□□ 0.31
NOVA1-207ENST00000546546 TTLL7Q6ZT98 887 aa16.97■□□□□ 0.31
NOVA1-207ENST00000546546 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
NOVA1-207ENST00000546546 FAM177BA6PVY3 158 aa16.96■□□□□ 0.31
NOVA1-207ENST00000546546 YY1P25490 414 aa16.96■□□□□ 0.31
NOVA1-207ENST00000546546 HLFQ16534 295 aa16.96■□□□□ 0.31
NOVA1-207ENST00000546546 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
NOVA1-207ENST00000546546 ZNF652Q9Y2D9 606 aa16.96■□□□□ 0.31
NOVA1-207ENST00000546546 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 CHRNA5P30532 468 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 PROSER3Q2NL68 480 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 DUSP27Q5VZP5 1158 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 BCS1LQ9Y276 419 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 C10orf71Q711Q0 1435 aa16.95■□□□□ 0.3
NOVA1-207ENST00000546546 GRIN3BO60391 1043 aa16.94■□□□□ 0.3
NOVA1-207ENST00000546546 AIMP1Q12904 312 aaKnown RBP16.94■□□□□ 0.3
NOVA1-207ENST00000546546 PDIA6Q15084 440 aa16.94■□□□□ 0.3
NOVA1-207ENST00000546546 HDGFL1Q5TGJ6 251 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms