RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DZIP3Q86Y13 1208 aaKnown RBP6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 FAM177A1Q8N128 213 aaPredicted RBP6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 TMEM151AQ8N4L1 468 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 TRIM52Q96A61 297 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 CHIC2Q9UKJ5 165 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 NOD1Q9Y239 953 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 SENP3-EIF4A1A0A087X0R7 540 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 ESPNB1AK53 854 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 ERVH48-1M5A8F1 160 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 LILRA1O75019 489 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 GDF11O95390 407 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 PTGIRP43119 386 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 ZNF211Q13398 564 aaPredicted RBP6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 TAS1R3Q7RTX0 852 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 FBXO33Q7Z6M2 555 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 GLYCTKQ8IVS8 523 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 SEPT12Q8IYM1 358 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 LARGE2Q8N3Y3 721 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 SREK1Q8WXA9 508 aaKnown RBP6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 DRC1Q96MC2 740 aa6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 CXXC1Q9P0U4 656 aaPredicted RBP6.03□□□□□ -1.44
SFSWAP-211ENST00000542813 ICMTO60725 284 aa6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 RECKO95980 971 aa6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 MAPK1P28482 360 aa6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 ADD1P35611 737 aaKnown RBP6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 OCLNQ16625 522 aa6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 SIX5Q8N196 739 aa6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 BCL11AQ9H165 835 aa6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 ANO2Q9NQ90 1003 aa6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 RBM19Q9Y4C8 960 aaKnown RBP6.02□□□□□ -1.45
SFSWAP-211ENST00000542813 DKK1O94907 266 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 SEC13P55735 322 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 ZC3H6P61129 1189 aaKnown RBP6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 LYSMD3Q7Z3D4 306 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 CCDC125Q86Z20 511 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 KDF1Q8NAX2 398 aaPredicted RBP6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 WHAMMQ8TF30 809 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 PRIMPOLQ96LW4 560 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 ASB16Q96NS5 453 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 DCTN4Q9UJW0 460 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 DOLKQ9UPQ8 538 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 KIAA1024Q9UPX6 916 aa6.01□□□□□ -1.45
SFSWAP-211ENST00000542813 C21orf2O43822 256 aa6□□□□□ -1.45
SFSWAP-211ENST00000542813 ARHGEF15O94989 841 aa6□□□□□ -1.45
SFSWAP-211ENST00000542813 GTF2IP78347 998 aa6□□□□□ -1.45
SFSWAP-211ENST00000542813 TAGLNQ01995 201 aaKnown RBP6□□□□□ -1.45
SFSWAP-211ENST00000542813 ZBTB7BO15156 539 aaPredicted RBP5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 ADAMTS2O95450 1211 aa5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 RNF144AP50876 292 aaPredicted RBP5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 SRSF11Q05519 484 aaKnown RBP5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 TSGA10IPQ3SY00 556 aa5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 OXLD1Q5BKU9 147 aa5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 CCDC102BQ68D86 513 aa5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 ZSCAN29Q8IWY8 852 aaPredicted RBP5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 CYLDQ9NQC7 956 aa5.99□□□□□ -1.45
SFSWAP-211ENST00000542813 COL19A1Q14993 1142 aa5.98□□□□□ -1.45
SFSWAP-211ENST00000542813 TPCN2Q8NHX9 752 aa5.98□□□□□ -1.45
SFSWAP-211ENST00000542813 GTF3C2Q8WUA4 911 aaPredicted RBP5.98□□□□□ -1.45
SFSWAP-211ENST00000542813 GMCL1Q96IK5 515 aa5.98□□□□□ -1.45
SFSWAP-211ENST00000542813 DNMT3AQ9Y6K1 912 aaPredicted RBP5.98□□□□□ -1.45
SFSWAP-211ENST00000542813 SFI1A8K8P3 1242 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 IRS1P35568 1242 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 MAP3K10Q02779 954 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 PSME1Q06323 249 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 SF3B2Q13435 895 aaKnown RBP5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 SF3A1Q15459 793 aaKnown RBP5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 TSNAXIP1Q2TAA8 658 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 EAPPQ56P03 285 aaPredicted RBP5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 NAALADL2Q58DX5 795 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 KANK3Q6NY19 840 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 PRICKLE2Q7Z3G6 844 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 SCARF2Q96GP6 870 aaPredicted RBP5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 CCDC85AQ96PX6 553 aaPredicted RBP5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 MKNK1Q9BUB5 465 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 CUEDC1Q9NWM3 386 aaPredicted RBP5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 SEPT3Q9UH03 358 aa5.97□□□□□ -1.45
SFSWAP-211ENST00000542813 GPC1P35052 558 aa5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 ARHGAP4P98171 946 aa5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 FKBP4Q02790 459 aaKnown RBP eCLIP5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 GAS6Q14393 721 aa5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 ECM1Q16610 540 aa5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 LYPD4Q6UWN0 246 aa5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 RGL4Q8IZJ4 473 aa5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 UBXN4Q92575 508 aa5.96□□□□□ -1.46
SFSWAP-211ENST00000542813 GIGYF1O75420 1035 aaPredicted RBP5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 LGR5O75473 907 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 RHOQP17081 205 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 CANXP27824 592 aaKnown RBP5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 MTMR3Q13615 1198 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 RNF20Q5VTR2 975 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 FOXR1Q6PIV2 292 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 TRIM22Q8IYM9 498 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 ZNF837Q96EG3 531 aaPredicted RBP5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 HINFPQ9BQA5 517 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 ENAMQ9NRM1 1142 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 MBIPQ9NS73 344 aa5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 PPP1R1BQ9UD71 204 aaPredicted RBP5.95□□□□□ -1.46
SFSWAP-211ENST00000542813 MEN1O00255 615 aa5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 PTCD1O75127 700 aaKnown RBP5.94□□□□□ -1.46
SFSWAP-211ENST00000542813 IGHA1P01876 353 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms