RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 IL1RAPL2Q9NP60 686 aa21.79■■□□□ 1.08
PTPN6-222ENST00000543744 ATF3P18847 181 aa21.79■■□□□ 1.08
PTPN6-222ENST00000543744 GZF1Q9H116 711 aaPredicted RBP21.78■■□□□ 1.08
PTPN6-222ENST00000543744 HEG1Q9ULI3 1381 aa21.78■■□□□ 1.08
PTPN6-222ENST00000543744 CHMLP26374 656 aa21.77■■□□□ 1.07
PTPN6-222ENST00000543744 RHPN1Q8TCX5 695 aa21.77■■□□□ 1.07
PTPN6-222ENST00000543744 PTMSP20962 102 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 NUTM1Q86Y26 1132 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 RAPGEF4Q8WZA2 1011 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 KIF1BPQ96EK5 621 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 MAP3K2Q9Y2U5 619 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 LMTK3Q96Q04 1460 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 TUBGCP6Q96RT7 1819 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 HSP90AB4PQ58FF6 505 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 KSR2Q6VAB6 950 aa21.75■■□□□ 1.07
PTPN6-222ENST00000543744 ALDH1L1O75891 902 aa21.74■■□□□ 1.07
PTPN6-222ENST00000543744 MCCP23508 829 aa21.74■■□□□ 1.07
PTPN6-222ENST00000543744 PROSER3Q2NL68 480 aa21.74■■□□□ 1.07
PTPN6-222ENST00000543744 NLRP2Q9NX02 1062 aa21.74■■□□□ 1.07
PTPN6-222ENST00000543744 HYPKQ9NX55 129 aa21.74■■□□□ 1.07
PTPN6-222ENST00000543744 ALS2Q96Q42 1657 aa21.74■■□□□ 1.07
PTPN6-222ENST00000543744 SSFA2P28290 1259 aa21.73■■□□□ 1.07
PTPN6-222ENST00000543744 TMEM94Q12767 1356 aa21.73■■□□□ 1.07
PTPN6-222ENST00000543744 PRAMEF22A3QJZ6 481 aa21.73■■□□□ 1.07
PTPN6-222ENST00000543744 GOLGA6L3A6NEY3 463 aa21.73■■□□□ 1.07
PTPN6-222ENST00000543744 UNC5CLQ8IV45 518 aa21.73■■□□□ 1.07
PTPN6-222ENST00000543744 C9orf78Q9NZ63 289 aaPredicted RBP21.73■■□□□ 1.07
PTPN6-222ENST00000543744 ANO2Q9NQ90 1003 aa21.72■■□□□ 1.07
PTPN6-222ENST00000543744 HDAC5Q9UQL6 1122 aa21.72■■□□□ 1.07
PTPN6-222ENST00000543744 RGPD5Q99666 1765 aa21.72■■□□□ 1.07
PTPN6-222ENST00000543744 NUCB2P80303 420 aa21.72■■□□□ 1.07
PTPN6-222ENST00000543744 SKOR2Q2VWA4 1001 aaPredicted RBP21.72■■□□□ 1.07
PTPN6-222ENST00000543744 CWC22Q9HCG8 908 aaKnown RBP21.72■■□□□ 1.07
PTPN6-222ENST00000543744 TATP17735 454 aaPredicted RBP21.71■■□□□ 1.07
PTPN6-222ENST00000543744 MTX1Q13505 466 aa21.71■■□□□ 1.07
PTPN6-222ENST00000543744 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
PTPN6-222ENST00000543744 FSD2A1L4K1 749 aa21.7■■□□□ 1.06
PTPN6-222ENST00000543744 CLEC17AQ6ZS10 378 aa21.7■■□□□ 1.06
PTPN6-222ENST00000543744 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
PTPN6-222ENST00000543744 SIPA1L3O60292 1781 aaPredicted RBP21.7■■□□□ 1.06
PTPN6-222ENST00000543744 DDX58O95786 925 aaKnown RBP21.7■■□□□ 1.06
PTPN6-222ENST00000543744 ANAPC15P60006 121 aa21.7■■□□□ 1.06
PTPN6-222ENST00000543744 PI4K2BQ8TCG2 481 aa21.7■■□□□ 1.06
PTPN6-222ENST00000543744 DDX21Q9NR30 783 aaKnown RBP eCLIP21.7■■□□□ 1.06
PTPN6-222ENST00000543744 SPG7Q9UQ90 795 aa21.7■■□□□ 1.06
PTPN6-222ENST00000543744 DCCP43146 1447 aa21.69■■□□□ 1.06
PTPN6-222ENST00000543744 GOLGA6L22H0YM25 854 aa21.69■■□□□ 1.06
PTPN6-222ENST00000543744 NEK4P51957 841 aa21.69■■□□□ 1.06
PTPN6-222ENST00000543744 OS9Q13438 667 aaPredicted RBP21.69■■□□□ 1.06
PTPN6-222ENST00000543744 NPHP3Q7Z494 1330 aa21.69■■□□□ 1.06
PTPN6-222ENST00000543744 ZNF790Q6PG37 636 aa21.68■■□□□ 1.06
PTPN6-222ENST00000543744 SLC52A2Q9HAB3 445 aa21.68■■□□□ 1.06
PTPN6-222ENST00000543744 CSB-PGBD3P0DP91 1061 aa21.68■■□□□ 1.06
PTPN6-222ENST00000543744 LINS1Q8NG48 757 aa21.68■■□□□ 1.06
PTPN6-222ENST00000543744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.68■■□□□ 1.06
PTPN6-222ENST00000543744 PHKG2P15735 406 aa21.67■■□□□ 1.06
PTPN6-222ENST00000543744 MCM2P49736 904 aa21.67■■□□□ 1.06
PTPN6-222ENST00000543744 CWF19L2Q2TBE0 894 aaKnown RBP21.67■■□□□ 1.06
PTPN6-222ENST00000543744 EPB41L2O43491 1005 aaKnown RBP21.67■■□□□ 1.06
PTPN6-222ENST00000543744 CADPS2Q86UW7 1296 aa21.67■■□□□ 1.06
PTPN6-222ENST00000543744 BAG4O95429 457 aaKnown RBP21.66■■□□□ 1.06
PTPN6-222ENST00000543744 MAP4K4O95819 1239 aaPredicted RBP21.66■■□□□ 1.06
PTPN6-222ENST00000543744 AIMP1Q12904 312 aaKnown RBP21.66■■□□□ 1.06
PTPN6-222ENST00000543744 SLC39A6Q13433 755 aa21.66■■□□□ 1.06
PTPN6-222ENST00000543744 ARXQ96QS3 562 aa21.66■■□□□ 1.06
PTPN6-222ENST00000543744 RTN4Q9NQC3 1192 aaKnown RBP21.66■■□□□ 1.06
PTPN6-222ENST00000543744 PALD1Q9ULE6 856 aa21.66■■□□□ 1.06
PTPN6-222ENST00000543744 KDM6AO15550 1401 aaPredicted RBP21.66■■□□□ 1.06
PTPN6-222ENST00000543744 PDIA6Q15084 440 aa21.65■■□□□ 1.06
PTPN6-222ENST00000543744 IFNL2Q8IZJ0 200 aa21.65■■□□□ 1.06
PTPN6-222ENST00000543744 CNTROBQ8N137 903 aa21.65■■□□□ 1.06
PTPN6-222ENST00000543744 NFATC2IPQ8NCF5 419 aa21.65■■□□□ 1.06
PTPN6-222ENST00000543744 CABLES1Q8TDN4 633 aa21.65■■□□□ 1.06
PTPN6-222ENST00000543744 CYP2E1P05181 493 aaPredicted RBP21.65■■□□□ 1.06
PTPN6-222ENST00000543744 CLASRPQ8N2M8 674 aaKnown RBP21.65■■□□□ 1.06
PTPN6-222ENST00000543744 ZGPATQ8N5A5 531 aaKnown RBP21.65■■□□□ 1.06
PTPN6-222ENST00000543744 TTC41PQ6P2S7 1318 aa21.64■■□□□ 1.06
PTPN6-222ENST00000543744 USP42Q9H9J4 1324 aaKnown RBP21.64■■□□□ 1.06
PTPN6-222ENST00000543744 GRM8O00222 908 aa21.64■■□□□ 1.05
PTPN6-222ENST00000543744 XRCC6P12956 609 aaKnown RBP eCLIP21.64■■□□□ 1.05
PTPN6-222ENST00000543744 ERC1Q8IUD2 1116 aa21.64■■□□□ 1.05
PTPN6-222ENST00000543744 MEGF6O75095 1541 aa21.64■■□□□ 1.05
PTPN6-222ENST00000543744 IL17RAQ96F46 866 aa21.63■■□□□ 1.05
PTPN6-222ENST00000543744 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
PTPN6-222ENST00000543744 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
PTPN6-222ENST00000543744 TMX3Q96JJ7 454 aa21.63■■□□□ 1.05
PTPN6-222ENST00000543744 ISY1Q9ULR0 285 aaKnown RBP21.63■■□□□ 1.05
PTPN6-222ENST00000543744 UTYO14607 1347 aa21.62■■□□□ 1.05
PTPN6-222ENST00000543744 GLRX3O76003 335 aaKnown RBP21.62■■□□□ 1.05
PTPN6-222ENST00000543744 CHRNA2Q15822 529 aa21.62■■□□□ 1.05
PTPN6-222ENST00000543744 IL25Q9H293 177 aa21.62■■□□□ 1.05
PTPN6-222ENST00000543744 LARP1Q6PKG0 1096 aaKnown RBP21.62■■□□□ 1.05
PTPN6-222ENST00000543744 ABCC6O95255 1503 aa21.61■■□□□ 1.05
PTPN6-222ENST00000543744 STRCP1A6NGW2 1772 aa21.61■■□□□ 1.05
PTPN6-222ENST00000543744 COL18A1P39060 1754 aa21.61■■□□□ 1.05
PTPN6-222ENST00000543744 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
PTPN6-222ENST00000543744 SGSM2O43147 1006 aa21.61■■□□□ 1.05
PTPN6-222ENST00000543744 MRE11P49959 708 aa21.61■■□□□ 1.05
PTPN6-222ENST00000543744 PKP1Q13835 747 aa21.61■■□□□ 1.05
PTPN6-222ENST00000543744 DCAF5Q96JK2 942 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms