RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 THOC2Q8NI27 1593 aaKnown RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 TARBP1Q13395 1621 aaKnown RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 CARNS1A5YM72 827 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 CD2BP2O95400 341 aaKnown RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 IRX6P78412 446 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 BECN1Q14457 450 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 SWI5Q1ZZU3 235 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 TSGA10IPQ3SY00 556 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 OXLD1Q5BKU9 147 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 PLA2G2CQ5R387 149 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 PPP1R18Q6NYC8 613 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 ZSCAN30Q86W11 494 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 SPNS2Q8IVW8 549 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 SIX5Q8N196 739 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 MNS1Q8NEH6 495 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 KCTD15Q96SI1 283 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 GZF1Q9H116 711 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 PRDM10Q9NQV6 1147 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 CALCOCO1Q9P1Z2 691 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 PCDHB11Q9Y5F2 797 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 RAD50Q92878 1312 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 DHX57Q6P158 1386 aaKnown RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 SMG6Q86US8 1419 aaKnown RBP5.38□□□□□ -1.55
SNHG1-219ENST00000542112 CEP164Q9UPV0 1460 aa5.38□□□□□ -1.55
SNHG1-219ENST00000542112 CFAP65Q6ZU64 1925 aaKnown RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 NRDCO43847 1150 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 MYCP01106 439 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 XRCC6P12956 609 aaKnown RBP eCLIP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 RIPK4P57078 832 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 GTF2IP78347 998 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 CLDN10P78369 228 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 HMGN5P82970 282 aaKnown RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 SKOR1P84550 965 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 LMOD3Q0VAK6 560 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 CCDC173Q0VFZ6 552 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 SETDB1Q15047 1291 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 ZKSCAN8Q15776 578 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 TMCO4Q5TGY1 634 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 VASH1Q7L8A9 365 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 MPNDQ8N594 471 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 EHBP1Q8NDI1 1231 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 CLP1Q92989 425 aaKnown RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 TIGD1Q96MW7 591 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 MYCBPQ99417 103 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 FEZ1Q99689 392 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 TERF2IPQ9NYB0 399 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 IBTKQ9P2D0 1353 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 POLA1P09884 1462 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-219ENST00000542112 ABCA5Q8WWZ7 1642 aa5.37□□□□□ -1.55
SNHG1-219ENST00000542112 TULP2O00295 520 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 ZNF500O60304 480 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-219ENST00000542112 IGSF3O75054 1194 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 MAP2K1Q02750 393 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-219ENST00000542112 DHX9Q08211 1270 aaKnown RBP5.36□□□□□ -1.55
SNHG1-219ENST00000542112 DPYDQ12882 1025 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 NBPF10Q6P3W6 841 aaKnown RBP5.36□□□□□ -1.55
SNHG1-219ENST00000542112 RPAINQ86UA6 219 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 PDCL2Q8N4E4 241 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 ZNF594Q96JF6 807 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-219ENST00000542112 CDK15Q96Q40 435 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 GNEQ9Y223 722 aaKnown RBP5.36□□□□□ -1.55
SNHG1-219ENST00000542112 CEP83Q9Y592 693 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 WDR62O43379 1518 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 ABCA10Q8WWZ4 1543 aa5.36□□□□□ -1.55
SNHG1-219ENST00000542112 ERICH3Q5RHP9 1530 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 PRXQ9BXM0 1461 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 PDS5BQ9NTI5 1447 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 TNIKQ9UKE5 1360 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 VGLL3A8MV65 326 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 ZBTB7BO15156 539 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-219ENST00000542112 NEFHP12036 1026 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 MSNP26038 577 aaKnown RBP5.35□□□□□ -1.55
SNHG1-219ENST00000542112 SEC13P55735 322 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 PSME1Q06323 249 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 FAM69CQ0P6D2 419 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 IFFO2Q5TF58 517 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 NBPF6Q5VWK0 638 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 CCDC102BQ68D86 513 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 SASS6Q6UVJ0 657 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 NBPF5PQ86XG9 351 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-219ENST00000542112 OTUD6BQ8N6M0 293 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 PRIMPOLQ96LW4 560 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 NBPF4Q96M43 638 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 ESF1Q9H501 851 aaKnown RBP5.35□□□□□ -1.55
SNHG1-219ENST00000542112 SLC52A1Q9NWF4 448 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 FAM13BQ9NYF5 915 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 KNSTRNQ9Y448 316 aa5.35□□□□□ -1.55
SNHG1-219ENST00000542112 PBRM1Q86U86 1689 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 DKK1O94907 266 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 SSFA2P28290 1259 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 ARID4AP29374 1257 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-219ENST00000542112 RBM25P49756 843 aaKnown RBP5.34□□□□□ -1.55
SNHG1-219ENST00000542112 HNRNPUQ00839 825 aaKnown RBP eCLIP5.34□□□□□ -1.55
SNHG1-219ENST00000542112 OS9Q13438 667 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-219ENST00000542112 INTS6LQ5JSJ4 861 aaKnown RBP5.34□□□□□ -1.55
SNHG1-219ENST00000542112 RC3H1Q5TC82 1133 aaKnown RBP5.34□□□□□ -1.55
SNHG1-219ENST00000542112 FAM43BQ6ZT52 329 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-219ENST00000542112 TPCN2Q8NHX9 752 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 MKL1Q969V6 931 aa5.34□□□□□ -1.55
SNHG1-219ENST00000542112 FAM210AQ96ND0 272 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms