RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 RCCD1A6NED2 376 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 MOXD2PA6NHM9 499 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 HAX1O00165 279 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 CT47B1P0C2W7 299 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-214ENST00000541600 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 MORC1Q86VD1 984 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 SLC12A5Q9H2X9 1139 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 ANKRD26Q9UPS8 1709 aa8.66□□□□□ -1.02
EPHA4-214ENST00000541600 GLI3P10071 1580 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 PTPRUQ92729 1446 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 ABCC11Q96J66 1382 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 USP17L8P0C7I0 530 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 SRPK2P78362 688 aaKnown RBP8.65□□□□□ -1.02
EPHA4-214ENST00000541600 RTL5Q5HYW3 569 aaPredicted RBP8.65□□□□□ -1.02
EPHA4-214ENST00000541600 HDGFL1Q5TGJ6 251 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 BRWD3Q6RI45 1802 aa8.65□□□□□ -1.02
EPHA4-214ENST00000541600 CAMTA1Q9Y6Y1 1673 aa8.65□□□□□ -1.03
EPHA4-214ENST00000541600 ADGRB2O60241 1585 aa8.65□□□□□ -1.03
EPHA4-214ENST00000541600 PLIN1O60240 522 aa8.64□□□□□ -1.03
EPHA4-214ENST00000541600 ATF3P18847 181 aa8.64□□□□□ -1.03
EPHA4-214ENST00000541600 ADAMTS19Q8TE59 1207 aa8.64□□□□□ -1.03
EPHA4-214ENST00000541600 SIRT1Q96EB6 747 aa8.64□□□□□ -1.03
EPHA4-214ENST00000541600 EYA1Q99502 592 aa8.64□□□□□ -1.03
EPHA4-214ENST00000541600 PCDHB15Q9Y5E8 787 aa8.64□□□□□ -1.03
EPHA4-214ENST00000541600 GOLGB1Q14789 3259 aaKnown RBP8.63□□□□□ -1.03
EPHA4-214ENST00000541600 NDUFV2P19404 249 aa8.63□□□□□ -1.03
EPHA4-214ENST00000541600 RBM25P49756 843 aaKnown RBP8.63□□□□□ -1.03
EPHA4-214ENST00000541600 C20orf194Q5TEA3 1177 aa8.63□□□□□ -1.03
EPHA4-214ENST00000541600 NDUFB9Q9Y6M9 179 aa8.63□□□□□ -1.03
EPHA4-214ENST00000541600 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
EPHA4-214ENST00000541600 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
EPHA4-214ENST00000541600 IL16Q14005 1332 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 MYO5BQ9ULV0 1848 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-214ENST00000541600 CSB-PGBD3P0DP91 1061 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 MTHFSP49914 203 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 EVX2Q03828 476 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 PRPF38BQ5VTL8 546 aaKnown RBP8.62□□□□□ -1.03
EPHA4-214ENST00000541600 TMEM132EQ6IEE7 984 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 ZNF428Q96B54 188 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 ADAM33Q9BZ11 813 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
EPHA4-214ENST00000541600 COL3A1P02461 1466 aaPredicted RBP8.62□□□□□ -1.03
EPHA4-214ENST00000541600 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 POTEFA5A3E0 1075 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 RFX1P22670 979 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 SEPT12Q8IYM1 358 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 TCP11L2Q8N4U5 519 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 TERF2IPQ9NYB0 399 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 TBX22Q9Y458 520 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 CD163L1Q9NR16 1453 aa8.61□□□□□ -1.03
EPHA4-214ENST00000541600 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-214ENST00000541600 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
EPHA4-214ENST00000541600 EZH2Q15910 746 aaKnown RBP8.6□□□□□ -1.03
EPHA4-214ENST00000541600 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
EPHA4-214ENST00000541600 PNNQ9H307 717 aaKnown RBP8.6□□□□□ -1.03
EPHA4-214ENST00000541600 USP35Q9P2H5 1018 aa8.6□□□□□ -1.03
EPHA4-214ENST00000541600 ATP7BP35670 1465 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 RARSP54136 660 aaKnown RBP8.59□□□□□ -1.03
EPHA4-214ENST00000541600 FAM182BQ5T319 152 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 SLC39A7Q92504 469 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 PLEKHF1Q96S99 279 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 PPP1R12CQ9BZL4 782 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 MYH16Q9H6N6 1097 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 PTCH1Q13635 1447 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 A0A1W2PP64 1363 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 PLEKHG1Q9ULL1 1385 aa8.59□□□□□ -1.03
EPHA4-214ENST00000541600 GPR37L1O60883 481 aa8.58□□□□□ -1.04
EPHA4-214ENST00000541600 DNAJB2P25686 324 aa8.58□□□□□ -1.04
EPHA4-214ENST00000541600 ORAI2Q96SN7 254 aa8.58□□□□□ -1.04
EPHA4-214ENST00000541600 AMOTL2Q9Y2J4 779 aa8.58□□□□□ -1.04
EPHA4-214ENST00000541600 MAPK8IP3Q9UPT6 1336 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 VIRMAQ69YN4 1812 aaKnown RBP8.57□□□□□ -1.04
EPHA4-214ENST00000541600 TECPR2O15040 1411 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 FYB1O15117 783 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 BCAR3O75815 825 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.57□□□□□ -1.04
EPHA4-214ENST00000541600 PMFBP1Q8TBY8 1022 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 CAMKK2Q96RR4 588 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 ZBTB3Q9H5J0 574 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 TMEM134Q9H6X4 195 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
EPHA4-214ENST00000541600 SLIT2O94813 1529 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 PPM1GO15355 546 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-214ENST00000541600 KDM4AO75164 1064 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 C7P10643 843 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
EPHA4-214ENST00000541600 C8orf34Q49A92 452 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-214ENST00000541600 UNC5CLQ8IV45 518 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 TRIM34Q9BYJ4 488 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 ALG2Q9H553 416 aa8.56□□□□□ -1.04
EPHA4-214ENST00000541600 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms