RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 PLEKHF1Q96S99 279 aa13.13□□□□□ -0.31
MDH1-216ENST00000544381 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
MDH1-216ENST00000544381 KIF24Q5T7B8 1368 aa13.13□□□□□ -0.31
MDH1-216ENST00000544381 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
MDH1-216ENST00000544381 HMOX1P09601 288 aa13.13□□□□□ -0.31
MDH1-216ENST00000544381 DSG2Q14126 1118 aa13.13□□□□□ -0.31
MDH1-216ENST00000544381 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
MDH1-216ENST00000544381 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
MDH1-216ENST00000544381 KHSRPQ92945 711 aaKnown RBP eCLIP13.13□□□□□ -0.312e-8■■□□□ 14.2
MDH1-216ENST00000544381 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
MDH1-216ENST00000544381 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
MDH1-216ENST00000544381 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
MDH1-216ENST00000544381 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
MDH1-216ENST00000544381 OVOS2A0A0G2JMS6 1433 aa13.11□□□□□ -0.31
MDH1-216ENST00000544381 CRB1P82279 1406 aa13.11□□□□□ -0.31
MDH1-216ENST00000544381 KCNQ2O43526 872 aa13.11□□□□□ -0.31
MDH1-216ENST00000544381 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
MDH1-216ENST00000544381 CRISPLD2Q9H0B8 497 aa13.11□□□□□ -0.31
MDH1-216ENST00000544381 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 E9PSI1 815 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 GCP02774 474 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 HOXC9P31274 260 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
MDH1-216ENST00000544381 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
MDH1-216ENST00000544381 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
MDH1-216ENST00000544381 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
MDH1-216ENST00000544381 LTN1O94822 1766 aa13.09□□□□□ -0.31
MDH1-216ENST00000544381 NFAT5O94916 1531 aa13.09□□□□□ -0.31
MDH1-216ENST00000544381 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
MDH1-216ENST00000544381 PDE4AP27815 886 aa13.09□□□□□ -0.31
MDH1-216ENST00000544381 EVA1CP58658 441 aa13.09□□□□□ -0.31
MDH1-216ENST00000544381 PAPPAQ13219 1627 aa13.08□□□□□ -0.31
MDH1-216ENST00000544381 BCL9O00512 1426 aa13.08□□□□□ -0.32
MDH1-216ENST00000544381 RIPK4P57078 832 aa13.08□□□□□ -0.32
MDH1-216ENST00000544381 NBPF14Q5TI25 921 aa13.08□□□□□ -0.32
MDH1-216ENST00000544381 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
MDH1-216ENST00000544381 IP6K1Q92551 441 aa13.08□□□□□ -0.32
MDH1-216ENST00000544381 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
MDH1-216ENST00000544381 PLSCR1O15162 318 aa13.07□□□□□ -0.32
MDH1-216ENST00000544381 PTGER2P43116 358 aa13.07□□□□□ -0.32
MDH1-216ENST00000544381 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
MDH1-216ENST00000544381 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
MDH1-216ENST00000544381 GOLGB1Q14789 3259 aaKnown RBP13.07□□□□□ -0.32
MDH1-216ENST00000544381 CHD4Q14839 1912 aa13.06□□□□□ -0.32
MDH1-216ENST00000544381 NUDT7P0C024 238 aa13.06□□□□□ -0.32
MDH1-216ENST00000544381 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
MDH1-216ENST00000544381 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
MDH1-216ENST00000544381 MARCH10Q8NA82 808 aaPredicted RBP13.06□□□□□ -0.32
MDH1-216ENST00000544381 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
MDH1-216ENST00000544381 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
MDH1-216ENST00000544381 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
MDH1-216ENST00000544381 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
MDH1-216ENST00000544381 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
MDH1-216ENST00000544381 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
MDH1-216ENST00000544381 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
MDH1-216ENST00000544381 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
MDH1-216ENST00000544381 EYA1Q99502 592 aa13.04□□□□□ -0.32
MDH1-216ENST00000544381 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
MDH1-216ENST00000544381 PPP1R1BQ9UD71 204 aaPredicted RBP13.04□□□□□ -0.32
MDH1-216ENST00000544381 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
MDH1-216ENST00000544381 CALD1Q05682 793 aaKnown RBP13.03□□□□□ -0.32
MDH1-216ENST00000544381 PPP1R15BQ5SWA1 713 aa13.03□□□□□ -0.32
MDH1-216ENST00000544381 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
MDH1-216ENST00000544381 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
MDH1-216ENST00000544381 ZBTB7AO95365 584 aa13.02□□□□□ -0.33
MDH1-216ENST00000544381 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
MDH1-216ENST00000544381 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
MDH1-216ENST00000544381 IL16Q14005 1332 aa13.02□□□□□ -0.33
MDH1-216ENST00000544381 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
MDH1-216ENST00000544381 WDR17Q8IZU2 1322 aa13.02□□□□□ -0.33
MDH1-216ENST00000544381 DDB1Q16531 1140 aa13.01□□□□□ -0.33
MDH1-216ENST00000544381 ZNF784Q8NCA9 323 aaPredicted RBP13.01□□□□□ -0.33
MDH1-216ENST00000544381 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
MDH1-216ENST00000544381 KRTAP3-2Q9BYR7 98 aa13.01□□□□□ -0.33
MDH1-216ENST00000544381 KDRP35968 1356 aa13.01□□□□□ -0.33
MDH1-216ENST00000544381 BTAF1O14981 1849 aa13.01□□□□□ -0.33
MDH1-216ENST00000544381 CEP350Q5VT06 3117 aa13□□□□□ -0.33
MDH1-216ENST00000544381 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
MDH1-216ENST00000544381 TBC1D12O60347 775 aa13□□□□□ -0.33
MDH1-216ENST00000544381 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
MDH1-216ENST00000544381 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
MDH1-216ENST00000544381 ABCC6O95255 1503 aa12.99□□□□□ -0.33
MDH1-216ENST00000544381 TNS2Q63HR2 1409 aa12.99□□□□□ -0.33
MDH1-216ENST00000544381 RRP1P56182 461 aaKnown RBP12.99□□□□□ -0.33
MDH1-216ENST00000544381 ZNF687Q8N1G0 1237 aa12.99□□□□□ -0.33
MDH1-216ENST00000544381 ANKRD24Q8TF21 1146 aa12.99□□□□□ -0.33
MDH1-216ENST00000544381 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
MDH1-216ENST00000544381 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
MDH1-216ENST00000544381 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
MDH1-216ENST00000544381 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
MDH1-216ENST00000544381 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
MDH1-216ENST00000544381 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
MDH1-216ENST00000544381 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
MDH1-216ENST00000544381 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
MDH1-216ENST00000544381 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
MDH1-216ENST00000544381 FHDC1Q9C0D6 1143 aaPredicted RBP12.97□□□□□ -0.33
MDH1-216ENST00000544381 LHX6Q9UPM6 363 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms