RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
CHFR-216ENST00000538235 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
CHFR-216ENST00000538235 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
CHFR-216ENST00000538235 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.34
CHFR-216ENST00000538235 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
CHFR-216ENST00000538235 GIGYF1O75420 1035 aaPredicted RBP17.14■□□□□ 0.33
CHFR-216ENST00000538235 PHF14O94880 888 aa17.14■□□□□ 0.33
CHFR-216ENST00000538235 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
CHFR-216ENST00000538235 NBPF14Q5TI25 921 aa17.14■□□□□ 0.33
CHFR-216ENST00000538235 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
CHFR-216ENST00000538235 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
CHFR-216ENST00000538235 IFT57Q9NWB7 429 aa17.14■□□□□ 0.33
CHFR-216ENST00000538235 NUP98P52948 1817 aa17.14■□□□□ 0.33
CHFR-216ENST00000538235 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
CHFR-216ENST00000538235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
CHFR-216ENST00000538235 A1BGP04217 495 aa17.13■□□□□ 0.33
CHFR-216ENST00000538235 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
CHFR-216ENST00000538235 AK7Q96M32 723 aa17.13■□□□□ 0.33
CHFR-216ENST00000538235 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
CHFR-216ENST00000538235 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
CHFR-216ENST00000538235 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
CHFR-216ENST00000538235 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
CHFR-216ENST00000538235 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
CHFR-216ENST00000538235 COL15A1P39059 1388 aa17.12■□□□□ 0.33
CHFR-216ENST00000538235 ARFGEF2Q9Y6D5 1785 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 RPS6KA4O75676 772 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 SGIP1Q9BQI5 828 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
CHFR-216ENST00000538235 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
CHFR-216ENST00000538235 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
CHFR-216ENST00000538235 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
CHFR-216ENST00000538235 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
CHFR-216ENST00000538235 IL16Q14005 1332 aa17.1■□□□□ 0.33
CHFR-216ENST00000538235 ANXA1P04083 346 aa17.09■□□□□ 0.33
CHFR-216ENST00000538235 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
CHFR-216ENST00000538235 SSFA2P28290 1259 aa17.09■□□□□ 0.33
CHFR-216ENST00000538235 PTGER2P43116 358 aa17.09■□□□□ 0.33
CHFR-216ENST00000538235 PDIA6Q15084 440 aa17.09■□□□□ 0.33
CHFR-216ENST00000538235 MSL1Q68DK7 614 aa17.09■□□□□ 0.33
CHFR-216ENST00000538235 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
CHFR-216ENST00000538235 CDCA7LQ96GN5 454 aa17.09■□□□□ 0.33
CHFR-216ENST00000538235 KIF13BQ9NQT8 1826 aa17.09■□□□□ 0.33
CHFR-216ENST00000538235 EIF5P55010 431 aaKnown RBP17.08■□□□□ 0.32
CHFR-216ENST00000538235 GNAI1P63096 354 aa17.08■□□□□ 0.32
CHFR-216ENST00000538235 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.32
CHFR-216ENST00000538235 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
CHFR-216ENST00000538235 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
CHFR-216ENST00000538235 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
CHFR-216ENST00000538235 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
CHFR-216ENST00000538235 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
CHFR-216ENST00000538235 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
CHFR-216ENST00000538235 DUSP27Q5VZP5 1158 aa17.06■□□□□ 0.32
CHFR-216ENST00000538235 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
CHFR-216ENST00000538235 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
CHFR-216ENST00000538235 STARD3NLO95772 234 aa17.04■□□□□ 0.32
CHFR-216ENST00000538235 GYS1P13807 737 aa17.04■□□□□ 0.32
CHFR-216ENST00000538235 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
CHFR-216ENST00000538235 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
CHFR-216ENST00000538235 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
CHFR-216ENST00000538235 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
CHFR-216ENST00000538235 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
CHFR-216ENST00000538235 MTFR1LQ9H019 292 aa17.03■□□□□ 0.32
CHFR-216ENST00000538235 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
CHFR-216ENST00000538235 BRCA1P38398 1863 aaKnown RBP17.02■□□□□ 0.32
CHFR-216ENST00000538235 TNRC6CQ9HCJ0 1690 aaKnown RBP17.02■□□□□ 0.32
CHFR-216ENST00000538235 MSH5O43196 834 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 ADRA2BP18089 450 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 HNRNPUQ00839 825 aaKnown RBP eCLIP17.02■□□□□ 0.32
CHFR-216ENST00000538235 SLFN5Q08AF3 891 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 FKBP8Q14318 412 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 USPL1Q5W0Q7 1092 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
CHFR-216ENST00000538235 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
CHFR-216ENST00000538235 ZNF330Q9Y3S2 320 aaPredicted RBP17.02■□□□□ 0.32
CHFR-216ENST00000538235 N4BP2Q86UW6 1770 aaPredicted RBP17.02■□□□□ 0.31
CHFR-216ENST00000538235 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
CHFR-216ENST00000538235 MYL6BP14649 208 aa17.01■□□□□ 0.31
CHFR-216ENST00000538235 DDR1Q08345 913 aa17.01■□□□□ 0.31
CHFR-216ENST00000538235 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
CHFR-216ENST00000538235 NGEFQ8N5V2 710 aa17.01■□□□□ 0.31
CHFR-216ENST00000538235 HOXB7P09629 217 aa17■□□□□ 0.31
CHFR-216ENST00000538235 HDGFL1Q5TGJ6 251 aa17■□□□□ 0.31
CHFR-216ENST00000538235 NARFQ9UHQ1 456 aa17■□□□□ 0.31
CHFR-216ENST00000538235 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
CHFR-216ENST00000538235 FLAD1Q8NFF5 587 aa16.99■□□□□ 0.31
CHFR-216ENST00000538235 SLC16A10Q8TF71 515 aa16.99■□□□□ 0.31
CHFR-216ENST00000538235 LAMB2P55268 1798 aa16.99■□□□□ 0.31
CHFR-216ENST00000538235 DLEC1Q9Y238 1755 aa16.99■□□□□ 0.31
CHFR-216ENST00000538235 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
CHFR-216ENST00000538235 VAMP4O75379 141 aa16.98■□□□□ 0.31
CHFR-216ENST00000538235 RFC4P35249 363 aa16.98■□□□□ 0.31
CHFR-216ENST00000538235 HLFQ16534 295 aa16.98■□□□□ 0.31
CHFR-216ENST00000538235 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms