RNA–Protein interactions for RNA: ENST00000545223.1

PRKAB1-208, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2

Gene PRKAB1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-208ENST00000545223 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
PRKAB1-208ENST00000545223 C5P01031 1676 aa9.38□□□□□ -0.91
PRKAB1-208ENST00000545223 LY75O60449 1722 aa9.37□□□□□ -0.91
PRKAB1-208ENST00000545223 TJP1Q07157 1748 aa9.37□□□□□ -0.91
PRKAB1-208ENST00000545223 ANXA1P04083 346 aa9.37□□□□□ -0.91
PRKAB1-208ENST00000545223 A1BGP04217 495 aa9.37□□□□□ -0.91
PRKAB1-208ENST00000545223 SNRPA1P09661 255 aaKnown RBP9.37□□□□□ -0.91
PRKAB1-208ENST00000545223 YY1P25490 414 aa9.37□□□□□ -0.91
PRKAB1-208ENST00000545223 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
PRKAB1-208ENST00000545223 NBPF26B4DH59 902 aa9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 CYP19A1P11511 503 aaPredicted RBP9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 BAG6P46379 1132 aa9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 PDIA6Q15084 440 aa9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 NBPF14Q5TI25 921 aa9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 NBPF10Q6P3W6 841 aaKnown RBP9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 INTS5Q6P9B9 1019 aaKnown RBP9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 AMIGO3Q86WK7 504 aa9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 NBPF15Q8N660 670 aa9.36□□□□□ -0.91
PRKAB1-208ENST00000545223 CANXP27824 592 aaKnown RBP9.35□□□□□ -0.91
PRKAB1-208ENST00000545223 PROSER3Q2NL68 480 aa9.35□□□□□ -0.91
PRKAB1-208ENST00000545223 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
PRKAB1-208ENST00000545223 ZBTB1Q9Y2K1 713 aa9.35□□□□□ -0.91
PRKAB1-208ENST00000545223 CHD4Q14839 1912 aa9.35□□□□□ -0.91
PRKAB1-208ENST00000545223 MYL6BP14649 208 aa9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 CRKLP46109 303 aaKnown RBP9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 SLC27A3Q5K4L6 730 aa9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 HDGFL1Q5TGJ6 251 aa9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 G2E3Q7L622 706 aa9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 SSH1Q8WYL5 1049 aa9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 PHAXQ9H814 394 aaKnown RBP9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 CHPF2Q9P2E5 772 aa9.34□□□□□ -0.91
PRKAB1-208ENST00000545223 BCAR3O75815 825 aa9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 HOXD11P31277 338 aaPredicted RBP9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 RARSP54136 660 aaKnown RBP9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 LRP10Q7Z4F1 713 aa9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 MYH14Q7Z406 1995 aaKnown RBP9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 COL5A3P25940 1745 aaPredicted RBP9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 TAF1LQ8IZX4 1826 aa9.33□□□□□ -0.92
PRKAB1-208ENST00000545223 STARD3NLO95772 234 aa9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 SLC4A2P04920 1241 aa9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 HOXB7P09629 217 aa9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 MRPL50Q8N5N7 158 aaKnown RBP9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 AKT1S1Q96B36 256 aa9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 CCDC87Q9NVE4 849 aa9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 TNNQ9UQP3 1299 aa9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 ZNF330Q9Y3S2 320 aaPredicted RBP9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
PRKAB1-208ENST00000545223 CICQ96RK0 1608 aaPredicted RBP9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 C4BP0C0L5 1744 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 GNPATO15228 680 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 RPS6KA4O75676 772 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 PHF14O94880 888 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 AIMP1Q12904 312 aaKnown RBP9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 CCDC30Q5VVM6 783 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 TTLL7Q6ZT98 887 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 PDGFDQ9GZP0 370 aaPredicted RBP9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 DDX21Q9NR30 783 aaKnown RBP eCLIP9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 RREB1Q92766 1687 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 LAMB4A4D0S4 1761 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 NUP188Q5SRE5 1749 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
PRKAB1-208ENST00000545223 RGPD3A6NKT7 1758 aaPredicted RBP9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 RGPD4Q7Z3J3 1758 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 SLC15A2Q16348 729 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 RC3H1Q5TC82 1133 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 XAGE3Q8WTP9 111 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 AK7Q96M32 723 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 ARXQ96QS3 562 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 RCAN3Q9UKA8 241 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 NOB1Q9ULX3 412 aaKnown RBP9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 TBC1D2BQ9UPU7 963 aa9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 SOS1Q07889 1333 aaPredicted RBP9.3□□□□□ -0.92
PRKAB1-208ENST00000545223 PLIN1O60240 522 aa9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 CT47B1P0C2W7 299 aaPredicted RBP9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 ALDH1L2Q3SY69 923 aa9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 COL23A1Q86Y22 540 aaPredicted RBP9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 STK31Q9BXU1 1019 aa9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 SMC4Q9NTJ3 1288 aa9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 SRP68Q9UHB9 627 aaKnown RBP9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 PNPLA7Q6ZV29 1317 aa9.29□□□□□ -0.92
PRKAB1-208ENST00000545223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 F6X3S4 739 aa9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 C1QBPQ07021 282 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 HLFQ16534 295 aa9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 TRAPPC3LQ5T215 181 aa9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 PPP4R3CPQ6ZMV5 832 aa9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 FRAT1Q92837 279 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 ZBTB3Q9H5J0 574 aa9.28□□□□□ -0.92
PRKAB1-208ENST00000545223 HYPKQ9NX55 129 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 227.9 ms