RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 APAF1O14727 1248 aa20.33■□□□□ 0.85
SPTB-205ENST00000542694 KCNQ3O43525 872 aa20.33■□□□□ 0.85
SPTB-205ENST00000542694 ZPR1O75312 459 aa20.33■□□□□ 0.85
SPTB-205ENST00000542694 CCDC184Q52MB2 194 aa20.33■□□□□ 0.85
SPTB-205ENST00000542694 TSPYL4Q9UJ04 414 aa20.33■□□□□ 0.85
SPTB-205ENST00000542694 MYH14Q7Z406 1995 aaKnown RBP20.32■□□□□ 0.84
SPTB-205ENST00000542694 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
SPTB-205ENST00000542694 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
SPTB-205ENST00000542694 AMIGO3Q86WK7 504 aa20.31■□□□□ 0.84
SPTB-205ENST00000542694 MIS18AQ9NYP9 233 aa20.31■□□□□ 0.84
SPTB-205ENST00000542694 TRIM35Q9UPQ4 493 aa20.31■□□□□ 0.84
SPTB-205ENST00000542694 TJP1Q07157 1748 aa20.3■□□□□ 0.84
SPTB-205ENST00000542694 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
SPTB-205ENST00000542694 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
SPTB-205ENST00000542694 IL6STP40189 918 aaPredicted RBP20.3■□□□□ 0.84
SPTB-205ENST00000542694 EIF4A1P60842 406 aaKnown RBP20.29■□□□□ 0.84
SPTB-205ENST00000542694 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
SPTB-205ENST00000542694 ZBTB1Q9Y2K1 713 aa20.29■□□□□ 0.84
SPTB-205ENST00000542694 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
SPTB-205ENST00000542694 SMIM5Q71RC9 77 aa20.28■□□□□ 0.84
SPTB-205ENST00000542694 NGEFQ8N5V2 710 aa20.28■□□□□ 0.84
SPTB-205ENST00000542694 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
SPTB-205ENST00000542694 USP16Q9Y5T5 823 aa20.28■□□□□ 0.84
SPTB-205ENST00000542694 CHL1O00533 1208 aa20.27■□□□□ 0.84
SPTB-205ENST00000542694 GIGYF1O75420 1035 aaPredicted RBP20.27■□□□□ 0.84
SPTB-205ENST00000542694 CFAP44Q96MT7 982 aa20.27■□□□□ 0.84
SPTB-205ENST00000542694 FHDC1Q9C0D6 1143 aaPredicted RBP20.27■□□□□ 0.84
SPTB-205ENST00000542694 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
SPTB-205ENST00000542694 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.83
SPTB-205ENST00000542694 COL15A1P39059 1388 aa20.26■□□□□ 0.83
SPTB-205ENST00000542694 A1BGP04217 495 aa20.26■□□□□ 0.83
SPTB-205ENST00000542694 GYS1P13807 737 aa20.26■□□□□ 0.83
SPTB-205ENST00000542694 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
SPTB-205ENST00000542694 SYT17Q9BSW7 474 aa20.26■□□□□ 0.83
SPTB-205ENST00000542694 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
SPTB-205ENST00000542694 GNAI1P63096 354 aa20.25■□□□□ 0.83
SPTB-205ENST00000542694 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
SPTB-205ENST00000542694 CD2APQ9Y5K6 639 aa20.25■□□□□ 0.83
SPTB-205ENST00000542694 PARP3Q9Y6F1 533 aa20.25■□□□□ 0.83
SPTB-205ENST00000542694 CCER2I3L3R5 266 aa20.24■□□□□ 0.83
SPTB-205ENST00000542694 MMP10P09238 476 aa20.24■□□□□ 0.83
SPTB-205ENST00000542694 FAM9BQ8IZU0 186 aa20.24■□□□□ 0.83
SPTB-205ENST00000542694 KLHL34Q8N239 644 aa20.23■□□□□ 0.83
SPTB-205ENST00000542694 IFT57Q9NWB7 429 aa20.23■□□□□ 0.83
SPTB-205ENST00000542694 ZNF330Q9Y3S2 320 aaPredicted RBP20.23■□□□□ 0.83
SPTB-205ENST00000542694 ERBB4Q15303 1308 aa20.23■□□□□ 0.83
SPTB-205ENST00000542694 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
SPTB-205ENST00000542694 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
SPTB-205ENST00000542694 RGL2O15211 777 aa20.21■□□□□ 0.83
SPTB-205ENST00000542694 HOXB7P09629 217 aa20.21■□□□□ 0.83
SPTB-205ENST00000542694 SRP68Q9UHB9 627 aaKnown RBP20.21■□□□□ 0.83
SPTB-205ENST00000542694 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
SPTB-205ENST00000542694 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
SPTB-205ENST00000542694 ZNF652Q9Y2D9 606 aa20.2■□□□□ 0.82
SPTB-205ENST00000542694 ZNF853P0CG23 659 aa20.19■□□□□ 0.82
SPTB-205ENST00000542694 FKBP8Q14318 412 aa20.19■□□□□ 0.82
SPTB-205ENST00000542694 CLEC4GQ6UXB4 293 aa20.19■□□□□ 0.82
SPTB-205ENST00000542694 DZIP3Q86Y13 1208 aaKnown RBP20.19■□□□□ 0.82
SPTB-205ENST00000542694 TM4SF1P30408 202 aa20.18■□□□□ 0.82
SPTB-205ENST00000542694 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
SPTB-205ENST00000542694 TBC1D2BQ9UPU7 963 aa20.18■□□□□ 0.82
SPTB-205ENST00000542694 IL16Q14005 1332 aa20.18■□□□□ 0.82
SPTB-205ENST00000542694 WDR63Q8IWG1 891 aa20.17■□□□□ 0.82
SPTB-205ENST00000542694 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
SPTB-205ENST00000542694 EIF2S2P20042 333 aaKnown RBP20.16■□□□□ 0.82
SPTB-205ENST00000542694 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
SPTB-205ENST00000542694 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
SPTB-205ENST00000542694 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
SPTB-205ENST00000542694 C4AP0C0L4 1744 aa20.16■□□□□ 0.82
SPTB-205ENST00000542694 TGFB2P61812 414 aa20.15■□□□□ 0.82
SPTB-205ENST00000542694 CAMTA2O94983 1202 aa20.14■□□□□ 0.81
SPTB-205ENST00000542694 NFIXQ14938 502 aa20.14■□□□□ 0.81
SPTB-205ENST00000542694 KIF6Q6ZMV9 814 aa20.14■□□□□ 0.81
SPTB-205ENST00000542694 SETDB2Q96T68 719 aa20.14■□□□□ 0.81
SPTB-205ENST00000542694 ERVV-1B6SEH8 477 aa20.13■□□□□ 0.81
SPTB-205ENST00000542694 DUSP27Q5VZP5 1158 aa20.13■□□□□ 0.81
SPTB-205ENST00000542694 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
SPTB-205ENST00000542694 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
SPTB-205ENST00000542694 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
SPTB-205ENST00000542694 MYL6BP14649 208 aa20.12■□□□□ 0.81
SPTB-205ENST00000542694 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
SPTB-205ENST00000542694 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
SPTB-205ENST00000542694 SERPINB2P05120 415 aa20.11■□□□□ 0.81
SPTB-205ENST00000542694 GPR162Q16538 588 aa20.11■□□□□ 0.81
SPTB-205ENST00000542694 HDGFL1Q5TGJ6 251 aa20.11■□□□□ 0.81
SPTB-205ENST00000542694 DBF4Q9UBU7 674 aaPredicted RBP20.11■□□□□ 0.81
SPTB-205ENST00000542694 NPHP1O15259 732 aa20.1■□□□□ 0.81
SPTB-205ENST00000542694 DDR1Q08345 913 aa20.1■□□□□ 0.81
SPTB-205ENST00000542694 PDZRN3Q9UPQ7 1066 aa20.1■□□□□ 0.81
SPTB-205ENST00000542694 SALL2Q9Y467 1007 aaPredicted RBP20.1■□□□□ 0.81
SPTB-205ENST00000542694 GRIN3BO60391 1043 aa20.09■□□□□ 0.81
SPTB-205ENST00000542694 TBC1D9BQ66K14 1250 aa20.09■□□□□ 0.81
SPTB-205ENST00000542694 BICDL1Q6ZP65 573 aa20.09■□□□□ 0.81
SPTB-205ENST00000542694 NLGN2Q8NFZ4 835 aa20.09■□□□□ 0.81
SPTB-205ENST00000542694 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.81
SPTB-205ENST00000542694 MAP3K15Q6ZN16 1313 aa20.08■□□□□ 0.81
SPTB-205ENST00000542694 MYH16Q9H6N6 1097 aa20.08■□□□□ 0.81
SPTB-205ENST00000542694 HYPKQ9NX55 129 aa20.08■□□□□ 0.81
SPTB-205ENST00000542694 GOLGA2Q08379 1002 aa20.07■□□□□ 0.8
SPTB-205ENST00000542694 PDIA6Q15084 440 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms