RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SFI1A8K8P3 1242 aa7.79□□□□□ -1.16
SNHG1-217ENST00000541578 SEC13P55735 322 aa7.79□□□□□ -1.16
SNHG1-217ENST00000541578 TEAD4Q15561 434 aa7.79□□□□□ -1.16
SNHG1-217ENST00000541578 CFAP70Q5T0N1 1121 aa7.79□□□□□ -1.16
SNHG1-217ENST00000541578 SLC9A9Q8IVB4 645 aa7.79□□□□□ -1.16
SNHG1-217ENST00000541578 CRISPLD1Q9H336 500 aa7.79□□□□□ -1.16
SNHG1-217ENST00000541578 PARP3Q9Y6F1 533 aa7.79□□□□□ -1.16
SNHG1-217ENST00000541578 DKK1O94907 266 aa7.78□□□□□ -1.16
SNHG1-217ENST00000541578 THBS1P07996 1170 aa7.78□□□□□ -1.16
SNHG1-217ENST00000541578 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-217ENST00000541578 ARSJQ5FYB0 599 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-217ENST00000541578 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
SNHG1-217ENST00000541578 TSEN2Q8NCE0 465 aaKnown RBP7.78□□□□□ -1.16
SNHG1-217ENST00000541578 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
SNHG1-217ENST00000541578 CFHR5Q9BXR6 569 aa7.78□□□□□ -1.16
SNHG1-217ENST00000541578 ZDHHC3Q9NYG2 299 aa7.78□□□□□ -1.16
SNHG1-217ENST00000541578 ZNF232Q9UNY5 417 aa7.78□□□□□ -1.16
SNHG1-217ENST00000541578 FAM196BA6NMK8 535 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 ADAMTS2O95450 1211 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 SLURP2P0DP57 97 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 ATP4AP20648 1035 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 NOS2P35228 1153 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 SRSF11Q05519 484 aaKnown RBP7.77□□□□□ -1.17
SNHG1-217ENST00000541578 PTK7Q13308 1070 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 CRTC2Q53ET0 693 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-217ENST00000541578 ZDHHC1Q8WTX9 485 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 MBIPQ9NS73 344 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 PHF24Q9UPV7 400 aa7.77□□□□□ -1.17
SNHG1-217ENST00000541578 SERTM1A2A2V5 107 aa7.76□□□□□ -1.17
SNHG1-217ENST00000541578 MX2P20592 715 aa7.76□□□□□ -1.17
SNHG1-217ENST00000541578 RFX1P22670 979 aa7.76□□□□□ -1.17
SNHG1-217ENST00000541578 DPYDQ12882 1025 aa7.76□□□□□ -1.17
SNHG1-217ENST00000541578 NLRP8Q86W28 1048 aa7.76□□□□□ -1.17
SNHG1-217ENST00000541578 ANKMY2Q8IV38 441 aa7.76□□□□□ -1.17
SNHG1-217ENST00000541578 TSPAN10Q9H1Z9 355 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-217ENST00000541578 NSFL1CQ9UNZ2 370 aaKnown RBP7.76□□□□□ -1.17
SNHG1-217ENST00000541578 CHMP3Q9Y3E7 222 aa7.76□□□□□ -1.17
SNHG1-217ENST00000541578 A0A1W2PNR3 127 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L15C9J2P7 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L10C9JJH3 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L13C9JLJ4 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L12C9JPN9 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L11C9JVI0 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L21D6R901 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L18D6R9N7 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L22D6RA61 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L17D6RBQ6 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L19D6RCP7 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L20D6RJB6 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 PSMA6P60900 246 aaKnown RBP7.75□□□□□ -1.17
SNHG1-217ENST00000541578 USP17L24Q0WX57 530 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 UBAP2LQ14157 1087 aaKnown RBP7.75□□□□□ -1.17
SNHG1-217ENST00000541578 CDCA8Q53HL2 280 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 FIGNL1Q6PIW4 674 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 BICDL1Q6ZP65 573 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 HINFPQ9BQA5 517 aa7.75□□□□□ -1.17
SNHG1-217ENST00000541578 ZCCHC2Q9C0B9 1178 aaKnown RBP7.75□□□□□ -1.17
SNHG1-217ENST00000541578 IGF1RP08069 1367 aa7.74□□□□□ -1.17
SNHG1-217ENST00000541578 TXLNAP40222 546 aa7.74□□□□□ -1.17
SNHG1-217ENST00000541578 ZIC5Q96T25 663 aa7.74□□□□□ -1.17
SNHG1-217ENST00000541578 ATXN7L1Q9ULK2 861 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-217ENST00000541578 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
SNHG1-217ENST00000541578 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
SNHG1-217ENST00000541578 PPP1R12BO60237 982 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-217ENST00000541578 BNIP3LO60238 219 aa7.73□□□□□ -1.17
SNHG1-217ENST00000541578 GAS2L2Q8NHY3 880 aa7.73□□□□□ -1.17
SNHG1-217ENST00000541578 CCDC97Q96F63 343 aaPredicted RBP7.73□□□□□ -1.17
SNHG1-217ENST00000541578 ABHD17AQ96GS6 310 aa7.73□□□□□ -1.17
SNHG1-217ENST00000541578 ATAD2Q6PL18 1390 aa7.72□□□□□ -1.17
SNHG1-217ENST00000541578 EML1O00423 815 aa7.72□□□□□ -1.17
SNHG1-217ENST00000541578 ATXN7O15265 892 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-217ENST00000541578 ZNF385CQ66K41 422 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-217ENST00000541578 SVOPQ8N4V2 548 aa7.72□□□□□ -1.17
SNHG1-217ENST00000541578 WHAMMQ8TF30 809 aa7.72□□□□□ -1.17
SNHG1-217ENST00000541578 SCG3Q8WXD2 468 aaKnown RBP7.72□□□□□ -1.17
SNHG1-217ENST00000541578 NEUROD4Q9HD90 331 aa7.72□□□□□ -1.17
SNHG1-217ENST00000541578 NDFIP2Q9NV92 336 aa7.72□□□□□ -1.17
SNHG1-217ENST00000541578 HCN4Q9Y3Q4 1203 aa7.72□□□□□ -1.17
SNHG1-217ENST00000541578 C21orf2O43822 256 aa7.71□□□□□ -1.18
SNHG1-217ENST00000541578 MAP2K3P46734 347 aa7.71□□□□□ -1.18
SNHG1-217ENST00000541578 HIRAP54198 1017 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-217ENST00000541578 SH3PXD2AQ5TCZ1 1133 aa7.71□□□□□ -1.18
SNHG1-217ENST00000541578 C1orf53Q5VUE5 145 aa7.71□□□□□ -1.18
SNHG1-217ENST00000541578 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
SNHG1-217ENST00000541578 FAM200AQ8TCP9 573 aa7.71□□□□□ -1.18
SNHG1-217ENST00000541578 SERPINA10Q9UK55 444 aa7.71□□□□□ -1.18
SNHG1-217ENST00000541578 ARID3CA6NKF2 412 aa7.7□□□□□ -1.18
SNHG1-217ENST00000541578 FGFR3P22607 806 aa7.7□□□□□ -1.18
SNHG1-217ENST00000541578 MAP3K10Q02779 954 aa7.7□□□□□ -1.18
SNHG1-217ENST00000541578 POTEAQ6S8J7 498 aa7.7□□□□□ -1.18
SNHG1-217ENST00000541578 LYPD4Q6UWN0 246 aa7.7□□□□□ -1.18
SNHG1-217ENST00000541578 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-217ENST00000541578 C7orf43Q8WVR3 580 aa7.7□□□□□ -1.18
SNHG1-217ENST00000541578 GPC6Q9Y625 555 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-217ENST00000541578 LGR5O75473 907 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 CELA2BP08218 269 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-217ENST00000541578 BMP4P12644 408 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 CTBSQ01459 385 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 TNP2Q05952 138 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 SAMD5Q5TGI4 173 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms