RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 NOVA2Q9UNW9 492 aaKnown RBP9.13□□□□□ -0.95
CPSF7-222ENST00000544585 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
CPSF7-222ENST00000544585 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.12□□□□□ -0.95
CPSF7-222ENST00000544585 ZNF326Q5BKZ1 582 aaKnown RBP9.12□□□□□ -0.95
CPSF7-222ENST00000544585 TMEM164Q5U3C3 297 aa9.12□□□□□ -0.95
CPSF7-222ENST00000544585 RNF19BQ6ZMZ0 732 aa9.12□□□□□ -0.95
CPSF7-222ENST00000544585 MRPL50Q8N5N7 158 aaKnown RBP9.12□□□□□ -0.95
CPSF7-222ENST00000544585 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
CPSF7-222ENST00000544585 SHPRHQ149N8 1683 aa9.12□□□□□ -0.95
CPSF7-222ENST00000544585 PTPRUQ92729 1446 aa9.12□□□□□ -0.95
CPSF7-222ENST00000544585 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
CPSF7-222ENST00000544585 ADGRL2O95490 1459 aa9.11□□□□□ -0.95
CPSF7-222ENST00000544585 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
CPSF7-222ENST00000544585 BLOC1S3Q6QNY0 202 aa9.11□□□□□ -0.95
CPSF7-222ENST00000544585 PLEKHM2Q8IWE5 1019 aa9.11□□□□□ -0.95
CPSF7-222ENST00000544585 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
CPSF7-222ENST00000544585 DDX17Q92841 729 aaKnown RBP9.11□□□□□ -0.95
CPSF7-222ENST00000544585 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-222ENST00000544585 ZMIZ1Q9ULJ6 1067 aa9.11□□□□□ -0.95
CPSF7-222ENST00000544585 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-222ENST00000544585 SOS2Q07890 1332 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-222ENST00000544585 TMEM131LA2VDJ0 1609 aa9.1□□□□□ -0.95
CPSF7-222ENST00000544585 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-222ENST00000544585 RGS12O14924 1447 aa9.1□□□□□ -0.95
CPSF7-222ENST00000544585 MST1RQ04912 1400 aa9.1□□□□□ -0.95
CPSF7-222ENST00000544585 DIP2AQ14689 1571 aa9.1□□□□□ -0.95
CPSF7-222ENST00000544585 TRPM2O94759 1503 aa9.1□□□□□ -0.95
CPSF7-222ENST00000544585 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-222ENST00000544585 F12P00748 615 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-222ENST00000544585 CTHP32929 405 aa9.09□□□□□ -0.95
CPSF7-222ENST00000544585 PTPRNQ16849 979 aa9.09□□□□□ -0.95
CPSF7-222ENST00000544585 SLFNL1Q499Z3 407 aa9.09□□□□□ -0.95
CPSF7-222ENST00000544585 LARP1Q6PKG0 1096 aaKnown RBP9.09□□□□□ -0.95
CPSF7-222ENST00000544585 BRICD5Q6PL45 260 aa9.09□□□□□ -0.95
CPSF7-222ENST00000544585 MAP10Q9P2G4 905 aa9.09□□□□□ -0.95
CPSF7-222ENST00000544585 FAM196BA6NMK8 535 aa9.08□□□□□ -0.96
CPSF7-222ENST00000544585 JUNDP17535 347 aa9.08□□□□□ -0.96
CPSF7-222ENST00000544585 DEPDC4Q8N2C3 294 aa9.08□□□□□ -0.96
CPSF7-222ENST00000544585 ORAI2Q96SN7 254 aa9.08□□□□□ -0.96
CPSF7-222ENST00000544585 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
CPSF7-222ENST00000544585 ASXL1Q8IXJ9 1541 aa9.08□□□□□ -0.96
CPSF7-222ENST00000544585 NUP155O75694 1391 aa9.08□□□□□ -0.96
CPSF7-222ENST00000544585 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L15C9J2P7 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L10C9JJH3 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L13C9JLJ4 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L12C9JPN9 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L11C9JVI0 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L21D6R901 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L18D6R9N7 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L22D6RA61 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L17D6RBQ6 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L19D6RCP7 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L20D6RJB6 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 NR1I2O75469 434 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 MCCD1P59942 119 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-222ENST00000544585 PTK2Q05397 1052 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 USP17L24Q0WX57 530 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 ARMC2Q8NEN0 867 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 METP08581 1390 aa9.07□□□□□ -0.96
CPSF7-222ENST00000544585 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 TK2O00142 265 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 RASA1P20936 1047 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 PPP4CP60510 307 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 SCUBE3Q8IX30 993 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 FAM174AQ8TBP5 190 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 FAM200AQ8TCP9 573 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 CEP126Q9P2H0 1117 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 GPSM3Q9Y4H4 160 aa9.06□□□□□ -0.96
CPSF7-222ENST00000544585 ADGRL3Q9HAR2 1447 aa9.05□□□□□ -0.96
CPSF7-222ENST00000544585 C1orf167Q5SNV9 1468 aa9.05□□□□□ -0.96
CPSF7-222ENST00000544585 LZTS3O60299 673 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-222ENST00000544585 ARID4AP29374 1257 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-222ENST00000544585 SF3B2Q13435 895 aaKnown RBP9.05□□□□□ -0.96
CPSF7-222ENST00000544585 NCOA4Q13772 614 aa9.05□□□□□ -0.96
CPSF7-222ENST00000544585 CRTC2Q53ET0 693 aaPredicted RBP9.05□□□□□ -0.96
CPSF7-222ENST00000544585 RNF135Q8IUD6 432 aa9.05□□□□□ -0.96
CPSF7-222ENST00000544585 ZNF687Q8N1G0 1237 aa9.05□□□□□ -0.96
CPSF7-222ENST00000544585 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
CPSF7-222ENST00000544585 GCC2Q8IWJ2 1684 aa9.04□□□□□ -0.96
CPSF7-222ENST00000544585 ROCK1Q13464 1354 aa9.04□□□□□ -0.96
CPSF7-222ENST00000544585 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
CPSF7-222ENST00000544585 PDXDC2PQ6P474 469 aa9.04□□□□□ -0.96
CPSF7-222ENST00000544585 GPKOWQ92917 476 aaPredicted RBP eCLIP9.04□□□□□ -0.963e-7■■■■□ 21.6
CPSF7-222ENST00000544585 PCDHB9Q9Y5E1 797 aa9.04□□□□□ -0.96
CPSF7-222ENST00000544585 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
CPSF7-222ENST00000544585 ATRNO75882 1429 aa9.04□□□□□ -0.96
CPSF7-222ENST00000544585 MYO5BQ9ULV0 1848 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 GOLGA8CPA6NN73 597 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 CCNYL3P0C7X3 344 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 SSFA2P28290 1259 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 EMP3P54852 163 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 PTK7Q13308 1070 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 UNC5CLQ8IV45 518 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 PLPP7Q8NBV4 271 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 ANKK1Q8NFD2 765 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 THAP11Q96EK4 314 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 STAC3Q96MF2 364 aa9.03□□□□□ -0.96
CPSF7-222ENST00000544585 CDCA7Q9BWT1 371 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms