RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
DDB1-218ENST00000540784 UBR2Q8IWV8 1755 aa20.09■□□□□ 0.81
DDB1-218ENST00000540784 PHF14O94880 888 aa20.09■□□□□ 0.81
DDB1-218ENST00000540784 CANXP27824 592 aaKnown RBP20.09■□□□□ 0.81
DDB1-218ENST00000540784 SSFA2P28290 1259 aa20.09■□□□□ 0.81
DDB1-218ENST00000540784 KRT24Q2M2I5 525 aa20.09■□□□□ 0.81
DDB1-218ENST00000540784 SMIM5Q71RC9 77 aa20.09■□□□□ 0.81
DDB1-218ENST00000540784 C5P01031 1676 aa20.08■□□□□ 0.81
DDB1-218ENST00000540784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.08■□□□□ 0.81
DDB1-218ENST00000540784 EIF2S2P20042 333 aaKnown RBP20.08■□□□□ 0.81
DDB1-218ENST00000540784 COL23A1Q86Y22 540 aaPredicted RBP20.08■□□□□ 0.81
DDB1-218ENST00000540784 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
DDB1-218ENST00000540784 C4BP0C0L5 1744 aa20.07■□□□□ 0.8
DDB1-218ENST00000540784 PNPLA7Q6ZV29 1317 aa20.07■□□□□ 0.8
DDB1-218ENST00000540784 ELL2O00472 640 aaPredicted RBP20.07■□□□□ 0.8
DDB1-218ENST00000540784 DUSP27Q5VZP5 1158 aa20.07■□□□□ 0.8
DDB1-218ENST00000540784 ZBTB1Q9Y2K1 713 aa20.07■□□□□ 0.8
DDB1-218ENST00000540784 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
DDB1-218ENST00000540784 E9PSI1 815 aa20.06■□□□□ 0.8
DDB1-218ENST00000540784 ADRA2BP18089 450 aa20.06■□□□□ 0.8
DDB1-218ENST00000540784 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
DDB1-218ENST00000540784 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
DDB1-218ENST00000540784 C8orf58Q8NAV2 365 aa20.06■□□□□ 0.8
DDB1-218ENST00000540784 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
DDB1-218ENST00000540784 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
DDB1-218ENST00000540784 TAF1LQ8IZX4 1826 aa20.06■□□□□ 0.8
DDB1-218ENST00000540784 HOXB7P09629 217 aa20.05■□□□□ 0.8
DDB1-218ENST00000540784 RFC4P35249 363 aa20.05■□□□□ 0.8
DDB1-218ENST00000540784 TJP1Q07157 1748 aa20.05■□□□□ 0.8
DDB1-218ENST00000540784 FANCIQ9NVI1 1328 aa20.04■□□□□ 0.8
DDB1-218ENST00000540784 IL6STP40189 918 aaPredicted RBP20.04■□□□□ 0.8
DDB1-218ENST00000540784 EIF5P55010 431 aaKnown RBP20.04■□□□□ 0.8
DDB1-218ENST00000540784 SLFN5Q08AF3 891 aa20.04■□□□□ 0.8
DDB1-218ENST00000540784 SLC16A10Q8TF71 515 aa20.04■□□□□ 0.8
DDB1-218ENST00000540784 CHMP4AQ9BY43 222 aa20.04■□□□□ 0.8
DDB1-218ENST00000540784 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
DDB1-218ENST00000540784 A0A087WZG4 1122 aa20.03■□□□□ 0.8
DDB1-218ENST00000540784 PIP4K2AP48426 406 aaPredicted RBP20.03■□□□□ 0.8
DDB1-218ENST00000540784 NECTIN2Q92692 538 aa20.03■□□□□ 0.8
DDB1-218ENST00000540784 CDCA7LQ96GN5 454 aa20.03■□□□□ 0.8
DDB1-218ENST00000540784 ARXQ96QS3 562 aa20.03■□□□□ 0.8
DDB1-218ENST00000540784 ZNF330Q9Y3S2 320 aaPredicted RBP20.03■□□□□ 0.8
DDB1-218ENST00000540784 NBPF26B4DH59 902 aa20.02■□□□□ 0.8
DDB1-218ENST00000540784 EXOSC9Q06265 439 aaKnown RBP20.02■□□□□ 0.8
DDB1-218ENST00000540784 HDGFL1Q5TGJ6 251 aa20.02■□□□□ 0.8
DDB1-218ENST00000540784 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.8
DDB1-218ENST00000540784 NBPF15Q8N660 670 aa20.02■□□□□ 0.8
DDB1-218ENST00000540784 TSPYL6Q8N831 410 aa20.02■□□□□ 0.8
DDB1-218ENST00000540784 COL5A3P25940 1745 aaPredicted RBP20.02■□□□□ 0.79
DDB1-218ENST00000540784 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.79
DDB1-218ENST00000540784 ZBTB7AO95365 584 aa20.01■□□□□ 0.79
DDB1-218ENST00000540784 TWISTNBQ3B726 338 aaPredicted RBP20.01■□□□□ 0.79
DDB1-218ENST00000540784 ERBB4Q15303 1308 aa20.01■□□□□ 0.79
DDB1-218ENST00000540784 ZPR1O75312 459 aa20■□□□□ 0.79
DDB1-218ENST00000540784 MYL6BP14649 208 aa20■□□□□ 0.79
DDB1-218ENST00000540784 MYH14Q7Z406 1995 aaKnown RBP19.99■□□□□ 0.79
DDB1-218ENST00000540784 CCDC30Q5VVM6 783 aa19.99■□□□□ 0.79
DDB1-218ENST00000540784 TRMT2AQ8IZ69 625 aaKnown RBP19.99■□□□□ 0.79
DDB1-218ENST00000540784 MTFR1LQ9H019 292 aa19.99■□□□□ 0.79
DDB1-218ENST00000540784 ATF5Q9Y2D1 282 aaPredicted RBP19.99■□□□□ 0.79
DDB1-218ENST00000540784 PDIA6Q15084 440 aa19.98■□□□□ 0.79
DDB1-218ENST00000540784 DDX21Q9NR30 783 aaKnown RBP eCLIP19.98■□□□□ 0.79
DDB1-218ENST00000540784 DBF4Q9UBU7 674 aaPredicted RBP19.98■□□□□ 0.79
DDB1-218ENST00000540784 NARFQ9UHQ1 456 aa19.98■□□□□ 0.79
DDB1-218ENST00000540784 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
DDB1-218ENST00000540784 COL15A1P39059 1388 aa19.97■□□□□ 0.79
DDB1-218ENST00000540784 VAMP4O75379 141 aa19.97■□□□□ 0.79
DDB1-218ENST00000540784 NLGN1Q8N2Q7 840 aa19.97■□□□□ 0.79
DDB1-218ENST00000540784 SPON1Q9HCB6 807 aa19.97■□□□□ 0.79
DDB1-218ENST00000540784 CHPF2Q9P2E5 772 aa19.97■□□□□ 0.79
DDB1-218ENST00000540784 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
DDB1-218ENST00000540784 ZBED9Q6R2W3 1325 aa19.97■□□□□ 0.79
DDB1-218ENST00000540784 USPL1Q5W0Q7 1092 aa19.96■□□□□ 0.79
DDB1-218ENST00000540784 DZIP3Q86Y13 1208 aaKnown RBP19.96■□□□□ 0.79
DDB1-218ENST00000540784 UBR3Q6ZT12 1888 aa19.95■□□□□ 0.78
DDB1-218ENST00000540784 ANXA1P04083 346 aa19.95■□□□□ 0.78
DDB1-218ENST00000540784 PROSER3Q2NL68 480 aa19.95■□□□□ 0.78
DDB1-218ENST00000540784 HYPKQ9NX55 129 aa19.95■□□□□ 0.78
DDB1-218ENST00000540784 USP42Q9H9J4 1324 aaKnown RBP19.95■□□□□ 0.78
DDB1-218ENST00000540784 GYS1P13807 737 aa19.94■□□□□ 0.78
DDB1-218ENST00000540784 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
DDB1-218ENST00000540784 STK31Q9BXU1 1019 aa19.94■□□□□ 0.78
DDB1-218ENST00000540784 QSER1Q2KHR3 1735 aa19.93■□□□□ 0.78
DDB1-218ENST00000540784 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
DDB1-218ENST00000540784 KIF6Q6ZMV9 814 aa19.93■□□□□ 0.78
DDB1-218ENST00000540784 COPS6Q7L5N1 327 aa19.93■□□□□ 0.78
DDB1-218ENST00000540784 POLD1P28340 1107 aa19.92■□□□□ 0.78
DDB1-218ENST00000540784 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
DDB1-218ENST00000540784 TTLL7Q6ZT98 887 aa19.92■□□□□ 0.78
DDB1-218ENST00000540784 LRP10Q7Z4F1 713 aa19.92■□□□□ 0.78
DDB1-218ENST00000540784 TUBGCP6Q96RT7 1819 aa19.92■□□□□ 0.78
DDB1-218ENST00000540784 CAMTA2O94983 1202 aa19.91■□□□□ 0.78
DDB1-218ENST00000540784 SLC4A2P04920 1241 aa19.91■□□□□ 0.78
DDB1-218ENST00000540784 FKBP8Q14318 412 aa19.91■□□□□ 0.78
DDB1-218ENST00000540784 XAGE3Q8WTP9 111 aa19.91■□□□□ 0.78
DDB1-218ENST00000540784 LAMB4A4D0S4 1761 aa19.9■□□□□ 0.78
DDB1-218ENST00000540784 ERVV-1B6SEH8 477 aa19.9■□□□□ 0.78
DDB1-218ENST00000540784 BCL2L12Q9HB09 334 aa19.9■□□□□ 0.78
DDB1-218ENST00000540784 CASZ1Q86V15 1759 aa19.9■□□□□ 0.78
DDB1-218ENST00000540784 PTGER2P43116 358 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms