RNA–Protein interactions for RNA: ENST00000542449.1

LINC02417-201, Transcript of long intergenic non-protein coding RNA 2417, humanhuman

TSL 2 BASIC

Gene LINC02417, Length 515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02417-201ENST00000542449 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
LINC02417-201ENST00000542449 TUBGCP6Q96RT7 1819 aa18.71■□□□□ 0.59
LINC02417-201ENST00000542449 HEG1Q9ULI3 1381 aa18.7■□□□□ 0.58
LINC02417-201ENST00000542449 ZBTB1Q9Y2K1 713 aa18.7■□□□□ 0.58
LINC02417-201ENST00000542449 RIPK4P57078 832 aa18.69■□□□□ 0.58
LINC02417-201ENST00000542449 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
LINC02417-201ENST00000542449 SOS1Q07889 1333 aaPredicted RBP18.69■□□□□ 0.58
LINC02417-201ENST00000542449 A0A087WZG4 1122 aa18.68■□□□□ 0.58
LINC02417-201ENST00000542449 SNRPA1P09661 255 aaKnown RBP18.68■□□□□ 0.58
LINC02417-201ENST00000542449 FKBP8Q14318 412 aa18.68■□□□□ 0.58
LINC02417-201ENST00000542449 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
LINC02417-201ENST00000542449 USPL1Q5W0Q7 1092 aa18.68■□□□□ 0.58
LINC02417-201ENST00000542449 A1BGP04217 495 aa18.67■□□□□ 0.58
LINC02417-201ENST00000542449 THUMPD2Q9BTF0 503 aaKnown RBP18.67■□□□□ 0.58
LINC02417-201ENST00000542449 ADAMTS8Q9UP79 889 aa18.67■□□□□ 0.58
LINC02417-201ENST00000542449 USP42Q9H9J4 1324 aaKnown RBP18.67■□□□□ 0.58
LINC02417-201ENST00000542449 KCPQ6ZWJ8 1503 aa18.66■□□□□ 0.58
LINC02417-201ENST00000542449 NARFQ9UHQ1 456 aa18.66■□□□□ 0.58
LINC02417-201ENST00000542449 WWC3Q9ULE0 1092 aa18.66■□□□□ 0.58
LINC02417-201ENST00000542449 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
LINC02417-201ENST00000542449 UBR3Q6ZT12 1888 aa18.66■□□□□ 0.58
LINC02417-201ENST00000542449 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
LINC02417-201ENST00000542449 RUNDC1Q96C34 613 aa18.65■□□□□ 0.58
LINC02417-201ENST00000542449 USP16Q9Y5T5 823 aa18.65■□□□□ 0.58
LINC02417-201ENST00000542449 ZNF831Q5JPB2 1677 aa18.65■□□□□ 0.58
LINC02417-201ENST00000542449 GRIN3BO60391 1043 aa18.64■□□□□ 0.57
LINC02417-201ENST00000542449 TMPOP42166 694 aaKnown RBP18.64■□□□□ 0.57
LINC02417-201ENST00000542449 COL15A1P39059 1388 aa18.64■□□□□ 0.57
LINC02417-201ENST00000542449 ADAMTS7Q9UKP4 1686 aa18.63■□□□□ 0.57
LINC02417-201ENST00000542449 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
LINC02417-201ENST00000542449 EIF5P55010 431 aaKnown RBP18.63■□□□□ 0.57
LINC02417-201ENST00000542449 BICDL1Q6ZP65 573 aa18.63■□□□□ 0.57
LINC02417-201ENST00000542449 TBC1D2BQ9UPU7 963 aa18.63■□□□□ 0.57
LINC02417-201ENST00000542449 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
LINC02417-201ENST00000542449 IL6STP40189 918 aaPredicted RBP18.62■□□□□ 0.57
LINC02417-201ENST00000542449 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
LINC02417-201ENST00000542449 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
LINC02417-201ENST00000542449 YBX3P16989 372 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC02417-201ENST00000542449 TGFB2P61812 414 aa18.61■□□□□ 0.57
LINC02417-201ENST00000542449 TSPYL4Q9UJ04 414 aa18.61■□□□□ 0.57
LINC02417-201ENST00000542449 TM4SF1P30408 202 aa18.6■□□□□ 0.57
LINC02417-201ENST00000542449 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
LINC02417-201ENST00000542449 COL5A3P25940 1745 aaPredicted RBP18.6■□□□□ 0.57
LINC02417-201ENST00000542449 TJP1Q07157 1748 aa18.6■□□□□ 0.57
LINC02417-201ENST00000542449 VIRMAQ69YN4 1812 aaKnown RBP18.59■□□□□ 0.57
LINC02417-201ENST00000542449 DDR1Q08345 913 aa18.59■□□□□ 0.57
LINC02417-201ENST00000542449 NFIXQ14938 502 aa18.59■□□□□ 0.57
LINC02417-201ENST00000542449 COL24A1Q17RW2 1714 aa18.58■□□□□ 0.57
LINC02417-201ENST00000542449 POLRMTO00411 1230 aaKnown RBP18.58■□□□□ 0.56
LINC02417-201ENST00000542449 EIF4A1P60842 406 aaKnown RBP18.58■□□□□ 0.56
LINC02417-201ENST00000542449 DZIP3Q86Y13 1208 aaKnown RBP18.58■□□□□ 0.56
LINC02417-201ENST00000542449 MYH14Q7Z406 1995 aaKnown RBP18.58■□□□□ 0.56
LINC02417-201ENST00000542449 NPHP1O15259 732 aa18.57■□□□□ 0.56
LINC02417-201ENST00000542449 SERPINB2P05120 415 aa18.57■□□□□ 0.56
LINC02417-201ENST00000542449 DPEP1P16444 411 aa18.57■□□□□ 0.56
LINC02417-201ENST00000542449 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
LINC02417-201ENST00000542449 BCL2L12Q9HB09 334 aa18.57■□□□□ 0.56
LINC02417-201ENST00000542449 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
LINC02417-201ENST00000542449 GIGYF1O75420 1035 aaPredicted RBP18.56■□□□□ 0.56
LINC02417-201ENST00000542449 BCS1LQ9Y276 419 aa18.56■□□□□ 0.56
LINC02417-201ENST00000542449 TBC1D9BQ66K14 1250 aa18.55■□□□□ 0.56
LINC02417-201ENST00000542449 SETDB2Q96T68 719 aa18.55■□□□□ 0.56
LINC02417-201ENST00000542449 CICQ96RK0 1608 aaPredicted RBP18.55■□□□□ 0.56
LINC02417-201ENST00000542449 APAF1O14727 1248 aa18.54■□□□□ 0.56
LINC02417-201ENST00000542449 EIF2S2P20042 333 aaKnown RBP18.54■□□□□ 0.56
LINC02417-201ENST00000542449 BABAM1Q9NWV8 329 aa18.54■□□□□ 0.56
LINC02417-201ENST00000542449 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
LINC02417-201ENST00000542449 CAMTA2O94983 1202 aa18.53■□□□□ 0.56
LINC02417-201ENST00000542449 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
LINC02417-201ENST00000542449 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
LINC02417-201ENST00000542449 PIM2Q9P1W9 311 aa18.53■□□□□ 0.56
LINC02417-201ENST00000542449 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
LINC02417-201ENST00000542449 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
LINC02417-201ENST00000542449 MYL6BP14649 208 aa18.52■□□□□ 0.56
LINC02417-201ENST00000542449 YTHDC1Q96MU7 727 aaKnown RBP18.52■□□□□ 0.56
LINC02417-201ENST00000542449 UBR2Q8IWV8 1755 aa18.52■□□□□ 0.55
LINC02417-201ENST00000542449 C10orf71Q711Q0 1435 aa18.51■□□□□ 0.55
LINC02417-201ENST00000542449 SIPA1L3O60292 1781 aaPredicted RBP18.51■□□□□ 0.55
LINC02417-201ENST00000542449 CHRNA5P30532 468 aa18.51■□□□□ 0.55
LINC02417-201ENST00000542449 ARHGAP27Q6ZUM4 889 aa18.51■□□□□ 0.55
LINC02417-201ENST00000542449 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
LINC02417-201ENST00000542449 DALRD3Q5D0E6 543 aaKnown RBP18.5■□□□□ 0.55
LINC02417-201ENST00000542449 CHL1O00533 1208 aa18.49■□□□□ 0.55
LINC02417-201ENST00000542449 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
LINC02417-201ENST00000542449 KIF6Q6ZMV9 814 aa18.49■□□□□ 0.55
LINC02417-201ENST00000542449 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
LINC02417-201ENST00000542449 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
LINC02417-201ENST00000542449 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
LINC02417-201ENST00000542449 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
LINC02417-201ENST00000542449 FAM177BA6PVY3 158 aa18.48■□□□□ 0.55
LINC02417-201ENST00000542449 H0YIN7 160 aa18.48■□□□□ 0.55
LINC02417-201ENST00000542449 KCNA3P22001 575 aa18.48■□□□□ 0.55
LINC02417-201ENST00000542449 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
LINC02417-201ENST00000542449 NBPF5PQ86XG9 351 aaPredicted RBP18.48■□□□□ 0.55
LINC02417-201ENST00000542449 C2CD5Q86YS7 1000 aa18.48■□□□□ 0.55
LINC02417-201ENST00000542449 ZNF784Q8NCA9 323 aaPredicted RBP18.48■□□□□ 0.55
LINC02417-201ENST00000542449 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
LINC02417-201ENST00000542449 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
LINC02417-201ENST00000542449 GTF2E1P29083 439 aaPredicted RBP18.47■□□□□ 0.55
LINC02417-201ENST00000542449 ST5P78524 1137 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms