RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
GTF2H3-207ENST00000539429 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
GTF2H3-207ENST00000539429 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
GTF2H3-207ENST00000539429 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
GTF2H3-207ENST00000539429 EP400Q96L91 3159 aa12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 ERBB3P21860 1342 aa12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 SMG6Q86US8 1419 aaKnown RBP12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 PTPREP23469 700 aa12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 HOXC9P31274 260 aa12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 DDB1Q16531 1140 aa12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
GTF2H3-207ENST00000539429 EMP3P54852 163 aa12.9□□□□□ -0.34
GTF2H3-207ENST00000539429 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
GTF2H3-207ENST00000539429 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
GTF2H3-207ENST00000539429 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
GTF2H3-207ENST00000539429 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
GTF2H3-207ENST00000539429 RTL1A6NKG5 1358 aa12.89□□□□□ -0.35
GTF2H3-207ENST00000539429 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 EXOC5O00471 708 aa12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 TRIM66O15016 1216 aa12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 FAM196AQ6ZSG2 479 aa12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 MARVELD3Q96A59 401 aa12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 NSD2O96028 1365 aa12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 FLT4P35916 1363 aa12.88□□□□□ -0.35
GTF2H3-207ENST00000539429 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
GTF2H3-207ENST00000539429 IL2RBP14784 551 aa12.87□□□□□ -0.35
GTF2H3-207ENST00000539429 COL9A1P20849 921 aa12.87□□□□□ -0.35
GTF2H3-207ENST00000539429 BRPF1P55201 1214 aaPredicted RBP12.87□□□□□ -0.35
GTF2H3-207ENST00000539429 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
GTF2H3-207ENST00000539429 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
GTF2H3-207ENST00000539429 PEAK1Q9H792 1746 aa12.86□□□□□ -0.35
GTF2H3-207ENST00000539429 ZEB1P37275 1124 aaPredicted RBP12.86□□□□□ -0.35
GTF2H3-207ENST00000539429 PRSS12P56730 875 aa12.86□□□□□ -0.35
GTF2H3-207ENST00000539429 HSP90AB2PQ58FF8 381 aa12.86□□□□□ -0.35
GTF2H3-207ENST00000539429 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
GTF2H3-207ENST00000539429 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
GTF2H3-207ENST00000539429 TRIM37O94972 964 aa12.85□□□□□ -0.35
GTF2H3-207ENST00000539429 BAG6P46379 1132 aa12.85□□□□□ -0.35
GTF2H3-207ENST00000539429 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
GTF2H3-207ENST00000539429 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
GTF2H3-207ENST00000539429 INSRP06213 1382 aa12.84□□□□□ -0.35
GTF2H3-207ENST00000539429 TTC13Q8NBP0 860 aa12.84□□□□□ -0.35
GTF2H3-207ENST00000539429 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
GTF2H3-207ENST00000539429 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
GTF2H3-207ENST00000539429 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
GTF2H3-207ENST00000539429 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
GTF2H3-207ENST00000539429 SBF2Q86WG5 1849 aa12.83□□□□□ -0.35
GTF2H3-207ENST00000539429 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
GTF2H3-207ENST00000539429 PDE4DQ08499 809 aa12.83□□□□□ -0.36
GTF2H3-207ENST00000539429 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
GTF2H3-207ENST00000539429 USHBP1Q8N6Y0 703 aa12.83□□□□□ -0.36
GTF2H3-207ENST00000539429 APBA3O96018 575 aa12.82□□□□□ -0.36
GTF2H3-207ENST00000539429 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
GTF2H3-207ENST00000539429 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
GTF2H3-207ENST00000539429 DDX54Q8TDD1 881 aaKnown RBP12.82□□□□□ -0.36
GTF2H3-207ENST00000539429 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
GTF2H3-207ENST00000539429 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
GTF2H3-207ENST00000539429 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
GTF2H3-207ENST00000539429 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
GTF2H3-207ENST00000539429 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
GTF2H3-207ENST00000539429 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
GTF2H3-207ENST00000539429 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
GTF2H3-207ENST00000539429 ARHGAP33O14559 1287 aa12.79□□□□□ -0.36
GTF2H3-207ENST00000539429 AMHR2Q16671 573 aa12.79□□□□□ -0.36
GTF2H3-207ENST00000539429 ZNF687Q8N1G0 1237 aa12.79□□□□□ -0.36
GTF2H3-207ENST00000539429 ZCRB1Q8TBF4 217 aaKnown RBP12.79□□□□□ -0.36
GTF2H3-207ENST00000539429 PER1O15534 1290 aaPredicted RBP12.78□□□□□ -0.36
GTF2H3-207ENST00000539429 OATP04181 439 aa12.78□□□□□ -0.36
GTF2H3-207ENST00000539429 PBX2P40425 430 aa12.78□□□□□ -0.36
GTF2H3-207ENST00000539429 PSEN2P49810 448 aa12.78□□□□□ -0.36
GTF2H3-207ENST00000539429 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
GTF2H3-207ENST00000539429 ADGRG1Q9Y653 693 aa12.78□□□□□ -0.36
GTF2H3-207ENST00000539429 EIF4A2Q14240 407 aaKnown RBP12.77□□□□□ -0.37
GTF2H3-207ENST00000539429 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
GTF2H3-207ENST00000539429 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
GTF2H3-207ENST00000539429 SYTL4Q96C24 671 aaPredicted RBP12.77□□□□□ -0.37
GTF2H3-207ENST00000539429 HS3ST6Q96QI5 342 aa12.77□□□□□ -0.37
GTF2H3-207ENST00000539429 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.37
GTF2H3-207ENST00000539429 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
GTF2H3-207ENST00000539429 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
GTF2H3-207ENST00000539429 GPBP1L1Q9HC44 474 aaPredicted RBP12.76□□□□□ -0.37
GTF2H3-207ENST00000539429 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
GTF2H3-207ENST00000539429 MEGF6O75095 1541 aa12.76□□□□□ -0.37
GTF2H3-207ENST00000539429 MTHFSP49914 203 aa12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 METTL3Q86U44 580 aaKnown RBP12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 EYA1Q99502 592 aa12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 SPG7Q9UQ90 795 aa12.75□□□□□ -0.37
GTF2H3-207ENST00000539429 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
GTF2H3-207ENST00000539429 PROX2Q3B8N5 592 aa12.74□□□□□ -0.37
GTF2H3-207ENST00000539429 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
GTF2H3-207ENST00000539429 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
GTF2H3-207ENST00000539429 BTAF1O14981 1849 aa12.74□□□□□ -0.37
GTF2H3-207ENST00000539429 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms