RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	GRIP2	Q9C0E4	1043 aa		7.92	□□□□□ -1.14
RAP1B-231	ENST00000544639	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.92	□□□□□ -1.14
RAP1B-231	ENST00000544639	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.92	□□□□□ -1.14
RAP1B-231	ENST00000544639	CDK2AP1	O14519	115 aa		7.91	□□□□□ -1.14
RAP1B-231	ENST00000544639	PRMT3	O60678	531 aa		7.91	□□□□□ -1.14
RAP1B-231	ENST00000544639	SLC9A9	Q8IVB4	645 aa		7.91	□□□□□ -1.14
RAP1B-231	ENST00000544639	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.91	□□□□□ -1.14
RAP1B-231	ENST00000544639	USP3	Q9Y6I4	520 aa		7.91	□□□□□ -1.14
RAP1B-231	ENST00000544639	SENP3-EIF4A1	A0A087X0R7	540 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	C21orf2	O43822	256 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	IGFBP4	P22692	258 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	ATP2B4	P23634	1241 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	SLC27A3	Q5K4L6	730 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	SV2A	Q7L0J3	742 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	ZNF295-AS1	Q8N0V1	137 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	NBPF15	Q8N660	670 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	PRIMPOL	Q96LW4	560 aa		7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.9	□□□□□ -1.14
RAP1B-231	ENST00000544639	SLURP2	P0DP57	97 aa		7.89	□□□□□ -1.15
RAP1B-231	ENST00000544639	SSFA2	P28290	1259 aa		7.89	□□□□□ -1.15
RAP1B-231	ENST00000544639	TBCEL	Q5QJ74	424 aa		7.89	□□□□□ -1.15
RAP1B-231	ENST00000544639	PHLDB3	Q6NSJ2	640 aa		7.89	□□□□□ -1.15
RAP1B-231	ENST00000544639	SCG3	Q8WXD2	468 aa	Known RBP	7.89	□□□□□ -1.15
RAP1B-231	ENST00000544639	ATAD2	Q6PL18	1390 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	SPATA31C2	B4DYI2	1134 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	BRD1	O95696	1058 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	RNFT1	Q5M7Z0	435 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	B4GALNT3	Q6L9W6	998 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	TMEM214	Q6NUQ4	689 aa	Known RBP	7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	LYSMD3	Q7Z3D4	306 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	VWA5B2	Q8N398	1253 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	GAS2L2	Q8NHY3	880 aa		7.88	□□□□□ -1.15
RAP1B-231	ENST00000544639	CDC14C	A4D256	554 aa		7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	RNF225	M0QZC1	329 aa	Predicted RBP	7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	PPP1R12B	O60237	982 aa	Predicted RBP	7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	GSK3A	P49840	483 aa		7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	POTEA	Q6S8J7	498 aa		7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	STAG2	Q8N3U4	1231 aa		7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	C1orf216	Q8TAB5	229 aa		7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	RHBDD1	Q8TEB9	315 aa		7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	ADAMTS8	Q9UP79	889 aa		7.87	□□□□□ -1.15
RAP1B-231	ENST00000544639	FOXO3	O43524	673 aa		7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	GTF2E1	P29083	439 aa	Predicted RBP	7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	PSMA6	P60900	246 aa	Known RBP	7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	FKBP5	Q13451	457 aa	Predicted RBP	7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	GNAS	Q5JWF2	1037 aa		7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	ZNF385C	Q66K41	422 aa	Predicted RBP	7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	PRICKLE2	Q7Z3G6	844 aa		7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	ZDHHC1	Q8WTX9	485 aa		7.86	□□□□□ -1.15
RAP1B-231	ENST00000544639	TEAD4	Q15561	434 aa		7.85	□□□□□ -1.15
RAP1B-231	ENST00000544639	C4orf17	Q53FE4	359 aa		7.85	□□□□□ -1.15
RAP1B-231	ENST00000544639	TAS1R3	Q7RTX0	852 aa		7.85	□□□□□ -1.15
RAP1B-231	ENST00000544639	GMCL1	Q96IK5	515 aa		7.85	□□□□□ -1.15
RAP1B-231	ENST00000544639	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.85	□□□□□ -1.15
RAP1B-231	ENST00000544639	NIFK	Q9BYG3	293 aa	Known RBP	7.85	□□□□□ -1.15
RAP1B-231	ENST00000544639	CABP1	Q9NZU7	370 aa		7.85	□□□□□ -1.15
RAP1B-231	ENST00000544639	EML1	O00423	815 aa		7.84	□□□□□ -1.15
RAP1B-231	ENST00000544639	HIRA	P54198	1017 aa	Predicted RBP	7.84	□□□□□ -1.15
RAP1B-231	ENST00000544639	POU4F2	Q12837	409 aa		7.84	□□□□□ -1.15
RAP1B-231	ENST00000544639	NBPF10	Q6P3W6	841 aa	Known RBP	7.84	□□□□□ -1.15
RAP1B-231	ENST00000544639	SVOP	Q8N4V2	548 aa		7.84	□□□□□ -1.15
RAP1B-231	ENST00000544639	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.84	□□□□□ -1.15
RAP1B-231	ENST00000544639	SERTM1	A2A2V5	107 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	NOS2	P35228	1153 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	SCNN1A	P37088	669 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	PLA2G4A	P47712	749 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	KCNA1	Q09470	495 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	WDR44	Q5JSH3	913 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	SH3PXD2A	Q5TCZ1	1133 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	KCTD17	Q8N5Z5	321 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	L3MBTL2	Q969R5	705 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	CHMP3	Q9Y3E7	222 aa		7.83	□□□□□ -1.16
RAP1B-231	ENST00000544639	ARHGEF15	O94989	841 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	RHOQ	P17081	205 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	PHKA2	P46019	1235 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	SRSF11	Q05519	484 aa	Known RBP	7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	TMEM151A	Q8N4L1	468 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	COL26A1	Q96A83	441 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	MKNK1	Q9BUB5	465 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	ZNF232	Q9UNY5	417 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	PARP3	Q9Y6F1	533 aa		7.82	□□□□□ -1.16
RAP1B-231	ENST00000544639	PTCD1	O75127	700 aa	Known RBP	7.81	□□□□□ -1.16
RAP1B-231	ENST00000544639	RASSF7	Q02833	373 aa		7.81	□□□□□ -1.16
RAP1B-231	ENST00000544639	CAPN12	Q6ZSI9	719 aa		7.81	□□□□□ -1.16
RAP1B-231	ENST00000544639	TXNDC2	Q86VQ3	553 aa		7.81	□□□□□ -1.16
RAP1B-231	ENST00000544639	AEBP1	Q8IUX7	1158 aa		7.81	□□□□□ -1.16
RAP1B-231	ENST00000544639	TRIM22	Q8IYM9	498 aa		7.81	□□□□□ -1.16
RAP1B-231	ENST00000544639	GDF11	O95390	407 aa		7.8	□□□□□ -1.16
RAP1B-231	ENST00000544639	ADAMTS2	O95450	1211 aa		7.8	□□□□□ -1.16
RAP1B-231	ENST00000544639	WHAMM	Q8TF30	809 aa		7.8	□□□□□ -1.16
RAP1B-231	ENST00000544639	VTI1A	Q96AJ9	217 aa		7.8	□□□□□ -1.16
RAP1B-231	ENST00000544639	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.8	□□□□□ -1.16
RAP1B-231	ENST00000544639	GNE	Q9Y223	722 aa	Known RBP	7.8	□□□□□ -1.16
RAP1B-231	ENST00000544639	PATL2	C9JE40	543 aa	Known RBP	7.79	□□□□□ -1.16
RAP1B-231	ENST00000544639	ARID4A	P29374	1257 aa	Predicted RBP	7.79	□□□□□ -1.16
RAP1B-231	ENST00000544639	TXLNA	P40222	546 aa		7.79	□□□□□ -1.16
RAP1B-231	ENST00000544639	GAS6	Q14393	721 aa		7.79	□□□□□ -1.16
RAP1B-231	ENST00000544639	TIMMDC1	Q9NPL8	285 aa		7.79	□□□□□ -1.16
RAP1B-231	ENST00000544639	ZDHHC3	Q9NYG2	299 aa		7.79	□□□□□ -1.16

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