RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
C2CD3-217ENST00000542452 WDR43Q15061 677 aaKnown RBP eCLIP15.25■□□□□ 0.03
C2CD3-217ENST00000542452 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
C2CD3-217ENST00000542452 NLGN2Q8NFZ4 835 aa15.25■□□□□ 0.03
C2CD3-217ENST00000542452 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
C2CD3-217ENST00000542452 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
C2CD3-217ENST00000542452 NEFMP07197 916 aa15.24■□□□□ 0.03
C2CD3-217ENST00000542452 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
C2CD3-217ENST00000542452 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
C2CD3-217ENST00000542452 AFDNP55196 1824 aaKnown RBP15.24■□□□□ 0.03
C2CD3-217ENST00000542452 RIPK4P57078 832 aa15.23■□□□□ 0.03
C2CD3-217ENST00000542452 RUNDC1Q96C34 613 aa15.23■□□□□ 0.03
C2CD3-217ENST00000542452 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
C2CD3-217ENST00000542452 NRXN2Q9P2S2 1712 aa15.23■□□□□ 0.03
C2CD3-217ENST00000542452 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
C2CD3-217ENST00000542452 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
C2CD3-217ENST00000542452 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
C2CD3-217ENST00000542452 MMP10P09238 476 aa15.21■□□□□ 0.03
C2CD3-217ENST00000542452 CANXP27824 592 aaKnown RBP15.21■□□□□ 0.03
C2CD3-217ENST00000542452 RFC4P35249 363 aa15.21■□□□□ 0.03
C2CD3-217ENST00000542452 FKBP8Q14318 412 aa15.21■□□□□ 0.03
C2CD3-217ENST00000542452 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.03
C2CD3-217ENST00000542452 TRIM35Q9UPQ4 493 aa15.21■□□□□ 0.03
C2CD3-217ENST00000542452 USP16Q9Y5T5 823 aa15.21■□□□□ 0.03
C2CD3-217ENST00000542452 BRCA1P38398 1863 aaKnown RBP15.2■□□□□ 0.02
C2CD3-217ENST00000542452 A1BGP04217 495 aa15.2■□□□□ 0.02
C2CD3-217ENST00000542452 PIP4K2AP48426 406 aaPredicted RBP15.2■□□□□ 0.02
C2CD3-217ENST00000542452 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
C2CD3-217ENST00000542452 USPL1Q5W0Q7 1092 aa15.2■□□□□ 0.02
C2CD3-217ENST00000542452 STARD3NLO95772 234 aa15.19■□□□□ 0.02
C2CD3-217ENST00000542452 DDR1Q08345 913 aa15.19■□□□□ 0.02
C2CD3-217ENST00000542452 NEUROD2Q15784 382 aa15.19■□□□□ 0.02
C2CD3-217ENST00000542452 ANP32CO43423 234 aa15.18■□□□□ 0.02
C2CD3-217ENST00000542452 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
C2CD3-217ENST00000542452 TEX13AQ9BXU3 409 aaPredicted RBP15.18■□□□□ 0.02
C2CD3-217ENST00000542452 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
C2CD3-217ENST00000542452 PXDNLA1KZ92 1463 aa15.18■□□□□ 0.02
C2CD3-217ENST00000542452 SNRPA1P09661 255 aaKnown RBP15.17■□□□□ 0.02
C2CD3-217ENST00000542452 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
C2CD3-217ENST00000542452 PNISRQ8TF01 805 aaKnown RBP15.17■□□□□ 0.02
C2CD3-217ENST00000542452 ANKRD31Q8N7Z5 1873 aa15.16■□□□□ 0.02
C2CD3-217ENST00000542452 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
C2CD3-217ENST00000542452 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
C2CD3-217ENST00000542452 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
C2CD3-217ENST00000542452 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
C2CD3-217ENST00000542452 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
C2CD3-217ENST00000542452 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
C2CD3-217ENST00000542452 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
C2CD3-217ENST00000542452 APAF1O14727 1248 aa15.15■□□□□ 0.02
C2CD3-217ENST00000542452 GIGYF1O75420 1035 aaPredicted RBP15.15■□□□□ 0.02
C2CD3-217ENST00000542452 TM4SF1P30408 202 aa15.15■□□□□ 0.02
C2CD3-217ENST00000542452 MRS2Q9HD23 443 aa15.15■□□□□ 0.02
C2CD3-217ENST00000542452 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
C2CD3-217ENST00000542452 ZNF330Q9Y3S2 320 aaPredicted RBP15.15■□□□□ 0.02
C2CD3-217ENST00000542452 DLEC1Q9Y238 1755 aa15.15■□□□□ 0.02
C2CD3-217ENST00000542452 CHD4Q14839 1912 aa15.15■□□□□ 0.02
C2CD3-217ENST00000542452 UTRNP46939 3433 aa15.14■□□□□ 0.01
C2CD3-217ENST00000542452 SENP3-EIF4A1A0A087X0R7 540 aa15.14■□□□□ 0.01
C2CD3-217ENST00000542452 ZPR1O75312 459 aa15.14■□□□□ 0.01
C2CD3-217ENST00000542452 CAMTA2O94983 1202 aa15.14■□□□□ 0.01
C2CD3-217ENST00000542452 YBX3P16989 372 aaKnown RBP eCLIP15.14■□□□□ 0.01
C2CD3-217ENST00000542452 NFIXQ14938 502 aa15.14■□□□□ 0.01
C2CD3-217ENST00000542452 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
C2CD3-217ENST00000542452 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
C2CD3-217ENST00000542452 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
C2CD3-217ENST00000542452 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
C2CD3-217ENST00000542452 NUP98P52948 1817 aa15.13■□□□□ 0.01
C2CD3-217ENST00000542452 A0A087WZG4 1122 aa15.12■□□□□ 0.01
C2CD3-217ENST00000542452 WWC3Q9ULE0 1092 aa15.12■□□□□ 0.01
C2CD3-217ENST00000542452 PARP3Q9Y6F1 533 aa15.12■□□□□ 0.01
C2CD3-217ENST00000542452 CHL1O00533 1208 aa15.11■□□□□ 0.01
C2CD3-217ENST00000542452 TBC1D9BQ66K14 1250 aa15.11■□□□□ 0.01
C2CD3-217ENST00000542452 DZIP3Q86Y13 1208 aaKnown RBP15.11■□□□□ 0.01
C2CD3-217ENST00000542452 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
C2CD3-217ENST00000542452 ARFGEF1Q9Y6D6 1849 aa15.1■□□□□ 0.01
C2CD3-217ENST00000542452 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
C2CD3-217ENST00000542452 GOLGB1Q14789 3259 aaKnown RBP15.09■□□□□ 0.01
C2CD3-217ENST00000542452 ZNF853P0CG23 659 aa15.09■□□□□ 0.01
C2CD3-217ENST00000542452 BICDL1Q6ZP65 573 aa15.09■□□□□ 0.01
C2CD3-217ENST00000542452 LRP10Q7Z4F1 713 aa15.09■□□□□ 0.01
C2CD3-217ENST00000542452 LAS1LQ9Y4W2 734 aaKnown RBP15.09■□□□□ 0.01
C2CD3-217ENST00000542452 ANKRD36CQ5JPF3 1778 aa15.08■□□□□ 0.01
C2CD3-217ENST00000542452 PDIA6Q15084 440 aa15.08■□□□□ 0
C2CD3-217ENST00000542452 GPR162Q16538 588 aa15.08■□□□□ 0
C2CD3-217ENST00000542452 PROSER3Q2NL68 480 aa15.08■□□□□ 0
C2CD3-217ENST00000542452 MBIPQ9NS73 344 aa15.08■□□□□ 0
C2CD3-217ENST00000542452 TNRC6CQ9HCJ0 1690 aaKnown RBP15.08■□□□□ 0
C2CD3-217ENST00000542452 SERPINB2P05120 415 aa15.07■□□□□ 0
C2CD3-217ENST00000542452 DPEP1P16444 411 aa15.07■□□□□ 0
C2CD3-217ENST00000542452 CFAP44Q96MT7 982 aa15.07■□□□□ 0
C2CD3-217ENST00000542452 CACNA1SQ13698 1873 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 A0A0G2JLW4 131 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 DCAF8L1A6NGE4 600 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 ANXA1P04083 346 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 MYL6BP14649 208 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 KCNA3P22001 575 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 HLFQ16534 295 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 TTLL7Q6ZT98 887 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 ERBB4Q15303 1308 aa15.06■□□□□ 0
C2CD3-217ENST00000542452 EIF2S2P20042 333 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms