RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 PRICKLE2Q7Z3G6 844 aa7.99□□□□□ -1.13
C2CD3-218ENST00000542484 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
C2CD3-218ENST00000542484 C2orf49Q9BVC5 232 aaPredicted RBP7.99□□□□□ -1.13
C2CD3-218ENST00000542484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.98□□□□□ -1.13
C2CD3-218ENST00000542484 NBPF10Q6P3W6 841 aaKnown RBP7.98□□□□□ -1.13
C2CD3-218ENST00000542484 ZDHHC1Q8WTX9 485 aa7.98□□□□□ -1.13
C2CD3-218ENST00000542484 COL26A1Q96A83 441 aa7.98□□□□□ -1.13
C2CD3-218ENST00000542484 CABP1Q9NZU7 370 aa7.98□□□□□ -1.13
C2CD3-218ENST00000542484 GMPR2Q9P2T1 348 aaKnown RBP7.98□□□□□ -1.13
C2CD3-218ENST00000542484 FIGNL2A6NMB9 653 aa7.97□□□□□ -1.13
C2CD3-218ENST00000542484 EML1O00423 815 aa7.97□□□□□ -1.13
C2CD3-218ENST00000542484 MAN1A2O60476 641 aa7.97□□□□□ -1.13
C2CD3-218ENST00000542484 NOS2P35228 1153 aa7.97□□□□□ -1.13
C2CD3-218ENST00000542484 POU4F2Q12837 409 aa7.97□□□□□ -1.13
C2CD3-218ENST00000542484 CHMP3Q9Y3E7 222 aa7.97□□□□□ -1.13
C2CD3-218ENST00000542484 SERTM1A2A2V5 107 aa7.96□□□□□ -1.14
C2CD3-218ENST00000542484 PLA2G4AP47712 749 aa7.96□□□□□ -1.14
C2CD3-218ENST00000542484 KCTD17Q8N5Z5 321 aa7.96□□□□□ -1.14
C2CD3-218ENST00000542484 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.14
C2CD3-218ENST00000542484 L3MBTL2Q969R5 705 aa7.96□□□□□ -1.14
C2CD3-218ENST00000542484 PTCD1O75127 700 aaKnown RBP7.95□□□□□ -1.14
C2CD3-218ENST00000542484 KCNA1Q09470 495 aa7.95□□□□□ -1.14
C2CD3-218ENST00000542484 PATL2C9JE40 543 aaKnown RBP7.94□□□□□ -1.14
C2CD3-218ENST00000542484 RHOQP17081 205 aa7.94□□□□□ -1.14
C2CD3-218ENST00000542484 SH3PXD2AQ5TCZ1 1133 aa7.94□□□□□ -1.14
C2CD3-218ENST00000542484 ZDHHC3Q9NYG2 299 aa7.94□□□□□ -1.14
C2CD3-218ENST00000542484 ZNF232Q9UNY5 417 aa7.94□□□□□ -1.14
C2CD3-218ENST00000542484 PARP3Q9Y6F1 533 aa7.94□□□□□ -1.14
C2CD3-218ENST00000542484 A0A1B0GTH6 734 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 SOBPA7XYQ1 873 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 ARID4AP29374 1257 aaPredicted RBP7.93□□□□□ -1.14
C2CD3-218ENST00000542484 PHKA2P46019 1235 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 NBPF1Q3BBV0 1214 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 TXNDC2Q86VQ3 553 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 VTI1AQ96AJ9 217 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 MKNK1Q9BUB5 465 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 TIMMDC1Q9NPL8 285 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 GNEQ9Y223 722 aaKnown RBP7.93□□□□□ -1.14
C2CD3-218ENST00000542484 DYRK1BQ9Y463 629 aa7.93□□□□□ -1.14
C2CD3-218ENST00000542484 SENP3-EIF4A1A0A087X0R7 540 aa7.92□□□□□ -1.14
C2CD3-218ENST00000542484 SNRPBP14678 240 aaKnown RBP7.92□□□□□ -1.14
C2CD3-218ENST00000542484 ATP4AP20648 1035 aa7.92□□□□□ -1.14
C2CD3-218ENST00000542484 SCNN1AP37088 669 aa7.92□□□□□ -1.14
C2CD3-218ENST00000542484 C1orf53Q5VUE5 145 aa7.92□□□□□ -1.14
C2CD3-218ENST00000542484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.92□□□□□ -1.14
C2CD3-218ENST00000542484 MTMR7Q9Y216 660 aa7.92□□□□□ -1.14
C2CD3-218ENST00000542484 C11orf95C9JLR9 678 aaPredicted RBP7.91□□□□□ -1.14
C2CD3-218ENST00000542484 TXLNAP40222 546 aa7.91□□□□□ -1.14
C2CD3-218ENST00000542484 PTSQ03393 145 aa7.91□□□□□ -1.14
C2CD3-218ENST00000542484 CAPN12Q6ZSI9 719 aa7.91□□□□□ -1.14
C2CD3-218ENST00000542484 MYO19Q96H55 970 aa7.91□□□□□ -1.14
C2CD3-218ENST00000542484 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
C2CD3-218ENST00000542484 GPC6Q9Y625 555 aaPredicted RBP7.91□□□□□ -1.14
C2CD3-218ENST00000542484 SLC35F4A4IF30 521 aa7.9□□□□□ -1.14
C2CD3-218ENST00000542484 RTN1Q16799 776 aa7.9□□□□□ -1.14
C2CD3-218ENST00000542484 AEBP1Q8IUX7 1158 aa7.9□□□□□ -1.14
C2CD3-218ENST00000542484 ALDH16A1Q8IZ83 802 aa7.9□□□□□ -1.14
C2CD3-218ENST00000542484 CCER1Q8TC90 406 aaPredicted RBP7.9□□□□□ -1.14
C2CD3-218ENST00000542484 PHACTR1Q9C0D0 580 aa7.9□□□□□ -1.14
C2CD3-218ENST00000542484 SEPT3Q9UH03 358 aa7.9□□□□□ -1.14
C2CD3-218ENST00000542484 HCN4Q9Y3Q4 1203 aa7.9□□□□□ -1.14
C2CD3-218ENST00000542484 POTECB2RU33 542 aa7.89□□□□□ -1.15
C2CD3-218ENST00000542484 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
C2CD3-218ENST00000542484 MSX1P28360 303 aa7.89□□□□□ -1.15
C2CD3-218ENST00000542484 C16orf46Q6P387 395 aa7.89□□□□□ -1.15
C2CD3-218ENST00000542484 C7orf43Q8WVR3 580 aa7.89□□□□□ -1.15
C2CD3-218ENST00000542484 AIDAQ96BJ3 306 aa7.89□□□□□ -1.15
C2CD3-218ENST00000542484 F11P03951 625 aa7.88□□□□□ -1.15
C2CD3-218ENST00000542484 NGLY1Q96IV0 654 aa7.88□□□□□ -1.15
C2CD3-218ENST00000542484 CRISPLD1Q9H336 500 aa7.88□□□□□ -1.15
C2CD3-218ENST00000542484 EGFL7Q9UHF1 273 aa7.88□□□□□ -1.15
C2CD3-218ENST00000542484 SERPINB4P48594 390 aa7.87□□□□□ -1.15
C2CD3-218ENST00000542484 NAA30Q147X3 362 aaPredicted RBP7.87□□□□□ -1.15
C2CD3-218ENST00000542484 COX20Q5RI15 118 aa7.87□□□□□ -1.15
C2CD3-218ENST00000542484 CCDC155Q8N6L0 562 aa7.87□□□□□ -1.15
C2CD3-218ENST00000542484 HELQQ8TDG4 1101 aa7.87□□□□□ -1.15
C2CD3-218ENST00000542484 GTF3C2Q8WUA4 911 aaPredicted RBP7.87□□□□□ -1.15
C2CD3-218ENST00000542484 SAP130Q9H0E3 1048 aa7.87□□□□□ -1.15
C2CD3-218ENST00000542484 IVNS1ABPQ9Y6Y0 642 aa7.87□□□□□ -1.15
C2CD3-218ENST00000542484 HIF1AQ16665 826 aa7.86□□□□□ -1.15
C2CD3-218ENST00000542484 RHPN1Q8TCX5 695 aa7.86□□□□□ -1.15
C2CD3-218ENST00000542484 GPAMQ9HCL2 828 aa7.86□□□□□ -1.15
C2CD3-218ENST00000542484 LRFN2Q9ULH4 789 aa7.86□□□□□ -1.15
C2CD3-218ENST00000542484 LBRQ14739 615 aaKnown RBP7.85□□□□□ -1.15
C2CD3-218ENST00000542484 ZIC5Q96T25 663 aa7.85□□□□□ -1.15
C2CD3-218ENST00000542484 GAS2L1Q99501 681 aaPredicted RBP7.85□□□□□ -1.15
C2CD3-218ENST00000542484 DNMT3AQ9Y6K1 912 aaPredicted RBP7.85□□□□□ -1.15
C2CD3-218ENST00000542484 ZBTB7CA1YPR0 619 aa7.84□□□□□ -1.15
C2CD3-218ENST00000542484 TNFRSF10BO14763 440 aa7.84□□□□□ -1.15
C2CD3-218ENST00000542484 SF3B2Q13435 895 aaKnown RBP7.84□□□□□ -1.15
C2CD3-218ENST00000542484 DGKZQ13574 1117 aa7.84□□□□□ -1.15
C2CD3-218ENST00000542484 C11orf91Q3C1V1 193 aa7.84□□□□□ -1.15
C2CD3-218ENST00000542484 ARSJQ5FYB0 599 aaPredicted RBP7.84□□□□□ -1.15
C2CD3-218ENST00000542484 BICDL1Q6ZP65 573 aa7.84□□□□□ -1.15
C2CD3-218ENST00000542484 RUBCNLQ9H714 662 aa7.84□□□□□ -1.15
C2CD3-218ENST00000542484 A0A1W2PNR3 127 aa7.83□□□□□ -1.16
C2CD3-218ENST00000542484 ABL1P00519 1130 aa7.83□□□□□ -1.16
C2CD3-218ENST00000542484 ITGA6P23229 1130 aa7.83□□□□□ -1.16
C2CD3-218ENST00000542484 ZNF211Q13398 564 aaPredicted RBP7.83□□□□□ -1.16
C2CD3-218ENST00000542484 NLRP8Q86W28 1048 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms