RNA–Protein interactions for RNA: ENST00000542947.1

SLC6A13-210, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-210ENST00000542947 C8orf58Q8NAV2 365 aa23.85■■□□□ 1.41
SLC6A13-210ENST00000542947 PRAMEF22A3QJZ6 481 aa23.84■■□□□ 1.41
SLC6A13-210ENST00000542947 CYP19A1P11511 503 aaPredicted RBP23.84■■□□□ 1.41
SLC6A13-210ENST00000542947 TWISTNBQ3B726 338 aaPredicted RBP23.84■■□□□ 1.41
SLC6A13-210ENST00000542947 RC3H1Q5TC82 1133 aaKnown RBP23.83■■□□□ 1.41
SLC6A13-210ENST00000542947 USP16Q9Y5T5 823 aa23.83■■□□□ 1.41
SLC6A13-210ENST00000542947 ELL2O00472 640 aaPredicted RBP23.82■■□□□ 1.4
SLC6A13-210ENST00000542947 CRKLP46109 303 aaKnown RBP23.82■■□□□ 1.4
SLC6A13-210ENST00000542947 NBPF14Q5TI25 921 aa23.82■■□□□ 1.4
SLC6A13-210ENST00000542947 AK7Q96M32 723 aa23.82■■□□□ 1.4
SLC6A13-210ENST00000542947 ERBB4Q15303 1308 aa23.82■■□□□ 1.4
SLC6A13-210ENST00000542947 MYH14Q7Z406 1995 aaKnown RBP23.82■■□□□ 1.4
SLC6A13-210ENST00000542947 HDGFL1Q5TGJ6 251 aa23.81■■□□□ 1.4
SLC6A13-210ENST00000542947 TSPYL6Q8N831 410 aa23.81■■□□□ 1.4
SLC6A13-210ENST00000542947 CCDC87Q9NVE4 849 aa23.81■■□□□ 1.4
SLC6A13-210ENST00000542947 STK32BQ9NY57 414 aa23.81■■□□□ 1.4
SLC6A13-210ENST00000542947 CT47B1P0C2W7 299 aaPredicted RBP23.8■■□□□ 1.4
SLC6A13-210ENST00000542947 EIF2S2P20042 333 aaKnown RBP23.8■■□□□ 1.4
SLC6A13-210ENST00000542947 AKT1S1Q96B36 256 aa23.8■■□□□ 1.4
SLC6A13-210ENST00000542947 CCDC30Q5VVM6 783 aa23.78■■□□□ 1.4
SLC6A13-210ENST00000542947 INTS5Q6P9B9 1019 aaKnown RBP23.78■■□□□ 1.4
SLC6A13-210ENST00000542947 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
SLC6A13-210ENST00000542947 UBR3Q6ZT12 1888 aa23.78■■□□□ 1.4
SLC6A13-210ENST00000542947 QSER1Q2KHR3 1735 aa23.77■■□□□ 1.4
SLC6A13-210ENST00000542947 GNPATO15228 680 aa23.77■■□□□ 1.4
SLC6A13-210ENST00000542947 VAMP4O75379 141 aa23.77■■□□□ 1.4
SLC6A13-210ENST00000542947 ZNF827Q17R98 1081 aa23.77■■□□□ 1.4
SLC6A13-210ENST00000542947 ZBTB1Q9Y2K1 713 aa23.77■■□□□ 1.4
SLC6A13-210ENST00000542947 RPS6KA4O75676 772 aa23.76■■□□□ 1.39
SLC6A13-210ENST00000542947 A1BGP04217 495 aa23.76■■□□□ 1.39
SLC6A13-210ENST00000542947 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
SLC6A13-210ENST00000542947 ANO8Q9HCE9 1232 aaPredicted RBP23.76■■□□□ 1.39
SLC6A13-210ENST00000542947 DBF4Q9UBU7 674 aaPredicted RBP23.76■■□□□ 1.39
SLC6A13-210ENST00000542947 RTCBQ9Y3I0 505 aaKnown RBP23.76■■□□□ 1.39
SLC6A13-210ENST00000542947 CACNA1FO60840 1977 aa23.75■■□□□ 1.39
SLC6A13-210ENST00000542947 CANXP27824 592 aaKnown RBP23.75■■□□□ 1.39
SLC6A13-210ENST00000542947 IL6STP40189 918 aaPredicted RBP23.75■■□□□ 1.39
SLC6A13-210ENST00000542947 NPM2Q86SE8 214 aaKnown RBP23.75■■□□□ 1.39
SLC6A13-210ENST00000542947 NECTIN2Q92692 538 aa23.75■■□□□ 1.39
SLC6A13-210ENST00000542947 TFCP2L1Q9NZI6 479 aa23.75■■□□□ 1.39
SLC6A13-210ENST00000542947 TUBGCP6Q96RT7 1819 aa23.75■■□□□ 1.39
SLC6A13-210ENST00000542947 ADRA2BP18089 450 aa23.74■■□□□ 1.39
SLC6A13-210ENST00000542947 SSFA2P28290 1259 aa23.74■■□□□ 1.39
SLC6A13-210ENST00000542947 FLAD1Q8NFF5 587 aa23.74■■□□□ 1.39
SLC6A13-210ENST00000542947 STK31Q9BXU1 1019 aa23.74■■□□□ 1.39
SLC6A13-210ENST00000542947 DDX21Q9NR30 783 aaKnown RBP eCLIP23.74■■□□□ 1.39
SLC6A13-210ENST00000542947 CHPF2Q9P2E5 772 aa23.73■■□□□ 1.39
SLC6A13-210ENST00000542947 COL15A1P39059 1388 aa23.71■■□□□ 1.39
SLC6A13-210ENST00000542947 A0A087WZG4 1122 aa23.71■■□□□ 1.39
SLC6A13-210ENST00000542947 NBPF26B4DH59 902 aa23.71■■□□□ 1.39
SLC6A13-210ENST00000542947 EIF5P55010 431 aaKnown RBP23.71■■□□□ 1.39
SLC6A13-210ENST00000542947 NBPF10Q6P3W6 841 aaKnown RBP23.71■■□□□ 1.39
SLC6A13-210ENST00000542947 NBPF15Q8N660 670 aa23.71■■□□□ 1.39
SLC6A13-210ENST00000542947 MYL6BP14649 208 aa23.7■■□□□ 1.38
SLC6A13-210ENST00000542947 PDIA6Q15084 440 aa23.7■■□□□ 1.38
SLC6A13-210ENST00000542947 TRAPPC3LQ5T215 181 aa23.7■■□□□ 1.38
SLC6A13-210ENST00000542947 HYPKQ9NX55 129 aa23.7■■□□□ 1.38
SLC6A13-210ENST00000542947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.69■■□□□ 1.38
SLC6A13-210ENST00000542947 PHF14O94880 888 aa23.69■■□□□ 1.38
SLC6A13-210ENST00000542947 PIP4K2AP48426 406 aaPredicted RBP23.69■■□□□ 1.38
SLC6A13-210ENST00000542947 ALDH1L2Q3SY69 923 aa23.69■■□□□ 1.38
SLC6A13-210ENST00000542947 ZNF330Q9Y3S2 320 aaPredicted RBP23.69■■□□□ 1.38
SLC6A13-210ENST00000542947 C4AP0C0L4 1744 aa23.68■■□□□ 1.38
SLC6A13-210ENST00000542947 PNPLA7Q6ZV29 1317 aa23.68■■□□□ 1.38
SLC6A13-210ENST00000542947 PROSER3Q2NL68 480 aa23.67■■□□□ 1.38
SLC6A13-210ENST00000542947 ANXA1P04083 346 aa23.66■■□□□ 1.38
SLC6A13-210ENST00000542947 SLC4A2P04920 1241 aa23.66■■□□□ 1.38
SLC6A13-210ENST00000542947 RFC4P35249 363 aa23.66■■□□□ 1.38
SLC6A13-210ENST00000542947 LRP10Q7Z4F1 713 aa23.66■■□□□ 1.38
SLC6A13-210ENST00000542947 AMIGO3Q86WK7 504 aa23.66■■□□□ 1.38
SLC6A13-210ENST00000542947 TCERG1O14776 1098 aaKnown RBP23.65■■□□□ 1.38
SLC6A13-210ENST00000542947 ARHGEF1Q92888 912 aaKnown RBP23.65■■□□□ 1.38
SLC6A13-210ENST00000542947 R3HDM1Q15032 1099 aaKnown RBP23.64■■□□□ 1.37
SLC6A13-210ENST00000542947 KIF6Q6ZMV9 814 aa23.64■■□□□ 1.37
SLC6A13-210ENST00000542947 SSH1Q8WYL5 1049 aa23.64■■□□□ 1.37
SLC6A13-210ENST00000542947 MSH5O43196 834 aa23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 RARSP54136 660 aaKnown RBP23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 DZIP3Q86Y13 1208 aaKnown RBP23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 COL23A1Q86Y22 540 aaPredicted RBP23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 ARXQ96QS3 562 aa23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 SMC4Q9NTJ3 1288 aa23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 SCN7AQ01118 1682 aa23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 BCORQ6W2J9 1755 aa23.63■■□□□ 1.37
SLC6A13-210ENST00000542947 ZPR1O75312 459 aa23.62■■□□□ 1.37
SLC6A13-210ENST00000542947 SMIM5Q71RC9 77 aa23.62■■□□□ 1.37
SLC6A13-210ENST00000542947 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
SLC6A13-210ENST00000542947 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
SLC6A13-210ENST00000542947 NARFQ9UHQ1 456 aa23.62■■□□□ 1.37
SLC6A13-210ENST00000542947 USP42Q9H9J4 1324 aaKnown RBP23.61■■□□□ 1.37
SLC6A13-210ENST00000542947 CASZ1Q86V15 1759 aa23.61■■□□□ 1.37
SLC6A13-210ENST00000542947 MRPL50Q8N5N7 158 aaKnown RBP23.61■■□□□ 1.37
SLC6A13-210ENST00000542947 TBC1D2BQ9UPU7 963 aa23.61■■□□□ 1.37
SLC6A13-210ENST00000542947 RGL2O15211 777 aa23.6■■□□□ 1.37
SLC6A13-210ENST00000542947 DDX58O95786 925 aaKnown RBP23.6■■□□□ 1.37
SLC6A13-210ENST00000542947 AIMP1Q12904 312 aaKnown RBP23.6■■□□□ 1.37
SLC6A13-210ENST00000542947 FLIIQ13045 1269 aa23.6■■□□□ 1.37
SLC6A13-210ENST00000542947 PHAXQ9H814 394 aaKnown RBP23.6■■□□□ 1.37
SLC6A13-210ENST00000542947 MAP3K15Q6ZN16 1313 aa23.59■■□□□ 1.37
SLC6A13-210ENST00000542947 BRPF1P55201 1214 aaPredicted RBP23.59■■□□□ 1.37
SLC6A13-210ENST00000542947 TTLL7Q6ZT98 887 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms