RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 GIGYF1O75420 1035 aaPredicted RBP17.99■□□□□ 0.47
TSEN54-203ENST00000545228 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
TSEN54-203ENST00000545228 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
TSEN54-203ENST00000545228 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
TSEN54-203ENST00000545228 ASAP1Q9ULH1 1129 aa17.99■□□□□ 0.47
TSEN54-203ENST00000545228 LOC102724428A0A0B4J2F2 783 aa17.98■□□□□ 0.47
TSEN54-203ENST00000545228 SIK1P57059 783 aa17.98■□□□□ 0.47
TSEN54-203ENST00000545228 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
TSEN54-203ENST00000545228 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
TSEN54-203ENST00000545228 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
TSEN54-203ENST00000545228 PHF14O94880 888 aa17.97■□□□□ 0.47
TSEN54-203ENST00000545228 THUMPD2Q9BTF0 503 aaKnown RBP17.97■□□□□ 0.47
TSEN54-203ENST00000545228 SALL2Q9Y467 1007 aaPredicted RBP17.97■□□□□ 0.47
TSEN54-203ENST00000545228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.96■□□□□ 0.47
TSEN54-203ENST00000545228 ATP6V1AP38606 617 aa17.96■□□□□ 0.47
TSEN54-203ENST00000545228 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
TSEN54-203ENST00000545228 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.46
TSEN54-203ENST00000545228 TJP1Q07157 1748 aa17.95■□□□□ 0.46
TSEN54-203ENST00000545228 HEG1Q9ULI3 1381 aa17.95■□□□□ 0.46
TSEN54-203ENST00000545228 CHL1O00533 1208 aa17.95■□□□□ 0.46
TSEN54-203ENST00000545228 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
TSEN54-203ENST00000545228 SSFA2P28290 1259 aa17.95■□□□□ 0.46
TSEN54-203ENST00000545228 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
TSEN54-203ENST00000545228 E9PSI1 815 aa17.94■□□□□ 0.46
TSEN54-203ENST00000545228 STARD3NLO95772 234 aa17.94■□□□□ 0.46
TSEN54-203ENST00000545228 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
TSEN54-203ENST00000545228 SLC39A6Q13433 755 aa17.94■□□□□ 0.46
TSEN54-203ENST00000545228 LINC00116Q8NCU8 138 aa17.94■□□□□ 0.46
TSEN54-203ENST00000545228 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
TSEN54-203ENST00000545228 HOXB7P09629 217 aa17.93■□□□□ 0.46
TSEN54-203ENST00000545228 SMIM5Q71RC9 77 aa17.93■□□□□ 0.46
TSEN54-203ENST00000545228 CACNA1FO60840 1977 aa17.93■□□□□ 0.46
TSEN54-203ENST00000545228 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
TSEN54-203ENST00000545228 GNPATO15228 680 aa17.92■□□□□ 0.46
TSEN54-203ENST00000545228 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
TSEN54-203ENST00000545228 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
TSEN54-203ENST00000545228 ZNF521Q96K83 1311 aa17.92■□□□□ 0.46
TSEN54-203ENST00000545228 ITPK1Q13572 414 aa17.91■□□□□ 0.46
TSEN54-203ENST00000545228 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
TSEN54-203ENST00000545228 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
TSEN54-203ENST00000545228 MBIPQ9NS73 344 aa17.9■□□□□ 0.46
TSEN54-203ENST00000545228 CNTNAP4Q9C0A0 1308 aa17.9■□□□□ 0.46
TSEN54-203ENST00000545228 ATP10DQ9P241 1426 aa17.89■□□□□ 0.46
TSEN54-203ENST00000545228 RC3H1Q5TC82 1133 aaKnown RBP17.89■□□□□ 0.45
TSEN54-203ENST00000545228 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
TSEN54-203ENST00000545228 ERBB4Q15303 1308 aa17.88■□□□□ 0.45
TSEN54-203ENST00000545228 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
TSEN54-203ENST00000545228 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
TSEN54-203ENST00000545228 WWC3Q9ULE0 1092 aa17.86■□□□□ 0.45
TSEN54-203ENST00000545228 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
TSEN54-203ENST00000545228 GOLGB1Q14789 3259 aaKnown RBP17.86■□□□□ 0.45
TSEN54-203ENST00000545228 KCNQ3O43525 872 aa17.85■□□□□ 0.45
TSEN54-203ENST00000545228 ADRA2BP18089 450 aa17.85■□□□□ 0.45
TSEN54-203ENST00000545228 TRAPPC3LQ5T215 181 aa17.85■□□□□ 0.45
TSEN54-203ENST00000545228 MYH14Q7Z406 1995 aaKnown RBP17.85■□□□□ 0.45
TSEN54-203ENST00000545228 DNAJC10Q8IXB1 793 aa17.85■□□□□ 0.45
TSEN54-203ENST00000545228 CCDC87Q9NVE4 849 aa17.85■□□□□ 0.45
TSEN54-203ENST00000545228 ADCY9O60503 1353 aa17.84■□□□□ 0.45
TSEN54-203ENST00000545228 MMP10P09238 476 aa17.84■□□□□ 0.45
TSEN54-203ENST00000545228 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
TSEN54-203ENST00000545228 CRKLP46109 303 aaKnown RBP17.84■□□□□ 0.45
TSEN54-203ENST00000545228 ZNF428Q96B54 188 aa17.84■□□□□ 0.45
TSEN54-203ENST00000545228 CYP19A1P11511 503 aaPredicted RBP17.83■□□□□ 0.44
TSEN54-203ENST00000545228 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
TSEN54-203ENST00000545228 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
TSEN54-203ENST00000545228 A0A087WZG4 1122 aa17.82■□□□□ 0.44
TSEN54-203ENST00000545228 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
TSEN54-203ENST00000545228 HDGFL1Q5TGJ6 251 aa17.82■□□□□ 0.44
TSEN54-203ENST00000545228 CCDC30Q5VVM6 783 aa17.82■□□□□ 0.44
TSEN54-203ENST00000545228 DUSP27Q5VZP5 1158 aa17.82■□□□□ 0.44
TSEN54-203ENST00000545228 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
TSEN54-203ENST00000545228 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
TSEN54-203ENST00000545228 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
TSEN54-203ENST00000545228 IL6STP40189 918 aaPredicted RBP17.81■□□□□ 0.44
TSEN54-203ENST00000545228 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
TSEN54-203ENST00000545228 STK31Q9BXU1 1019 aa17.81■□□□□ 0.44
TSEN54-203ENST00000545228 TGFB2P61812 414 aa17.8■□□□□ 0.44
TSEN54-203ENST00000545228 ARHGEF1Q92888 912 aaKnown RBP17.8■□□□□ 0.44
TSEN54-203ENST00000545228 C4AP0C0L4 1744 aa17.8■□□□□ 0.44
TSEN54-203ENST00000545228 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
TSEN54-203ENST00000545228 RFC4P35249 363 aa17.79■□□□□ 0.44
TSEN54-203ENST00000545228 DBF4Q9UBU7 674 aaPredicted RBP17.79■□□□□ 0.44
TSEN54-203ENST00000545228 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
TSEN54-203ENST00000545228 COL15A1P39059 1388 aa17.79■□□□□ 0.44
TSEN54-203ENST00000545228 PXDNLA1KZ92 1463 aa17.78■□□□□ 0.44
TSEN54-203ENST00000545228 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
TSEN54-203ENST00000545228 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
TSEN54-203ENST00000545228 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
TSEN54-203ENST00000545228 DDX21Q9NR30 783 aaKnown RBP eCLIP17.77■□□□□ 0.44
TSEN54-203ENST00000545228 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
TSEN54-203ENST00000545228 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
TSEN54-203ENST00000545228 PARP3Q9Y6F1 533 aa17.77■□□□□ 0.44
TSEN54-203ENST00000545228 C10orf71Q711Q0 1435 aa17.76■□□□□ 0.43
TSEN54-203ENST00000545228 GYS1P13807 737 aa17.76■□□□□ 0.43
TSEN54-203ENST00000545228 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
TSEN54-203ENST00000545228 C8orf58Q8NAV2 365 aa17.76■□□□□ 0.43
TSEN54-203ENST00000545228 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
TSEN54-203ENST00000545228 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
TSEN54-203ENST00000545228 BCS1LQ9Y276 419 aa17.76■□□□□ 0.43
TSEN54-203ENST00000545228 SCN7AQ01118 1682 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms