RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 TRIM35Q9UPQ4 493 aa30.29■■■□□ 2.44
CLTA-209ENST00000538225 ADRA2BP18089 450 aa30.27■■■□□ 2.44
CLTA-209ENST00000538225 ARXQ96QS3 562 aa30.27■■■□□ 2.44
CLTA-209ENST00000538225 RFC4P35249 363 aa30.26■■■□□ 2.43
CLTA-209ENST00000538225 ZBTB1Q9Y2K1 713 aa30.26■■■□□ 2.43
CLTA-209ENST00000538225 PRAMEF22A3QJZ6 481 aa30.25■■■□□ 2.43
CLTA-209ENST00000538225 CANXP27824 592 aaKnown RBP30.25■■■□□ 2.43
CLTA-209ENST00000538225 SNRPA1P09661 255 aaKnown RBP30.24■■■□□ 2.43
CLTA-209ENST00000538225 SENP3-EIF4A1A0A087X0R7 540 aa30.23■■■□□ 2.43
CLTA-209ENST00000538225 TSPYL4Q9UJ04 414 aa30.23■■■□□ 2.43
CLTA-209ENST00000538225 USP16Q9Y5T5 823 aa30.23■■■□□ 2.43
CLTA-209ENST00000538225 SOS1Q07889 1333 aaPredicted RBP30.22■■■□□ 2.43
CLTA-209ENST00000538225 A1BGP04217 495 aa30.21■■■□□ 2.43
CLTA-209ENST00000538225 LAS1LQ9Y4W2 734 aaKnown RBP30.21■■■□□ 2.43
CLTA-209ENST00000538225 EIF4A1P60842 406 aaKnown RBP30.2■■■□□ 2.43
CLTA-209ENST00000538225 COL24A1Q17RW2 1714 aa30.19■■■□□ 2.42
CLTA-209ENST00000538225 KDM3BQ7LBC6 1761 aa30.19■■■□□ 2.42
CLTA-209ENST00000538225 FAM9BQ8IZU0 186 aa30.19■■■□□ 2.42
CLTA-209ENST00000538225 FHDC1Q9C0D6 1143 aaPredicted RBP30.19■■■□□ 2.42
CLTA-209ENST00000538225 SRP68Q9UHB9 627 aaKnown RBP30.19■■■□□ 2.42
CLTA-209ENST00000538225 KLHL34Q8N239 644 aa30.18■■■□□ 2.42
CLTA-209ENST00000538225 GYS1P13807 737 aa30.17■■■□□ 2.42
CLTA-209ENST00000538225 BABAM1Q9NWV8 329 aa30.17■■■□□ 2.42
CLTA-209ENST00000538225 ZNF330Q9Y3S2 320 aaPredicted RBP30.17■■■□□ 2.42
CLTA-209ENST00000538225 COL15A1P39059 1388 aa30.15■■■□□ 2.42
CLTA-209ENST00000538225 GIGYF1O75420 1035 aaPredicted RBP30.15■■■□□ 2.42
CLTA-209ENST00000538225 PIP4K2AP48426 406 aaPredicted RBP30.15■■■□□ 2.42
CLTA-209ENST00000538225 NLGN1Q8N2Q7 840 aa30.15■■■□□ 2.42
CLTA-209ENST00000538225 C4AP0C0L4 1744 aa30.15■■■□□ 2.42
CLTA-209ENST00000538225 USP42Q9H9J4 1324 aaKnown RBP30.15■■■□□ 2.42
CLTA-209ENST00000538225 CHL1O00533 1208 aa30.14■■■□□ 2.42
CLTA-209ENST00000538225 ZPR1O75312 459 aa30.14■■■□□ 2.42
CLTA-209ENST00000538225 EIF5P55010 431 aaKnown RBP30.14■■■□□ 2.42
CLTA-209ENST00000538225 SYT17Q9BSW7 474 aa30.14■■■□□ 2.42
CLTA-209ENST00000538225 MMP10P09238 476 aa30.12■■■□□ 2.41
CLTA-209ENST00000538225 IL6STP40189 918 aaPredicted RBP30.12■■■□□ 2.41
CLTA-209ENST00000538225 USPL1Q5W0Q7 1092 aa30.12■■■□□ 2.41
CLTA-209ENST00000538225 FKBP8Q14318 412 aa30.11■■■□□ 2.41
CLTA-209ENST00000538225 NARFQ9UHQ1 456 aa30.11■■■□□ 2.41
CLTA-209ENST00000538225 A0A087WZG4 1122 aa30.1■■■□□ 2.41
CLTA-209ENST00000538225 NPM2Q86SE8 214 aaKnown RBP30.1■■■□□ 2.41
CLTA-209ENST00000538225 DIEXFQ68CQ4 756 aaKnown RBP30.09■■■□□ 2.41
CLTA-209ENST00000538225 CFAP44Q96MT7 982 aa30.09■■■□□ 2.41
CLTA-209ENST00000538225 CALD1Q05682 793 aaKnown RBP30.08■■■□□ 2.41
CLTA-209ENST00000538225 TBC1D2BQ9UPU7 963 aa30.08■■■□□ 2.41
CLTA-209ENST00000538225 NBPF26B4DH59 902 aa30.07■■■□□ 2.4
CLTA-209ENST00000538225 NBPF10Q6P3W6 841 aaKnown RBP30.07■■■□□ 2.4
CLTA-209ENST00000538225 NBPF15Q8N660 670 aa30.07■■■□□ 2.4
CLTA-209ENST00000538225 SALL2Q9Y467 1007 aaPredicted RBP30.07■■■□□ 2.4
CLTA-209ENST00000538225 KRT24Q2M2I5 525 aa30.05■■■□□ 2.4
CLTA-209ENST00000538225 MBIPQ9NS73 344 aa30.05■■■□□ 2.4
CLTA-209ENST00000538225 ZNF853P0CG23 659 aa30.04■■■□□ 2.4
CLTA-209ENST00000538225 CCDC27Q2M243 656 aa30.04■■■□□ 2.4
CLTA-209ENST00000538225 WWC1Q8IX03 1113 aa30.04■■■□□ 2.4
CLTA-209ENST00000538225 BCL2L12Q9HB09 334 aa30.04■■■□□ 2.4
CLTA-209ENST00000538225 IFT57Q9NWB7 429 aa30.04■■■□□ 2.4
CLTA-209ENST00000538225 PARP3Q9Y6F1 533 aa30.04■■■□□ 2.4
CLTA-209ENST00000538225 EIF2S2P20042 333 aaKnown RBP30.03■■■□□ 2.4
CLTA-209ENST00000538225 GNAI1P63096 354 aa30.03■■■□□ 2.4
CLTA-209ENST00000538225 LAMB4A4D0S4 1761 aa30.03■■■□□ 2.4
CLTA-209ENST00000538225 DZIP3Q86Y13 1208 aaKnown RBP30.02■■■□□ 2.4
CLTA-209ENST00000538225 NLGN2Q8NFZ4 835 aa30.02■■■□□ 2.4
CLTA-209ENST00000538225 CCER2I3L3R5 266 aa30.01■■■□□ 2.39
CLTA-209ENST00000538225 NGEFQ8N5V2 710 aa30.01■■■□□ 2.39
CLTA-209ENST00000538225 CD2APQ9Y5K6 639 aa30.01■■■□□ 2.39
CLTA-209ENST00000538225 MYL6BP14649 208 aa30■■■□□ 2.39
CLTA-209ENST00000538225 TM4SF1P30408 202 aa30■■■□□ 2.39
CLTA-209ENST00000538225 DDR1Q08345 913 aa30■■■□□ 2.39
CLTA-209ENST00000538225 NFIXQ14938 502 aa29.99■■■□□ 2.39
CLTA-209ENST00000538225 NECTIN2Q92692 538 aa29.99■■■□□ 2.39
CLTA-209ENST00000538225 CAMTA2O94983 1202 aa29.98■■■□□ 2.39
CLTA-209ENST00000538225 NCBP3Q53F19 620 aaKnown RBP29.98■■■□□ 2.39
CLTA-209ENST00000538225 BICDL1Q6ZP65 573 aa29.98■■■□□ 2.39
CLTA-209ENST00000538225 POLRMTO00411 1230 aaKnown RBP29.96■■■□□ 2.39
CLTA-209ENST00000538225 DCAF8L1A6NGE4 600 aa29.95■■■□□ 2.39
CLTA-209ENST00000538225 DUSP27Q5VZP5 1158 aa29.95■■■□□ 2.39
CLTA-209ENST00000538225 TBC1D9BQ66K14 1250 aa29.95■■■□□ 2.39
CLTA-209ENST00000538225 MIER1Q8N108 512 aa29.95■■■□□ 2.39
CLTA-209ENST00000538225 ERBB4Q15303 1308 aa29.94■■■□□ 2.38
CLTA-209ENST00000538225 TSR2Q969E8 191 aaKnown RBP29.93■■■□□ 2.38
CLTA-209ENST00000538225 ELL2O00472 640 aaPredicted RBP29.92■■■□□ 2.38
CLTA-209ENST00000538225 ANXA1P04083 346 aa29.92■■■□□ 2.38
CLTA-209ENST00000538225 PDIA6Q15084 440 aa29.92■■■□□ 2.38
CLTA-209ENST00000538225 SCN7AQ01118 1682 aa29.91■■■□□ 2.38
CLTA-209ENST00000538225 HOXB7P09629 217 aa29.91■■■□□ 2.38
CLTA-209ENST00000538225 PROSER3Q2NL68 480 aa29.91■■■□□ 2.38
CLTA-209ENST00000538225 SERPINB2P05120 415 aa29.9■■■□□ 2.38
CLTA-209ENST00000538225 HDGFL1Q5TGJ6 251 aa29.9■■■□□ 2.38
CLTA-209ENST00000538225 TTLL7Q6ZT98 887 aa29.9■■■□□ 2.38
CLTA-209ENST00000538225 WDR63Q8IWG1 891 aa29.9■■■□□ 2.38
CLTA-209ENST00000538225 PELP1Q8IZL8 1130 aaKnown RBP29.9■■■□□ 2.38
CLTA-209ENST00000538225 IL16Q14005 1332 aa29.9■■■□□ 2.38
CLTA-209ENST00000538225 KIF6Q6ZMV9 814 aa29.89■■■□□ 2.38
CLTA-209ENST00000538225 C8orf58Q8NAV2 365 aa29.89■■■□□ 2.38
CLTA-209ENST00000538225 ZNF652Q9Y2D9 606 aa29.89■■■□□ 2.38
CLTA-209ENST00000538225 C10orf71Q711Q0 1435 aa29.88■■■□□ 2.37
CLTA-209ENST00000538225 HLFQ16534 295 aa29.88■■■□□ 2.37
CLTA-209ENST00000538225 CLEC4GQ6UXB4 293 aa29.88■■■□□ 2.37
CLTA-209ENST00000538225 SETDB2Q96T68 719 aa29.88■■■□□ 2.37
CLTA-209ENST00000538225 GPR162Q16538 588 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms