RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 NLGN1Q8N2Q7 840 aa26.45■■□□□ 1.82
CACNA2D4-215ENST00000542340 THUMPD2Q9BTF0 503 aaKnown RBP26.45■■□□□ 1.82
CACNA2D4-215ENST00000542340 ZBTB1Q9Y2K1 713 aa26.44■■□□□ 1.82
CACNA2D4-215ENST00000542340 GYS1P13807 737 aa26.43■■□□□ 1.82
CACNA2D4-215ENST00000542340 SNRPA1P09661 255 aaKnown RBP26.42■■□□□ 1.82
CACNA2D4-215ENST00000542340 CCDC184Q52MB2 194 aa26.42■■□□□ 1.82
CACNA2D4-215ENST00000542340 MIS18AQ9NYP9 233 aa26.42■■□□□ 1.82
CACNA2D4-215ENST00000542340 USP42Q9H9J4 1324 aaKnown RBP26.41■■□□□ 1.82
CACNA2D4-215ENST00000542340 RRP7AQ9Y3A4 280 aaKnown RBP26.41■■□□□ 1.82
CACNA2D4-215ENST00000542340 CANXP27824 592 aaKnown RBP26.4■■□□□ 1.82
CACNA2D4-215ENST00000542340 NEUROD2Q15784 382 aa26.4■■□□□ 1.82
CACNA2D4-215ENST00000542340 KLHL34Q8N239 644 aa26.4■■□□□ 1.82
CACNA2D4-215ENST00000542340 DCAF8L1A6NGE4 600 aa26.39■■□□□ 1.82
CACNA2D4-215ENST00000542340 MMP10P09238 476 aa26.39■■□□□ 1.82
CACNA2D4-215ENST00000542340 SRP68Q9UHB9 627 aaKnown RBP26.39■■□□□ 1.82
CACNA2D4-215ENST00000542340 USP16Q9Y5T5 823 aa26.39■■□□□ 1.82
CACNA2D4-215ENST00000542340 COL15A1P39059 1388 aa26.38■■□□□ 1.81
CACNA2D4-215ENST00000542340 ZPR1O75312 459 aa26.38■■□□□ 1.81
CACNA2D4-215ENST00000542340 EIF5P55010 431 aaKnown RBP26.38■■□□□ 1.81
CACNA2D4-215ENST00000542340 CD2APQ9Y5K6 639 aa26.38■■□□□ 1.81
CACNA2D4-215ENST00000542340 C4AP0C0L4 1744 aa26.38■■□□□ 1.81
CACNA2D4-215ENST00000542340 BABAM1Q9NWV8 329 aa26.37■■□□□ 1.81
CACNA2D4-215ENST00000542340 NARFQ9UHQ1 456 aa26.37■■□□□ 1.81
CACNA2D4-215ENST00000542340 TRIM35Q9UPQ4 493 aa26.37■■□□□ 1.81
CACNA2D4-215ENST00000542340 A0A087WZG4 1122 aa26.36■■□□□ 1.81
CACNA2D4-215ENST00000542340 PRAMEF22A3QJZ6 481 aa26.36■■□□□ 1.81
CACNA2D4-215ENST00000542340 A1BGP04217 495 aa26.36■■□□□ 1.81
CACNA2D4-215ENST00000542340 IL6STP40189 918 aaPredicted RBP26.36■■□□□ 1.81
CACNA2D4-215ENST00000542340 MRS2Q9HD23 443 aa26.36■■□□□ 1.81
CACNA2D4-215ENST00000542340 EIF4A1P60842 406 aaKnown RBP26.35■■□□□ 1.81
CACNA2D4-215ENST00000542340 USPL1Q5W0Q7 1092 aa26.35■■□□□ 1.81
CACNA2D4-215ENST00000542340 KDM3BQ7LBC6 1761 aa26.34■■□□□ 1.81
CACNA2D4-215ENST00000542340 FKBP8Q14318 412 aa26.34■■□□□ 1.81
CACNA2D4-215ENST00000542340 APAF1O14727 1248 aa26.33■■□□□ 1.81
CACNA2D4-215ENST00000542340 NLGN2Q8NFZ4 835 aa26.33■■□□□ 1.81
CACNA2D4-215ENST00000542340 TSPYL4Q9UJ04 414 aa26.33■■□□□ 1.81
CACNA2D4-215ENST00000542340 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
CACNA2D4-215ENST00000542340 NPM2Q86SE8 214 aaKnown RBP26.31■■□□□ 1.8
CACNA2D4-215ENST00000542340 PARP3Q9Y6F1 533 aa26.31■■□□□ 1.8
CACNA2D4-215ENST00000542340 TM4SF1P30408 202 aa26.3■■□□□ 1.8
CACNA2D4-215ENST00000542340 ZNF330Q9Y3S2 320 aaPredicted RBP26.29■■□□□ 1.8
CACNA2D4-215ENST00000542340 CHL1O00533 1208 aa26.28■■□□□ 1.8
CACNA2D4-215ENST00000542340 BCL2L12Q9HB09 334 aa26.28■■□□□ 1.8
CACNA2D4-215ENST00000542340 TBC1D2BQ9UPU7 963 aa26.27■■□□□ 1.8
CACNA2D4-215ENST00000542340 NBPF26B4DH59 902 aa26.26■■□□□ 1.79
CACNA2D4-215ENST00000542340 DDR1Q08345 913 aa26.26■■□□□ 1.79
CACNA2D4-215ENST00000542340 NBPF10Q6P3W6 841 aaKnown RBP26.26■■□□□ 1.79
CACNA2D4-215ENST00000542340 NBPF15Q8N660 670 aa26.26■■□□□ 1.79
CACNA2D4-215ENST00000542340 PIP4K2AP48426 406 aaPredicted RBP26.25■■□□□ 1.79
CACNA2D4-215ENST00000542340 POLRMTO00411 1230 aaKnown RBP26.24■■□□□ 1.79
CACNA2D4-215ENST00000542340 NFIXQ14938 502 aa26.24■■□□□ 1.79
CACNA2D4-215ENST00000542340 DZIP3Q86Y13 1208 aaKnown RBP26.24■■□□□ 1.79
CACNA2D4-215ENST00000542340 CALD1Q05682 793 aaKnown RBP26.23■■□□□ 1.79
CACNA2D4-215ENST00000542340 GPR162Q16538 588 aa26.23■■□□□ 1.79
CACNA2D4-215ENST00000542340 CFAP44Q96MT7 982 aa26.23■■□□□ 1.79
CACNA2D4-215ENST00000542340 LAS1LQ9Y4W2 734 aaKnown RBP26.23■■□□□ 1.79
CACNA2D4-215ENST00000542340 LAMB4A4D0S4 1761 aa26.23■■□□□ 1.79
CACNA2D4-215ENST00000542340 C10orf71Q711Q0 1435 aa26.22■■□□□ 1.79
CACNA2D4-215ENST00000542340 CAMTA2O94983 1202 aa26.22■■□□□ 1.79
CACNA2D4-215ENST00000542340 TGFB2P61812 414 aa26.21■■□□□ 1.79
CACNA2D4-215ENST00000542340 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
CACNA2D4-215ENST00000542340 KIF13BQ9NQT8 1826 aa26.19■■□□□ 1.78
CACNA2D4-215ENST00000542340 ZNF853P0CG23 659 aa26.19■■□□□ 1.78
CACNA2D4-215ENST00000542340 PELP1Q8IZL8 1130 aaKnown RBP26.19■■□□□ 1.78
CACNA2D4-215ENST00000542340 RGL2O15211 777 aa26.18■■□□□ 1.78
CACNA2D4-215ENST00000542340 CCDC27Q2M243 656 aa26.18■■□□□ 1.78
CACNA2D4-215ENST00000542340 NCBP3Q53F19 620 aaKnown RBP26.18■■□□□ 1.78
CACNA2D4-215ENST00000542340 TBC1D9BQ66K14 1250 aa26.18■■□□□ 1.78
CACNA2D4-215ENST00000542340 CLEC4GQ6UXB4 293 aa26.18■■□□□ 1.78
CACNA2D4-215ENST00000542340 IFT57Q9NWB7 429 aa26.18■■□□□ 1.78
CACNA2D4-215ENST00000542340 SCN7AQ01118 1682 aa26.18■■□□□ 1.78
CACNA2D4-215ENST00000542340 SERPINB2P05120 415 aa26.17■■□□□ 1.78
CACNA2D4-215ENST00000542340 GNAI1P63096 354 aa26.17■■□□□ 1.78
CACNA2D4-215ENST00000542340 BICDL1Q6ZP65 573 aa26.17■■□□□ 1.78
CACNA2D4-215ENST00000542340 PXDNLA1KZ92 1463 aa26.16■■□□□ 1.78
CACNA2D4-215ENST00000542340 GRIN3BO60391 1043 aa26.15■■□□□ 1.78
CACNA2D4-215ENST00000542340 YBX3P16989 372 aaKnown RBP eCLIP26.15■■□□□ 1.78
CACNA2D4-215ENST00000542340 EIF2S2P20042 333 aaKnown RBP26.15■■□□□ 1.78
CACNA2D4-215ENST00000542340 MBIPQ9NS73 344 aa26.15■■□□□ 1.78
CACNA2D4-215ENST00000542340 ZNF652Q9Y2D9 606 aa26.15■■□□□ 1.78
CACNA2D4-215ENST00000542340 HOXB7P09629 217 aa26.14■■□□□ 1.78
CACNA2D4-215ENST00000542340 MYL6BP14649 208 aa26.14■■□□□ 1.78
CACNA2D4-215ENST00000542340 SETDB2Q96T68 719 aa26.14■■□□□ 1.78
CACNA2D4-215ENST00000542340 A0A0G2JLW4 131 aa26.13■■□□□ 1.77
CACNA2D4-215ENST00000542340 KRT24Q2M2I5 525 aa26.13■■□□□ 1.77
CACNA2D4-215ENST00000542340 FAM9BQ8IZU0 186 aa26.13■■□□□ 1.77
CACNA2D4-215ENST00000542340 NGEFQ8N5V2 710 aa26.13■■□□□ 1.77
CACNA2D4-215ENST00000542340 CARMIL3Q8ND23 1372 aa26.12■■□□□ 1.77
CACNA2D4-215ENST00000542340 DPEP1P16444 411 aa26.12■■□□□ 1.77
CACNA2D4-215ENST00000542340 PDIA6Q15084 440 aa26.12■■□□□ 1.77
CACNA2D4-215ENST00000542340 WWC1Q8IX03 1113 aa26.12■■□□□ 1.77
CACNA2D4-215ENST00000542340 BCORQ6W2J9 1755 aa26.12■■□□□ 1.77
CACNA2D4-215ENST00000542340 NRXN2Q9P2S2 1712 aa26.11■■□□□ 1.77
CACNA2D4-215ENST00000542340 GOLGB1Q14789 3259 aaKnown RBP26.11■■□□□ 1.77
CACNA2D4-215ENST00000542340 ERVV-1B6SEH8 477 aa26.11■■□□□ 1.77
CACNA2D4-215ENST00000542340 LRP10Q7Z4F1 713 aa26.1■■□□□ 1.77
CACNA2D4-215ENST00000542340 KIAA1551Q9HCM1 1747 aa26.1■■□□□ 1.77
CACNA2D4-215ENST00000542340 AFDNP55196 1824 aaKnown RBP26.09■■□□□ 1.77
CACNA2D4-215ENST00000542340 SENP3-EIF4A1A0A087X0R7 540 aa26.09■■□□□ 1.77
CACNA2D4-215ENST00000542340 KCNA3P22001 575 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms